RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

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Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 SCFD2Q8WU76 684 aa13.88□□□□□ -0.19
HERC6-202ENST00000273960 EZH1Q92800 747 aaPredicted RBP13.88□□□□□ -0.19
HERC6-202ENST00000273960 AFF2P51816 1311 aa13.88□□□□□ -0.19
HERC6-202ENST00000273960 CCDC169A6NNP5 214 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 RIMBP2O15034 1052 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 PDE6CP51160 858 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 ICA1Q05084 483 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 ALX1Q15699 326 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 CWF19L1Q69YN2 538 aaKnown RBP13.87□□□□□ -0.19
HERC6-202ENST00000273960 CAPN12Q6ZSI9 719 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 BARGINQ6ZT62 677 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 P3H4Q92791 437 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 NUDT12Q9BQG2 462 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 RAB17Q9H0T7 212 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 MCM9Q9NXL9 1143 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 SAP30BPQ9UHR5 308 aaKnown RBP13.87□□□□□ -0.19
HERC6-202ENST00000273960 SPATA31A5Q5VU36 1347 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 SPATA31A7Q8IWB4 1347 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 HNRNPH3P31942 346 aaKnown RBP13.87□□□□□ -0.19
HERC6-202ENST00000273960 TRAPPC3LQ5T215 181 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 RPGRQ92834 1020 aaKnown RBP13.87□□□□□ -0.19
HERC6-202ENST00000273960 MINPP1Q9UNW1 487 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 HIBADHP31937 336 aaKnown RBP13.87□□□□□ -0.19
HERC6-202ENST00000273960 NAPAP54920 295 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 ADAM9Q13443 819 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 FIGNQ5HY92 759 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 ISLR2Q6UXK2 745 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 INTS8Q75QN2 995 aaKnown RBP13.87□□□□□ -0.19
HERC6-202ENST00000273960 SPATA21Q7Z572 469 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 ZC3H18Q86VM9 953 aaKnown RBP13.87□□□□□ -0.19
HERC6-202ENST00000273960 ERP27Q96DN0 273 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 POP1Q99575 1024 aaKnown RBP13.87□□□□□ -0.19
HERC6-202ENST00000273960 TMEM260Q9NX78 707 aa13.87□□□□□ -0.19
HERC6-202ENST00000273960 LUC7L3O95232 432 aaKnown RBP13.86□□□□□ -0.19
HERC6-202ENST00000273960 UBTFL6P0CB48 400 aaPredicted RBP13.86□□□□□ -0.19
HERC6-202ENST00000273960 ZCCHC18P0CG32 403 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 ETS2P15036 469 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 GBP1P32455 592 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 STX2P32856 288 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 AMPD3Q01432 767 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 IFI16Q16666 785 aaKnown RBP13.86□□□□□ -0.19
HERC6-202ENST00000273960 PFKFB3Q16875 520 aaPredicted RBP13.86□□□□□ -0.19
HERC6-202ENST00000273960 ARL6IP4Q66PJ3 421 aaKnown RBP13.86□□□□□ -0.19
HERC6-202ENST00000273960 APBB1IPQ7Z5R6 666 aaPredicted RBP13.86□□□□□ -0.19
HERC6-202ENST00000273960 PHC3Q8NDX5 983 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 DDX12PQ92771 950 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 ARHGEF2Q92974 986 aaKnown RBP13.86□□□□□ -0.19
HERC6-202ENST00000273960 TLCD1Q96CP7 247 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 PWWP2AQ96N64 755 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 PCDHA6Q9UN73 950 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 PCDHA8Q9Y5H6 950 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 KCPQ6ZWJ8 1503 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 SSU72P8A0A1W2PR75 194 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 ASAP2O43150 1006 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 PPFIA2O75334 1257 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 GFPT2O94808 682 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 CBX6O95503 412 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 KRT18P05783 430 aaKnown RBP13.86□□□□□ -0.19
HERC6-202ENST00000273960 PAEPP09466 180 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 OR52Z1P0C646 297 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 EPHB2P29323 1055 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 RCN2Q14257 317 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 ITIH4Q14624 930 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 SYCP3Q8IZU3 236 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 ARHGEF1Q92888 912 aaKnown RBP13.86□□□□□ -0.19
HERC6-202ENST00000273960 BORCS6Q96GS4 357 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 PCDHA4Q9UN74 947 aa13.86□□□□□ -0.19
HERC6-202ENST00000273960 LCA5LO95447 670 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 DIXDC1Q155Q3 683 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 GRIPAP1Q4V328 841 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 HP1BP3Q5SSJ5 553 aaPredicted RBP13.85□□□□□ -0.19
HERC6-202ENST00000273960 KCNK18Q7Z418 384 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 VGLL2Q8N8G2 317 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 SPOCK2Q92563 424 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 TGS1Q96RS0 853 aaKnown RBP13.85□□□□□ -0.19
HERC6-202ENST00000273960 HOMER3Q9NSC5 361 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 CEP72Q9P209 647 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 KLHL14Q9P2G3 628 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 COL4A3BPQ9Y5P4 624 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 USP17L3A6NCW0 530 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 USP17L4A6NCW7 530 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 GSTA1P08263 222 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 FERP16591 822 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 RIPK1Q13546 671 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 CNGA2Q16280 664 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 TBC1D25Q3MII6 688 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 CENPPQ6IPU0 288 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 USP17L1Q7RTZ2 530 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 CCNJLQ8IV13 435 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 SRRM1Q8IYB3 904 aaKnown RBP13.85□□□□□ -0.19
HERC6-202ENST00000273960 MKNK2Q9HBH9 465 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 FAM114A2Q9NRY5 505 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 PPP1R9AQ9ULJ8 1098 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 RTN3O95197 1032 aaPredicted RBP13.85□□□□□ -0.19
HERC6-202ENST00000273960 PYGBP11216 843 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 MYH1P12882 1939 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 MMP13P45452 471 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 TXNRD3Q86VQ6 643 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 TPCN2Q8NHX9 752 aa13.85□□□□□ -0.19
HERC6-202ENST00000273960 SNX29Q8TEQ0 813 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms