RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 PLIN2Q99541 437 aa17.13■□□□□ 0.33
NCK1-201ENST00000288986 KIAA1468Q9P260 1216 aa17.13■□□□□ 0.33
NCK1-201ENST00000288986 NR2E3Q9Y5X4 410 aa17.13■□□□□ 0.33
NCK1-201ENST00000288986 COL1A2P08123 1366 aa17.13■□□□□ 0.33
NCK1-201ENST00000288986 ACTN4O43707 911 aaKnown RBP17.13■□□□□ 0.33
NCK1-201ENST00000288986 MUTP22033 750 aa17.13■□□□□ 0.33
NCK1-201ENST00000288986 MDM2Q00987 491 aaPredicted RBP17.13■□□□□ 0.33
NCK1-201ENST00000288986 PTK7Q13308 1070 aa17.13■□□□□ 0.33
NCK1-201ENST00000288986 METTL13Q8N6R0 699 aa17.13■□□□□ 0.33
NCK1-201ENST00000288986 CALML4Q96GE6 196 aa17.13■□□□□ 0.33
NCK1-201ENST00000288986 PDLIM7Q9NR12 457 aa17.13■□□□□ 0.33
NCK1-201ENST00000288986 CYP26B1Q9NR63 512 aa17.13■□□□□ 0.33
NCK1-201ENST00000288986 KAT6AQ92794 2004 aa17.12■□□□□ 0.33
NCK1-201ENST00000288986 MBLAC1A4D2B0 266 aaPredicted RBP17.12■□□□□ 0.33
NCK1-201ENST00000288986 POLR2DO15514 142 aaKnown RBP17.12■□□□□ 0.33
NCK1-201ENST00000288986 SYN1P17600 705 aa17.12■□□□□ 0.33
NCK1-201ENST00000288986 TBC1D8BQ0IIM8 1120 aa17.12■□□□□ 0.33
NCK1-201ENST00000288986 SASS6Q6UVJ0 657 aa17.12■□□□□ 0.33
NCK1-201ENST00000288986 SERINC5Q86VE9 423 aa17.12■□□□□ 0.33
NCK1-201ENST00000288986 NT5C3AQ9H0P0 336 aa17.12■□□□□ 0.33
NCK1-201ENST00000288986 USP25Q9UHP3 1055 aa17.12■□□□□ 0.33
NCK1-201ENST00000288986 DNM3Q9UQ16 869 aa17.12■□□□□ 0.33
NCK1-201ENST00000288986 KDM3AQ9Y4C1 1321 aa17.12■□□□□ 0.33
NCK1-201ENST00000288986 TRIM43BA6NCK2 446 aa17.11■□□□□ 0.33
NCK1-201ENST00000288986 TXLNAP40222 546 aa17.11■□□□□ 0.33
NCK1-201ENST00000288986 TARBP2Q15633 366 aaKnown RBP17.11■□□□□ 0.33
NCK1-201ENST00000288986 TRIM43Q96BQ3 446 aaPredicted RBP17.11■□□□□ 0.33
NCK1-201ENST00000288986 PPP1R12CQ9BZL4 782 aa17.11■□□□□ 0.33
NCK1-201ENST00000288986 CCSER1Q9C0I3 900 aa17.11■□□□□ 0.33
NCK1-201ENST00000288986 HIPK3Q9H422 1215 aa17.11■□□□□ 0.33
NCK1-201ENST00000288986 SUGCTQ9HAC7 445 aa17.11■□□□□ 0.33
NCK1-201ENST00000288986 ANKEF1Q9NU02 776 aa17.11■□□□□ 0.33
NCK1-201ENST00000288986 ZMYND8Q9ULU4 1186 aaPredicted RBP17.11■□□□□ 0.33
NCK1-201ENST00000288986 WDR81Q562E7 1941 aa17.11■□□□□ 0.33
NCK1-201ENST00000288986 MAGEB2O15479 319 aa17.11■□□□□ 0.33
NCK1-201ENST00000288986 RAG1P15918 1043 aa17.11■□□□□ 0.33
NCK1-201ENST00000288986 KARSQ15046 597 aaKnown RBP17.11■□□□□ 0.33
NCK1-201ENST00000288986 E2F4Q16254 413 aa17.11■□□□□ 0.33
NCK1-201ENST00000288986 EFCAB12Q6NXP0 572 aa17.11■□□□□ 0.33
NCK1-201ENST00000288986 TAF2Q6P1X5 1199 aa17.11■□□□□ 0.33
NCK1-201ENST00000288986 RUFY4Q6ZNE9 571 aa17.11■□□□□ 0.33
NCK1-201ENST00000288986 RETREG2Q8NC44 543 aa17.11■□□□□ 0.33
NCK1-201ENST00000288986 CNNM3Q8NE01 707 aa17.11■□□□□ 0.33
NCK1-201ENST00000288986 PYM1Q9BRP8 204 aaKnown RBP17.11■□□□□ 0.33
NCK1-201ENST00000288986 PCDH10Q9P2E7 1040 aa17.11■□□□□ 0.33
NCK1-201ENST00000288986 SERTAD1Q9UHV2 236 aa17.11■□□□□ 0.33
NCK1-201ENST00000288986 TBX21Q9UL17 535 aa17.11■□□□□ 0.33
NCK1-201ENST00000288986 PCDHA2Q9Y5H9 948 aa17.11■□□□□ 0.33
NCK1-201ENST00000288986 E9PMD0 336 aa17.1■□□□□ 0.33
NCK1-201ENST00000288986 C22orf31O95567 290 aa17.1■□□□□ 0.33
NCK1-201ENST00000288986 THPOP40225 353 aa17.1■□□□□ 0.33
NCK1-201ENST00000288986 RARRES1P49788 294 aa17.1■□□□□ 0.33
NCK1-201ENST00000288986 GRB10Q13322 594 aa17.1■□□□□ 0.33
NCK1-201ENST00000288986 BFSP2Q13515 415 aa17.1■□□□□ 0.33
NCK1-201ENST00000288986 UVSSAQ2YD98 709 aa17.1■□□□□ 0.33
NCK1-201ENST00000288986 KANK3Q6NY19 840 aa17.1■□□□□ 0.33
NCK1-201ENST00000288986 DNAJB3Q8WWF6 145 aa17.1■□□□□ 0.33
NCK1-201ENST00000288986 SLC7A3Q8WY07 619 aa17.1■□□□□ 0.33
NCK1-201ENST00000288986 DHX38Q92620 1227 aaKnown RBP17.1■□□□□ 0.33
NCK1-201ENST00000288986 WNT8BQ93098 351 aa17.1■□□□□ 0.33
NCK1-201ENST00000288986 PNMA5Q96PV4 448 aa17.1■□□□□ 0.33
NCK1-201ENST00000288986 FAM49AQ9H0Q0 323 aaPredicted RBP17.1■□□□□ 0.33
NCK1-201ENST00000288986 BMP2KQ9NSY1 1161 aaPredicted RBP17.1■□□□□ 0.33
NCK1-201ENST00000288986 CCDC39Q9UFE4 941 aa17.1■□□□□ 0.33
NCK1-201ENST00000288986 TRIP12Q14669 1992 aaPredicted RBP17.1■□□□□ 0.33
NCK1-201ENST00000288986 KIAA0355O15063 1070 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 CAVIN2O95810 425 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 SLFN14P0C7P3 912 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 TMOD1P28289 359 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 POLGP54098 1239 aaPredicted RBP17.09■□□□□ 0.33
NCK1-201ENST00000288986 HYIQ5T013 277 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 LRRC71Q8N4P6 559 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 CCDC155Q8N6L0 562 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 CAGE1Q8TC20 777 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 NOC4LQ9BVI4 516 aaKnown RBP17.09■□□□□ 0.33
NCK1-201ENST00000288986 PANK2Q9BZ23 570 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 BHMT2Q9H2M3 363 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 DBR1Q9UK59 544 aaKnown RBP17.09■□□□□ 0.33
NCK1-201ENST00000288986 ALPK3Q96L96 1907 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 SMIM35A0A1B0GVV1 85 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 ARHGEF35A5YM69 484 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 MAFO75444 373 aaPredicted RBP17.09■□□□□ 0.33
NCK1-201ENST00000288986 CKBP12277 381 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 ITGB8P26012 769 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 STX1AQ16623 288 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 KCNK18Q7Z418 384 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 RSPH3Q86UC2 560 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 EXOC8Q8IYI6 725 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 PDILTQ8N807 584 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 FAM200AQ8TCP9 573 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 ERCC4Q92889 916 aaPredicted RBP17.09■□□□□ 0.33
NCK1-201ENST00000288986 CEP89Q96ST8 783 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 PPME1Q9Y570 386 aa17.09■□□□□ 0.33
NCK1-201ENST00000288986 SLC26A4O43511 780 aa17.08■□□□□ 0.33
NCK1-201ENST00000288986 TIMP1P01033 207 aa17.08■□□□□ 0.33
NCK1-201ENST00000288986 CYP2C18P33260 490 aa17.08■□□□□ 0.33
NCK1-201ENST00000288986 CCL23P55773 120 aa17.08■□□□□ 0.33
NCK1-201ENST00000288986 ANO6Q4KMQ2 910 aa17.08■□□□□ 0.33
NCK1-201ENST00000288986 NT5DC1Q5TFE4 455 aa17.08■□□□□ 0.33
NCK1-201ENST00000288986 KCTD17Q8N5Z5 321 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms