RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 DLX2Q07687 328 aaPredicted RBP14.43□□□□□ -0.1
CD44-203ENST00000278386 NTRK3Q16288 839 aa14.43□□□□□ -0.1
CD44-203ENST00000278386 CTC1Q2NKJ3 1217 aa14.43□□□□□ -0.1
CD44-203ENST00000278386 TRIM22Q8IYM9 498 aa14.43□□□□□ -0.1
CD44-203ENST00000278386 CRIPAKQ8N1N5 446 aa14.43□□□□□ -0.1
CD44-203ENST00000278386 SCLT1Q96NL6 688 aa14.43□□□□□ -0.1
CD44-203ENST00000278386 POP1Q99575 1024 aaKnown RBP14.43□□□□□ -0.1
CD44-203ENST00000278386 TEKT3Q9BXF9 490 aa14.43□□□□□ -0.1
CD44-203ENST00000278386 AGXT2Q9BYV1 514 aa14.43□□□□□ -0.1
CD44-203ENST00000278386 AAASQ9NRG9 546 aa14.43□□□□□ -0.1
CD44-203ENST00000278386 RGS18Q9NS28 235 aa14.43□□□□□ -0.1
CD44-203ENST00000278386 CD207Q9UJ71 328 aa14.43□□□□□ -0.1
CD44-203ENST00000278386 PCDHB12Q9Y5F1 795 aa14.43□□□□□ -0.1
CD44-203ENST00000278386 CPLX1O14810 134 aa14.42□□□□□ -0.1
CD44-203ENST00000278386 MAGEB2O15479 319 aa14.42□□□□□ -0.1
CD44-203ENST00000278386 MBTPS2O43462 519 aa14.42□□□□□ -0.1
CD44-203ENST00000278386 GAS7O60861 476 aa14.42□□□□□ -0.1
CD44-203ENST00000278386 OATP04181 439 aa14.42□□□□□ -0.1
CD44-203ENST00000278386 ALADP13716 330 aa14.42□□□□□ -0.1
CD44-203ENST00000278386 TMOD1P28289 359 aa14.42□□□□□ -0.1
CD44-203ENST00000278386 PDIA3P30101 505 aaKnown RBP14.42□□□□□ -0.1
CD44-203ENST00000278386 CIITAP33076 1130 aa14.42□□□□□ -0.1
CD44-203ENST00000278386 IRS1P35568 1242 aa14.42□□□□□ -0.1
CD44-203ENST00000278386 PRKCEQ02156 737 aa14.42□□□□□ -0.1
CD44-203ENST00000278386 SMAD4Q13485 552 aaKnown RBP14.42□□□□□ -0.1
CD44-203ENST00000278386 CAMK1Q14012 370 aa14.42□□□□□ -0.1
CD44-203ENST00000278386 CSPP1Q1MSJ5 1256 aa14.42□□□□□ -0.1
CD44-203ENST00000278386 SLC24A5Q71RS6 500 aa14.42□□□□□ -0.1
CD44-203ENST00000278386 ADGRD2Q7Z7M1 963 aa14.42□□□□□ -0.1
CD44-203ENST00000278386 RBM23Q86U06 439 aaKnown RBP14.42□□□□□ -0.1
CD44-203ENST00000278386 ADHFE1Q8IWW8 467 aa14.42□□□□□ -0.1
CD44-203ENST00000278386 FBXL16Q8N461 479 aa14.42□□□□□ -0.1
CD44-203ENST00000278386 LRRC71Q8N4P6 559 aa14.42□□□□□ -0.1
CD44-203ENST00000278386 SPPL3Q8TCT6 385 aa14.42□□□□□ -0.1
CD44-203ENST00000278386 LENG9Q96B70 501 aa14.42□□□□□ -0.1
CD44-203ENST00000278386 ATP6V0A4Q9HBG4 840 aa14.42□□□□□ -0.1
CD44-203ENST00000278386 DISC1Q9NRI5 854 aa14.42□□□□□ -0.1
CD44-203ENST00000278386 C9IYK1 514 aa14.41□□□□□ -0.1
CD44-203ENST00000278386 MSH4O15457 936 aa14.41□□□□□ -0.1
CD44-203ENST00000278386 DCXO43602 365 aa14.41□□□□□ -0.1
CD44-203ENST00000278386 GPR32O75388 356 aa14.41□□□□□ -0.1
CD44-203ENST00000278386 FGFR1P11362 822 aa14.41□□□□□ -0.1
CD44-203ENST00000278386 NRIP1P48552 1158 aa14.41□□□□□ -0.1
CD44-203ENST00000278386 JAK3P52333 1124 aa14.41□□□□□ -0.1
CD44-203ENST00000278386 NLRP11P59045 1033 aaKnown RBP14.41□□□□□ -0.1
CD44-203ENST00000278386 SSRP1Q08945 709 aaKnown RBP14.41□□□□□ -0.1
CD44-203ENST00000278386 SMAD2Q15796 467 aaKnown RBP14.41□□□□□ -0.1
CD44-203ENST00000278386 FAM102BQ5T8I3 360 aa14.41□□□□□ -0.1
CD44-203ENST00000278386 LRCH2Q5VUJ6 765 aa14.41□□□□□ -0.1
CD44-203ENST00000278386 EFCAB12Q6NXP0 572 aa14.41□□□□□ -0.1
CD44-203ENST00000278386 RUFY3Q7L099 469 aa14.41□□□□□ -0.1
CD44-203ENST00000278386 THNSL1Q8IYQ7 743 aa14.41□□□□□ -0.1
CD44-203ENST00000278386 MICAL1Q8TDZ2 1067 aa14.41□□□□□ -0.1
CD44-203ENST00000278386 TBCKQ8TEA7 893 aa14.41□□□□□ -0.1
CD44-203ENST00000278386 ZNF668Q96K58 619 aaPredicted RBP14.41□□□□□ -0.1
CD44-203ENST00000278386 SH3GLB2Q9NR46 395 aa14.41□□□□□ -0.1
CD44-203ENST00000278386 HCSTQ9UBK5 93 aa14.41□□□□□ -0.1
CD44-203ENST00000278386 PCDHGC5Q9Y5F6 944 aa14.41□□□□□ -0.1
CD44-203ENST00000278386 PRR33A8MZF0 331 aa14.4□□□□□ -0.1
CD44-203ENST00000278386 ZNF862O60290 1169 aa14.4□□□□□ -0.1
CD44-203ENST00000278386 ZSCAN20P17040 1043 aaPredicted RBP14.4□□□□□ -0.1
CD44-203ENST00000278386 SFNP31947 248 aa14.4□□□□□ -0.1
CD44-203ENST00000278386 TBC1D8BQ0IIM8 1120 aa14.4□□□□□ -0.1
CD44-203ENST00000278386 STK3Q13188 491 aa14.4□□□□□ -0.1
CD44-203ENST00000278386 TOB2Q14106 344 aaPredicted RBP14.4□□□□□ -0.1
CD44-203ENST00000278386 UGCGQ16739 394 aa14.4□□□□□ -0.1
CD44-203ENST00000278386 FAM43BQ6ZT52 329 aaPredicted RBP14.4□□□□□ -0.1
CD44-203ENST00000278386 MIER3Q7Z3K6 550 aa14.4□□□□□ -0.1
CD44-203ENST00000278386 ABI1Q8IZP0 508 aa14.4□□□□□ -0.1
CD44-203ENST00000278386 EFHBQ8N7U6 833 aa14.4□□□□□ -0.1
CD44-203ENST00000278386 COLGALT1Q8NBJ5 622 aa14.4□□□□□ -0.1
CD44-203ENST00000278386 GJA10Q969M2 543 aa14.4□□□□□ -0.1
CD44-203ENST00000278386 C22orf23Q9BZE7 217 aa14.4□□□□□ -0.1
CD44-203ENST00000278386 UNC45AQ9H3U1 944 aa14.4□□□□□ -0.1
CD44-203ENST00000278386 TLR9Q9NR96 1032 aa14.4□□□□□ -0.1
CD44-203ENST00000278386 NRBP2Q9NSY0 501 aa14.4□□□□□ -0.1
CD44-203ENST00000278386 TMEM161AQ9NX61 479 aa14.4□□□□□ -0.1
CD44-203ENST00000278386 SEPT9Q9UHD8 586 aaPredicted RBP14.4□□□□□ -0.1
CD44-203ENST00000278386 PCDHA4Q9UN74 947 aa14.4□□□□□ -0.1
CD44-203ENST00000278386 CYP46A1Q9Y6A2 500 aa14.4□□□□□ -0.1
CD44-203ENST00000278386 ARID2Q68CP9 1835 aa14.4□□□□□ -0.1
CD44-203ENST00000278386 FGF18O76093 207 aa14.39□□□□□ -0.11
CD44-203ENST00000278386 DEXIO95424 95 aa14.39□□□□□ -0.11
CD44-203ENST00000278386 LAG3P18627 525 aa14.39□□□□□ -0.11
CD44-203ENST00000278386 USP11P51784 963 aa14.39□□□□□ -0.11
CD44-203ENST00000278386 UBE3AQ05086 875 aa14.39□□□□□ -0.11
CD44-203ENST00000278386 ADAM15Q13444 863 aa14.39□□□□□ -0.11
CD44-203ENST00000278386 CPLX2Q6PUV4 134 aaKnown RBP14.39□□□□□ -0.11
CD44-203ENST00000278386 RNF169Q8NCN4 708 aa14.39□□□□□ -0.11
CD44-203ENST00000278386 NLRP7Q8WX94 980 aa14.39□□□□□ -0.11
CD44-203ENST00000278386 SLC5A5Q92911 643 aa14.39□□□□□ -0.11
CD44-203ENST00000278386 RIT2Q99578 217 aa14.39□□□□□ -0.11
CD44-203ENST00000278386 UPF3BQ9BZI7 483 aaKnown RBP14.39□□□□□ -0.11
CD44-203ENST00000278386 TYW1Q9NV66 732 aaKnown RBP14.39□□□□□ -0.11
CD44-203ENST00000278386 BARX2Q9UMQ3 279 aaPredicted RBP14.39□□□□□ -0.11
CD44-203ENST00000278386 C19orf67A6NJJ6 358 aa14.38□□□□□ -0.11
CD44-203ENST00000278386 HOXA2O43364 376 aa14.38□□□□□ -0.11
CD44-203ENST00000278386 TDP2O95551 362 aa14.38□□□□□ -0.11
CD44-203ENST00000278386 EVCP57679 992 aa14.38□□□□□ -0.11
CD44-203ENST00000278386 DSC3Q14574 896 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms