RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 BACH1O14867 736 aa18.14■□□□□ 0.5
VPS54-201ENST00000272322 FOSP01100 380 aaPredicted RBP18.14■□□□□ 0.5
VPS54-201ENST00000272322 PRKG1Q13976 671 aa18.14■□□□□ 0.5
VPS54-201ENST00000272322 AKT1S1Q96B36 256 aa18.14■□□□□ 0.5
VPS54-201ENST00000272322 FAM20AQ96MK3 541 aa18.14■□□□□ 0.5
VPS54-201ENST00000272322 TYW1Q9NV66 732 aaKnown RBP18.14■□□□□ 0.5
VPS54-201ENST00000272322 MAST2Q6P0Q8 1798 aa18.14■□□□□ 0.49
VPS54-201ENST00000272322 IGLV3-22A0A075B6J6 115 aa18.14■□□□□ 0.49
VPS54-201ENST00000272322 EYA4O95677 639 aa18.14■□□□□ 0.49
VPS54-201ENST00000272322 MCM3P25205 808 aa18.14■□□□□ 0.49
VPS54-201ENST00000272322 LRRC31Q6UY01 552 aa18.14■□□□□ 0.49
VPS54-201ENST00000272322 UHMK1Q8TAS1 419 aaKnown RBP18.14■□□□□ 0.49
VPS54-201ENST00000272322 KAT5Q92993 513 aa18.14■□□□□ 0.49
VPS54-201ENST00000272322 ZNF70Q9UC06 446 aaPredicted RBP18.14■□□□□ 0.49
VPS54-201ENST00000272322 CYP3A7-CYP3A51PA0A087WV96 503 aa18.14■□□□□ 0.49
VPS54-201ENST00000272322 ATMINO43313 823 aaPredicted RBP18.14■□□□□ 0.49
VPS54-201ENST00000272322 HIP1RO75146 1068 aa18.14■□□□□ 0.49
VPS54-201ENST00000272322 EGFRP00533 1210 aa18.14■□□□□ 0.49
VPS54-201ENST00000272322 CYP3A7P24462 503 aa18.14■□□□□ 0.49
VPS54-201ENST00000272322 NPEPPSP55786 919 aa18.14■□□□□ 0.49
VPS54-201ENST00000272322 IRX5P78411 483 aaPredicted RBP18.14■□□□□ 0.49
VPS54-201ENST00000272322 PDCLQ13371 301 aa18.14■□□□□ 0.49
VPS54-201ENST00000272322 GLT8D2Q9H1C3 349 aa18.14■□□□□ 0.49
VPS54-201ENST00000272322 TCEAL9Q9UHQ7 104 aa18.14■□□□□ 0.49
VPS54-201ENST00000272322 TUBB4BP68371 445 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 SEMA3FQ13275 785 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 ZIM3Q96PE6 472 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 HSD17B14Q9BPX1 270 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 TMOD4Q9NZQ9 345 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 NR2E1Q9Y466 385 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 DDX3XO00571 662 aaKnown RBP eCLIP18.13■□□□□ 0.49
VPS54-201ENST00000272322 PDXKO00764 312 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 HSF2BPO75031 334 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 GALCP54803 685 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 EPHA7Q15375 998 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 MMGT1Q8N4V1 131 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 CASKIN2Q8WXE0 1202 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 CRYGNQ8WXF5 182 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 MED4Q9NPJ6 270 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 COL20A1Q9P218 1284 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 TAF1LQ8IZX4 1826 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 H2AFZP0C0S5 128 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 STAT1P42224 750 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 EDRF1Q3B7T1 1238 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 Q4G0T1 1027 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 PLA2G4FQ68DD2 849 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 H2AFVQ71UI9 128 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 AENQ8WTP8 325 aaKnown RBP18.13■□□□□ 0.49
VPS54-201ENST00000272322 GMCL1Q96IK5 515 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 NAP1L4Q99733 375 aaKnown RBP18.13■□□□□ 0.49
VPS54-201ENST00000272322 CBWD1Q9BRT8 395 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 FRMD4BQ9Y2L6 1034 aa18.13■□□□□ 0.49
VPS54-201ENST00000272322 MYH4Q9Y623 1939 aa18.12■□□□□ 0.49
VPS54-201ENST00000272322 TESPA1A2RU30 521 aaPredicted RBP18.12■□□□□ 0.49
VPS54-201ENST00000272322 SPDYE2BA6NHP3 402 aa18.12■□□□□ 0.49
VPS54-201ENST00000272322 SMIM23A6NLE4 172 aa18.12■□□□□ 0.49
VPS54-201ENST00000272322 KRIT1O00522 736 aa18.12■□□□□ 0.49
VPS54-201ENST00000272322 SPDYE6P0CI01 402 aa18.12■□□□□ 0.49
VPS54-201ENST00000272322 CCT5P48643 541 aa18.12■□□□□ 0.49
VPS54-201ENST00000272322 CFAP58Q5T655 872 aa18.12■□□□□ 0.49
VPS54-201ENST00000272322 METTL13Q8N6R0 699 aa18.12■□□□□ 0.49
VPS54-201ENST00000272322 POP1Q99575 1024 aaKnown RBP18.12■□□□□ 0.49
VPS54-201ENST00000272322 TARSL2A2RTX5 802 aaKnown RBP18.12■□□□□ 0.49
VPS54-201ENST00000272322 CCDC169A6NNP5 214 aa18.12■□□□□ 0.49
VPS54-201ENST00000272322 LCA5LO95447 670 aa18.12■□□□□ 0.49
VPS54-201ENST00000272322 ITGB5P18084 799 aa18.12■□□□□ 0.49
VPS54-201ENST00000272322 SSTR3P32745 418 aaPredicted RBP18.12■□□□□ 0.49
VPS54-201ENST00000272322 MIER3Q7Z3K6 550 aa18.12■□□□□ 0.49
VPS54-201ENST00000272322 SAAL1Q96ER3 474 aa18.12■□□□□ 0.49
VPS54-201ENST00000272322 TRAF3IP3Q9Y228 551 aa18.12■□□□□ 0.49
VPS54-201ENST00000272322 PITPNM2Q9BZ72 1349 aa18.12■□□□□ 0.49
VPS54-201ENST00000272322 ZC3H4Q9UPT8 1303 aaKnown RBP18.12■□□□□ 0.49
VPS54-201ENST00000272322 VGLL3A8MV65 326 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 PPP1R12BO60237 982 aaPredicted RBP18.11■□□□□ 0.49
VPS54-201ENST00000272322 TUBBP07437 444 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 PSMC2P35998 433 aaKnown RBP18.11■□□□□ 0.49
VPS54-201ENST00000272322 GNGT1P63211 74 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 C1orf186Q6ZWK4 172 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 FRMD5Q7Z6J6 570 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 GOLGA5Q8TBA6 731 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 SLC20A1Q8WUM9 679 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 GOPCQ9HD26 462 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 UBE2TQ9NPD8 197 aaPredicted RBP18.11■□□□□ 0.49
VPS54-201ENST00000272322 AIPL1Q9NZN9 384 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 SCN9AQ15858 1988 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 PJA2O43164 708 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 FLOT1O75955 427 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 C2CD6Q53TS8 623 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 MEI1Q5TIA1 1274 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 CNKSR1Q969H4 720 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 IGSF9BQ9UPX0 1349 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 FOXN3O00409 490 aaPredicted RBP18.11■□□□□ 0.49
VPS54-201ENST00000272322 PRELPP51888 382 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 EPC2Q52LR7 807 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 PADI6Q6TGC4 694 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 GMCL1P1Q8NEA9 526 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 KCNH7Q9NS40 1196 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 MYO3BQ8WXR4 1341 aa18.11■□□□□ 0.49
VPS54-201ENST00000272322 SLC16A4O15374 487 aa18.1■□□□□ 0.49
VPS54-201ENST00000272322 PSMD10O75832 226 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms