RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 CGNQ9P2M7 1197 aaKnown RBP19.68■□□□□ 0.74
CAPN1-201ENST00000279247 CSADQ9Y600 493 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 DOCK1Q14185 1865 aa19.67■□□□□ 0.74
CAPN1-201ENST00000279247 CCDC169A6NNP5 214 aa19.67■□□□□ 0.74
CAPN1-201ENST00000279247 SLC16A4O15374 487 aa19.67■□□□□ 0.74
CAPN1-201ENST00000279247 EXOC3O60645 756 aa19.67■□□□□ 0.74
CAPN1-201ENST00000279247 EPHX2P34913 555 aa19.67■□□□□ 0.74
CAPN1-201ENST00000279247 CCDC170Q8IYT3 715 aa19.67■□□□□ 0.74
CAPN1-201ENST00000279247 REPS2Q8NFH8 660 aa19.67■□□□□ 0.74
CAPN1-201ENST00000279247 GCNT4Q9P109 453 aa19.67■□□□□ 0.74
CAPN1-201ENST00000279247 CEP72Q9P209 647 aa19.67■□□□□ 0.74
CAPN1-201ENST00000279247 GABBR1Q9UBS5 961 aa19.67■□□□□ 0.74
CAPN1-201ENST00000279247 CLEC11AQ9Y240 323 aa19.67■□□□□ 0.74
CAPN1-201ENST00000279247 PCDHA13Q9Y5I0 950 aa19.67■□□□□ 0.74
CAPN1-201ENST00000279247 FHOD1Q9Y613 1164 aa19.67■□□□□ 0.74
CAPN1-201ENST00000279247 BUB1O43683 1085 aa19.67■□□□□ 0.74
CAPN1-201ENST00000279247 ACAD9Q9H845 621 aa19.67■□□□□ 0.74
CAPN1-201ENST00000279247 CYP39A1Q9NYL5 469 aa19.67■□□□□ 0.74
CAPN1-201ENST00000279247 FAM184BQ9ULE4 1060 aa19.67■□□□□ 0.74
CAPN1-201ENST00000279247 SNCAIPQ9Y6H5 919 aa19.67■□□□□ 0.74
CAPN1-201ENST00000279247 MAGEA1P43355 309 aa19.66■□□□□ 0.74
CAPN1-201ENST00000279247 FRMD5Q7Z6J6 570 aa19.66■□□□□ 0.74
CAPN1-201ENST00000279247 MTERF4Q7Z6M4 381 aaKnown RBP19.66■□□□□ 0.74
CAPN1-201ENST00000279247 VSIG10LQ86VR7 867 aa19.66■□□□□ 0.74
CAPN1-201ENST00000279247 NSUN6Q8TEA1 469 aaKnown RBP19.66■□□□□ 0.74
CAPN1-201ENST00000279247 LARSQ9P2J5 1176 aaKnown RBP19.66■□□□□ 0.74
CAPN1-201ENST00000279247 CDC23Q9UJX2 597 aa19.66■□□□□ 0.74
CAPN1-201ENST00000279247 WDR64B1ANS9 1081 aa19.66■□□□□ 0.74
CAPN1-201ENST00000279247 MOCS3O95396 460 aa19.66■□□□□ 0.74
CAPN1-201ENST00000279247 WDR78Q5VTH9 848 aa19.66■□□□□ 0.74
CAPN1-201ENST00000279247 SWSAP1Q6NVH7 229 aa19.66■□□□□ 0.74
CAPN1-201ENST00000279247 SEPT14Q6ZU15 432 aa19.66■□□□□ 0.74
CAPN1-201ENST00000279247 ZSWIM2Q8NEG5 633 aa19.66■□□□□ 0.74
CAPN1-201ENST00000279247 SLC35C1Q96A29 364 aa19.66■□□□□ 0.74
CAPN1-201ENST00000279247 AGPAT3Q9NRZ7 376 aa19.66■□□□□ 0.74
CAPN1-201ENST00000279247 ADAMTS1Q9UHI8 967 aa19.66■□□□□ 0.74
CAPN1-201ENST00000279247 PPP1R12BO60237 982 aaPredicted RBP19.65■□□□□ 0.74
CAPN1-201ENST00000279247 RGS20O76081 388 aa19.65■□□□□ 0.74
CAPN1-201ENST00000279247 CHMP4BP1P59074 171 aa19.65■□□□□ 0.74
CAPN1-201ENST00000279247 KLHL30Q0D2K2 578 aa19.65■□□□□ 0.74
CAPN1-201ENST00000279247 SLC9C1Q4G0N8 1177 aa19.65■□□□□ 0.74
CAPN1-201ENST00000279247 DOCK5Q9H7D0 1870 aa19.65■□□□□ 0.74
CAPN1-201ENST00000279247 GOLGA8IPA6NC78 632 aa19.65■□□□□ 0.74
CAPN1-201ENST00000279247 GOLGA8JA6NMD2 632 aa19.65■□□□□ 0.74
CAPN1-201ENST00000279247 IRF6O14896 467 aa19.65■□□□□ 0.74
CAPN1-201ENST00000279247 NCAPG2Q86XI2 1143 aa19.65■□□□□ 0.74
CAPN1-201ENST00000279247 R3HDMLQ9H3Y0 253 aa19.65■□□□□ 0.74
CAPN1-201ENST00000279247 HOXC10Q9NYD6 342 aa19.65■□□□□ 0.74
CAPN1-201ENST00000279247 ODF2LQ9ULJ1 636 aa19.65■□□□□ 0.74
CAPN1-201ENST00000279247 FRMD4BQ9Y2L6 1034 aa19.65■□□□□ 0.74
CAPN1-201ENST00000279247 EFCAB8A8MWE9 144 aa19.65■□□□□ 0.74
CAPN1-201ENST00000279247 RHOXF2BP0C7M4 288 aa19.65■□□□□ 0.74
CAPN1-201ENST00000279247 PON1P27169 355 aa19.65■□□□□ 0.74
CAPN1-201ENST00000279247 VAV2P52735 878 aa19.65■□□□□ 0.74
CAPN1-201ENST00000279247 BMT2Q1RMZ1 405 aa19.65■□□□□ 0.74
CAPN1-201ENST00000279247 MAP1SQ66K74 1059 aaPredicted RBP19.65■□□□□ 0.74
CAPN1-201ENST00000279247 RHOXF2Q9BQY4 288 aa19.65■□□□□ 0.74
CAPN1-201ENST00000279247 AJAP1Q9UKB5 411 aaPredicted RBP19.65■□□□□ 0.74
CAPN1-201ENST00000279247 CAPN6Q9Y6Q1 641 aa19.65■□□□□ 0.74
CAPN1-201ENST00000279247 HOXA7P31268 230 aaPredicted RBP19.64■□□□□ 0.73
CAPN1-201ENST00000279247 PSMC2P35998 433 aaKnown RBP19.64■□□□□ 0.73
CAPN1-201ENST00000279247 MARSP56192 900 aaKnown RBP19.64■□□□□ 0.73
CAPN1-201ENST00000279247 PSMC5P62195 406 aa19.64■□□□□ 0.73
CAPN1-201ENST00000279247 PTPROQ16827 1216 aa19.64■□□□□ 0.73
CAPN1-201ENST00000279247 STXBP4Q6ZWJ1 553 aa19.64■□□□□ 0.73
CAPN1-201ENST00000279247 SECISBP2LQ93073 1101 aaKnown RBP19.64■□□□□ 0.73
CAPN1-201ENST00000279247 CBWD1Q9BRT8 395 aa19.64■□□□□ 0.73
CAPN1-201ENST00000279247 MYO6Q9UM54 1294 aa19.64■□□□□ 0.73
CAPN1-201ENST00000279247 DICER1Q9UPY3 1922 aaKnown RBP19.64■□□□□ 0.73
CAPN1-201ENST00000279247 ZNF185O15231 689 aa19.64■□□□□ 0.73
CAPN1-201ENST00000279247 SEC31AO94979 1220 aaKnown RBP19.64■□□□□ 0.73
CAPN1-201ENST00000279247 UCHL3P15374 230 aa19.64■□□□□ 0.73
CAPN1-201ENST00000279247 GUCY2CP25092 1073 aa19.64■□□□□ 0.73
CAPN1-201ENST00000279247 ZNF131P52739 623 aa19.64■□□□□ 0.73
CAPN1-201ENST00000279247 HGSNATQ68CP4 663 aa19.64■□□□□ 0.73
CAPN1-201ENST00000279247 NIPA1Q7RTP0 329 aa19.64■□□□□ 0.73
CAPN1-201ENST00000279247 NEK9Q8TD19 979 aa19.64■□□□□ 0.73
CAPN1-201ENST00000279247 CEP170P1Q96L14 293 aa19.64■□□□□ 0.73
CAPN1-201ENST00000279247 RBBP6Q7Z6E9 1792 aaKnown RBP19.63■□□□□ 0.73
CAPN1-201ENST00000279247 EIF3DO15371 548 aaKnown RBP eCLIP19.63■□□□□ 0.73
CAPN1-201ENST00000279247 TEX2Q8IWB9 1127 aa19.63■□□□□ 0.73
CAPN1-201ENST00000279247 USP20Q9Y2K6 914 aa19.63■□□□□ 0.73
CAPN1-201ENST00000279247 CLCN6P51797 869 aa19.63■□□□□ 0.73
CAPN1-201ENST00000279247 ASIC2Q16515 512 aa19.63■□□□□ 0.73
CAPN1-201ENST00000279247 FOXR2Q6PJQ5 311 aa19.63■□□□□ 0.73
CAPN1-201ENST00000279247 ANO5Q75V66 913 aa19.63■□□□□ 0.73
CAPN1-201ENST00000279247 ZC3H3Q8IXZ2 948 aaKnown RBP19.63■□□□□ 0.73
CAPN1-201ENST00000279247 HINFPQ9BQA5 517 aa19.63■□□□□ 0.73
CAPN1-201ENST00000279247 SEPT9Q9UHD8 586 aaPredicted RBP19.63■□□□□ 0.73
CAPN1-201ENST00000279247 SALL4Q9UJQ4 1053 aa19.63■□□□□ 0.73
CAPN1-201ENST00000279247 KIAA1217Q5T5P2 1943 aa19.63■□□□□ 0.73
CAPN1-201ENST00000279247 PHIPQ8WWQ0 1821 aa19.63■□□□□ 0.73
CAPN1-201ENST00000279247 LRRN2O75325 713 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 KRT76Q01546 638 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 GBP6Q6ZN66 633 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 CYFIP1Q7L576 1253 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 HAUS6Q7Z4H7 955 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 GOLGA1Q92805 767 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 C12orf42Q96LP6 360 aa19.62■□□□□ 0.73
CAPN1-201ENST00000279247 GANQ9H2C0 597 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms