RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 STK17AQ9UEE5 414 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 NOS1P29475 1434 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 CTIFO43310 598 aaKnown RBP11.9□□□□□ -0.5
CHFR-201ENST00000266880 TCF3P15923 654 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 KLC1Q07866 573 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 ODR4Q5SWX8 454 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 KIAA1024Q9UPX6 916 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 KRT37O76014 449 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 CSPG5O95196 566 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 FAM193BQ96PV7 902 aaPredicted RBP11.9□□□□□ -0.5
CHFR-201ENST00000266880 PARVGQ9HBI0 331 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 ARHGEF3Q9NR81 526 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 PBXIP1Q96AQ6 731 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 ADPGKQ9BRR6 497 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 HNRNPDLO14979 420 aaKnown RBP11.9□□□□□ -0.5
CHFR-201ENST00000266880 ARIH2O95376 493 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 PTK2BQ14289 1009 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 CDH24Q86UP0 819 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 ZSCAN10Q96SZ4 725 aaPredicted RBP11.9□□□□□ -0.5
CHFR-201ENST00000266880 PCP4L1A6NKN8 68 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 FAM47CQ5HY64 1035 aa11.9□□□□□ -0.5
CHFR-201ENST00000266880 DHTKD1Q96HY7 919 aaPredicted RBP11.9□□□□□ -0.5
CHFR-201ENST00000266880 AOC3Q16853 763 aa11.9□□□□□ -0.51
CHFR-201ENST00000266880 TMC5Q6UXY8 1006 aa11.9□□□□□ -0.51
CHFR-201ENST00000266880 CYFIP2Q96F07 1278 aa11.9□□□□□ -0.51
CHFR-201ENST00000266880 BAZ2BQ9UIF8 2168 aaKnown RBP11.9□□□□□ -0.51
CHFR-201ENST00000266880 GYS1P13807 737 aa11.9□□□□□ -0.51
CHFR-201ENST00000266880 ZNF18P17022 549 aa11.9□□□□□ -0.51
CHFR-201ENST00000266880 EGFL6Q8IUX8 553 aa11.9□□□□□ -0.51
CHFR-201ENST00000266880 SPATA5Q8NB90 893 aa11.9□□□□□ -0.51
CHFR-201ENST00000266880 RABGAP1LQ5R372 815 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 ANKRD36BP1Q96IX9 119 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 ATXN3P54252 364 aaPredicted RBP11.89□□□□□ -0.51
CHFR-201ENST00000266880 ARID5BQ14865 1188 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 AHI1Q8N157 1196 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 VAMP4O75379 141 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 NDUFA10O95299 355 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 CACNB1Q02641 598 aaPredicted RBP11.89□□□□□ -0.51
CHFR-201ENST00000266880 PPARAQ07869 468 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 CDO1Q16878 200 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 G2E3Q7L622 706 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 PCDHA12Q9UN75 941 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 PRELID1Q9Y255 219 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 MMTAG2Q9BU76 263 aaKnown RBP11.89□□□□□ -0.51
CHFR-201ENST00000266880 CASS4Q9NQ75 786 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 DLGAP2Q9P1A6 1054 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 WDR64B1ANS9 1081 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 PFKFB2O60825 505 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 NCAPG2Q86XI2 1143 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 BEGAINQ9BUH8 593 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 CLIC2O15247 247 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 RUNX1T1Q06455 604 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 SEL1LQ9UBV2 794 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 TTC7AQ9ULT0 858 aaPredicted RBP11.89□□□□□ -0.51
CHFR-201ENST00000266880 AQRO60306 1485 aaKnown RBP eCLIP11.89□□□□□ -0.511e-7■■■■■ 49.5
CHFR-201ENST00000266880 IGF1RP08069 1367 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 GOLGA8IPA6NC78 632 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 KCNG1Q9UIX4 513 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 ITGB1BP2Q9UKP3 347 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 TOP2BQ02880 1626 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 CTCFP49711 727 aaPredicted RBP11.89□□□□□ -0.51
CHFR-201ENST00000266880 POLA2Q14181 598 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 P2RX5Q93086 422 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 OSBPL9Q96SU4 736 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 PCIF1Q9H4Z3 704 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 SARS2Q9NP81 518 aaKnown RBP11.89□□□□□ -0.51
CHFR-201ENST00000266880 RNF14Q9UBS8 474 aa11.89□□□□□ -0.51
CHFR-201ENST00000266880 TAF5LO75529 589 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 SFSWAPQ12872 951 aaKnown RBP11.88□□□□□ -0.51
CHFR-201ENST00000266880 TFCP2L1Q9NZI6 479 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 DSEQ9UL01 958 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 ADCY9O60503 1353 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 CD58P19256 250 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 POU5F1BQ06416 359 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 MXD4Q14582 209 aaPredicted RBP11.88□□□□□ -0.51
CHFR-201ENST00000266880 MAN2A1Q16706 1144 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 KIF2BQ8N4N8 673 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 ZNF408Q9H9D4 720 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 SRGAP2CP0DJJ0 459 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 SOX11P35716 441 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 TFAP4Q01664 338 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 TFAMQ00059 246 aaKnown RBP11.88□□□□□ -0.51
CHFR-201ENST00000266880 RIN3Q8TB24 985 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 PRMT1Q99873 361 aaKnown RBP11.88□□□□□ -0.51
CHFR-201ENST00000266880 EXOSC4Q9NPD3 245 aaKnown RBP11.88□□□□□ -0.51
CHFR-201ENST00000266880 PALD1Q9ULE6 856 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 GOLGA8JA6NMD2 632 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 GOLGA8HP0CJ92 632 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 PTH1RQ03431 593 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 DNAJC9Q8WXX5 260 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 MLXIPQ9HAP2 919 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 ATP8A2Q9NTI2 1148 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 KLHL18O94889 574 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 PAMP19021 973 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 DAB2IPQ5VWQ8 1189 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 GANCQ8TET4 914 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 ATP6V1G3Q96LB4 118 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 NSMCE4AQ9NXX6 385 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 PPIP5K1Q6PFW1 1433 aa11.88□□□□□ -0.51
CHFR-201ENST00000266880 NCK2O43639 380 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms