RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 FUT8Q9BYC5 575 aa13.62□□□□□ -0.23
HERC6-201ENST00000264346 MTRF1LQ9UGC7 380 aaKnown RBP13.62□□□□□ -0.23
HERC6-201ENST00000264346 BZW2Q9Y6E2 419 aaKnown RBP13.62□□□□□ -0.23
HERC6-201ENST00000264346 SLCO1A2P46721 670 aa13.62□□□□□ -0.23
HERC6-201ENST00000264346 ORC2Q13416 577 aaPredicted RBP13.62□□□□□ -0.23
HERC6-201ENST00000264346 COG2Q14746 738 aa13.62□□□□□ -0.23
HERC6-201ENST00000264346 ZNF394Q53GI3 561 aa13.62□□□□□ -0.23
HERC6-201ENST00000264346 WDR59Q6PJI9 974 aa13.62□□□□□ -0.23
HERC6-201ENST00000264346 PPP4R3CPQ6ZMV5 832 aa13.62□□□□□ -0.23
HERC6-201ENST00000264346 GOLGA5Q8TBA6 731 aa13.62□□□□□ -0.23
HERC6-201ENST00000264346 LRRC45Q96CN5 670 aa13.62□□□□□ -0.23
HERC6-201ENST00000264346 FAM163AQ96GL9 167 aaPredicted RBP13.62□□□□□ -0.23
HERC6-201ENST00000264346 CAPS2Q9BXY5 557 aa13.62□□□□□ -0.23
HERC6-201ENST00000264346 GPRC5CQ9NQ84 441 aa13.62□□□□□ -0.23
HERC6-201ENST00000264346 FAM198AQ9UFP1 575 aa13.62□□□□□ -0.23
HERC6-201ENST00000264346 EMSYQ7Z589 1322 aa13.62□□□□□ -0.23
HERC6-201ENST00000264346 DISP2A7MBM2 1401 aa13.62□□□□□ -0.23
HERC6-201ENST00000264346 ANO9A1A5B4 782 aa13.62□□□□□ -0.23
HERC6-201ENST00000264346 IFNB1P01574 187 aa13.62□□□□□ -0.23
HERC6-201ENST00000264346 ARHGAP25P42331 645 aa13.62□□□□□ -0.23
HERC6-201ENST00000264346 GRM1Q13255 1194 aa13.62□□□□□ -0.23
HERC6-201ENST00000264346 KAZNQ674X7 775 aa13.62□□□□□ -0.23
HERC6-201ENST00000264346 SNRNP48Q6IEG0 339 aaKnown RBP13.62□□□□□ -0.23
HERC6-201ENST00000264346 FAM160B2Q86V87 743 aa13.62□□□□□ -0.23
HERC6-201ENST00000264346 DDX42Q86XP3 938 aaKnown RBP eCLIP13.62□□□□□ -0.23
HERC6-201ENST00000264346 RTKN2Q8IZC4 609 aa13.62□□□□□ -0.23
HERC6-201ENST00000264346 LRRC10BA6NIK2 292 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 EML1O00423 815 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 SMARCA1P28370 1054 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 HOXA10P31260 410 aaPredicted RBP13.61□□□□□ -0.23
HERC6-201ENST00000264346 NF2P35240 595 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 COPB2P35606 906 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 EPHB4P54760 987 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 HMGCS2P54868 508 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 PACS2Q86VP3 889 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 SH2D3CQ8N5H7 860 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 PRPF38AQ8NAV1 312 aaKnown RBP13.61□□□□□ -0.23
HERC6-201ENST00000264346 MTMR9Q96QG7 549 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 ANKZF1Q9H8Y5 726 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 RNF146Q9NTX7 359 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 HERC5Q9UII4 1024 aaKnown RBP13.61□□□□□ -0.23
HERC6-201ENST00000264346 AKAP3O75969 853 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 VIMP08670 466 aaKnown RBP13.61□□□□□ -0.23
HERC6-201ENST00000264346 LMNB1P20700 586 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 TMOD1P28289 359 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 PDCLQ13371 301 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 SLC18A3Q16572 532 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 DCUN1D2Q6PH85 259 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 PASD1Q8IV76 773 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 HDAC7Q8WUI4 952 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 C1orf112Q9NSG2 853 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 AMACRQ9UHK6 382 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 GAKO14976 1311 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 A0A1W2PRG0 241 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 FRMD3A2A2Y4 597 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 DPEP1P16444 411 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 TRPC3Q13507 836 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 RINT1Q6NUQ1 792 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 ZBTB33Q86T24 672 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 MTMR8Q96EF0 704 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 NAP1L3Q99457 506 aaPredicted RBP13.61□□□□□ -0.23
HERC6-201ENST00000264346 GLIS2Q9BZE0 524 aaPredicted RBP13.61□□□□□ -0.23
HERC6-201ENST00000264346 GABBR1Q9UBS5 961 aa13.61□□□□□ -0.23
HERC6-201ENST00000264346 PDE6CP51160 858 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 DGKZQ13574 1117 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 GIT2Q14161 759 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 GNPTABQ3T906 1256 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 DACT2Q5SW24 774 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 SWSAP1Q6NVH7 229 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 RSBN1LQ6PCB5 846 aaPredicted RBP13.6□□□□□ -0.23
HERC6-201ENST00000264346 NT5C1BQ96P26 610 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 VCPKMTQ9H867 229 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 MKRN1Q9UHC7 482 aaKnown RBP13.6□□□□□ -0.23
HERC6-201ENST00000264346 SERPINA10Q9UK55 444 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 DENND3A2RUS2 1198 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 ZSCAN5CA6NGD5 496 aaPredicted RBP13.6□□□□□ -0.23
HERC6-201ENST00000264346 EVI5O60447 810 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 CD58P19256 250 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 QARSP47897 775 aaKnown RBP13.6□□□□□ -0.23
HERC6-201ENST00000264346 DHX9Q08211 1270 aaKnown RBP13.6□□□□□ -0.23
HERC6-201ENST00000264346 AZI2Q9H6S1 392 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 TAF1P21675 1872 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 NFIBO00712 420 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 ATF7P17544 494 aaPredicted RBP13.6□□□□□ -0.23
HERC6-201ENST00000264346 NNTQ13423 1086 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 BAATQ14032 418 aaPredicted RBP13.6□□□□□ -0.23
HERC6-201ENST00000264346 CRY2Q49AN0 593 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 EPC2Q52LR7 807 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 DALRD3Q5D0E6 543 aaKnown RBP13.6□□□□□ -0.23
HERC6-201ENST00000264346 BEND6Q5SZJ8 279 aaPredicted RBP13.6□□□□□ -0.23
HERC6-201ENST00000264346 ZNF365Q70YC5 407 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 HAUS6Q7Z4H7 955 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 ARFGAP2Q8N6H7 521 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 FAM213AQ9BRX8 229 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 SNX24Q9Y343 169 aa13.6□□□□□ -0.23
HERC6-201ENST00000264346 ZNF142P52746 1687 aaPredicted RBP13.6□□□□□ -0.23
HERC6-201ENST00000264346 LRRIQ3A6PVS8 624 aaPredicted RBP13.59□□□□□ -0.23
HERC6-201ENST00000264346 PDXKO00764 312 aa13.59□□□□□ -0.23
HERC6-201ENST00000264346 NKRFO15226 690 aaKnown RBP eCLIP13.59□□□□□ -0.23
HERC6-201ENST00000264346 ATMINO43313 823 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms