RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 P4HA1P13674 534 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 HIBADHP31937 336 aaKnown RBP12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 SKIV2L2P42285 1042 aaKnown RBP12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 FUKQ8N0W3 1084 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 MAP3K14Q99558 947 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 ZNF148Q9UQR1 794 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 KIF28PB7ZC32 967 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 USP17L12C9JPN9 530 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 USP17L21D6R901 530 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 BRAFP15056 766 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 SRRM1Q8IYB3 904 aaKnown RBP12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 ATP11CQ8NB49 1132 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 TTC13Q8NBP0 860 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 WWP1Q9H0M0 922 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 UPF3AQ9H1J1 476 aaKnown RBP12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 ETAA1Q9NY74 926 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 SPAG6O75602 509 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 SH2D3CQ8N5H7 860 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 TJP3O95049 919 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 NQO1P15559 274 aaKnown RBP12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 HSD17B3P37058 310 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 CUL4BQ13620 913 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 STOX1Q6ZVD7 989 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 CYFIP1Q7L576 1253 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 LCA5Q86VQ0 697 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 TRAPPC9Q96Q05 1148 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 KIAA1024Q9UPX6 916 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 PTPN22Q9Y2R2 807 aa12.52□□□□□ -0.41
DNMT3A-201ENST00000264709 TRAPPC3O43617 180 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 GAS7O60861 476 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 PTPAQ15257 358 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 ERP44Q9BS26 406 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 EMILIN3Q9NT22 766 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 COL15A1P39059 1388 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 SLCO1A2P46721 670 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 MED21Q13503 144 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 C1orf146Q5VVC0 180 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 NELFCDQ8IXH7 590 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 METP08581 1390 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 CEMIPQ8WUJ3 1361 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 GARSP41250 739 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 AP1B1Q10567 949 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 TMED1Q13445 227 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 PROSER3Q2NL68 480 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 DPF2Q92785 391 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 NT5C1BQ96P26 610 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 RXFP1Q9HBX9 757 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 MLXIPQ9HAP2 919 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 TBC1D23Q9NUY8 699 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 SEPT10Q9P0V9 454 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 PCYT1AP49585 367 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 GFPT1Q06210 699 aaPredicted RBP12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 APBB2Q92870 758 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 PGM2Q96G03 612 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 MAGEA13PA6NCF6 341 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 ATF7P17544 494 aaPredicted RBP12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 AP1M1Q9BXS5 423 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 DDX47Q9H0S4 455 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 MCF2LO15068 1137 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 STAM2O75886 525 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 MAPK4P31152 587 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 HPS3Q969F9 1004 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 IGF2BP3O00425 579 aaKnown RBP eCLIP12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 ANP32DO95626 131 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 RINT1Q6NUQ1 792 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 PARVGQ9HBI0 331 aa12.51□□□□□ -0.41
DNMT3A-201ENST00000264709 H7C1W4 665 aa12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 PHF2O75151 1096 aa12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 PHEXP78562 749 aa12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 DMP1Q13316 513 aaPredicted RBP12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 AZI2Q9H6S1 392 aa12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 DDX20Q9UHI6 824 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 CNOT7Q9UIV1 285 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 TRPC6Q9Y210 931 aa12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 ITIH2P19823 946 aa12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 ENO4A6NNW6 628 aa12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 H0Y3Z8 333 aa12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 HDLBPQ00341 1268 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 TRIM28Q13263 835 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 TERB1Q8NA31 727 aa12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 TBC1D7Q9P0N9 293 aa12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 SPECC1L-ADORA2AF8WAN1 911 aa12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 GIPC1O14908 333 aa12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 IGKV5-2P06315 115 aa12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 TTLL12Q14166 644 aaPredicted RBP12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 ROR2Q01974 943 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 CCDC137Q6PK04 289 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 KIFC3Q9BVG8 833 aa12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 SUGCTQ9HAC7 445 aa12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 MTO1Q9Y2Z2 717 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 TRMT5Q32P41 509 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 GRAMD1BQ3KR37 738 aa12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 TRIM15Q9C019 465 aa12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 ERVV-1B6SEH8 477 aa12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 DSG1Q02413 1049 aa12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 ATXN2LQ8WWM7 1075 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 UVRAGQ9P2Y5 699 aa12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 TACC3Q9Y6A5 838 aa12.5□□□□□ -0.41
DNMT3A-201ENST00000264709 PDZD4Q76G19 769 aaPredicted RBP12.49□□□□□ -0.41
DNMT3A-201ENST00000264709 GDAP1Q8TB36 358 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms