RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 ZNF710Q8N1W2 664 aa18.09■□□□□ 0.49
USE1-201ENST00000263897 HAS1Q92839 578 aa18.09■□□□□ 0.49
USE1-201ENST00000263897 BRMS1Q9HCU9 246 aa18.09■□□□□ 0.49
USE1-201ENST00000263897 ST3GAL5Q9UNP4 418 aa18.09■□□□□ 0.49
USE1-201ENST00000263897 COL4A6Q14031 1691 aa18.09■□□□□ 0.49
USE1-201ENST00000263897 BRWD1Q9NSI6 2320 aa18.09■□□□□ 0.49
USE1-201ENST00000263897 FAM205CA6NFA0 338 aa18.08■□□□□ 0.48
USE1-201ENST00000263897 H3BNC9 293 aa18.08■□□□□ 0.48
USE1-201ENST00000263897 EML1O00423 815 aa18.08■□□□□ 0.48
USE1-201ENST00000263897 MMP1P03956 469 aa18.08■□□□□ 0.48
USE1-201ENST00000263897 STAG3L1P0CL83 205 aa18.08■□□□□ 0.48
USE1-201ENST00000263897 NLRP11P59045 1033 aaKnown RBP18.08■□□□□ 0.48
USE1-201ENST00000263897 PSMC5P62195 406 aa18.08■□□□□ 0.48
USE1-201ENST00000263897 TBC1D8BQ0IIM8 1120 aa18.08■□□□□ 0.48
USE1-201ENST00000263897 ST3GAL1Q11201 340 aa18.08■□□□□ 0.48
USE1-201ENST00000263897 NPAS4Q8IUM7 802 aa18.08■□□□□ 0.48
USE1-201ENST00000263897 LRRC71Q8N4P6 559 aa18.08■□□□□ 0.48
USE1-201ENST00000263897 CEP89Q96ST8 783 aa18.08■□□□□ 0.48
USE1-201ENST00000263897 MAP7D2Q96T17 732 aa18.08■□□□□ 0.48
USE1-201ENST00000263897 PPP1R16BQ96T49 567 aa18.08■□□□□ 0.48
USE1-201ENST00000263897 OSMRQ99650 979 aa18.08■□□□□ 0.48
USE1-201ENST00000263897 KIF2CQ99661 725 aa18.08■□□□□ 0.48
USE1-201ENST00000263897 ADAMTS10Q9H324 1103 aa18.08■□□□□ 0.48
USE1-201ENST00000263897 VAV3Q9UKW4 847 aa18.08■□□□□ 0.48
USE1-201ENST00000263897 AKT3Q9Y243 479 aa18.08■□□□□ 0.48
USE1-201ENST00000263897 MYO7AQ13402 2215 aa18.07■□□□□ 0.48
USE1-201ENST00000263897 ADGRA3Q8IWK6 1321 aa18.07■□□□□ 0.48
USE1-201ENST00000263897 COL4A4P53420 1690 aaPredicted RBP18.07■□□□□ 0.48
USE1-201ENST00000263897 DDX11L8A8MPP1 907 aa18.07■□□□□ 0.48
USE1-201ENST00000263897 BTBD18B2RXH4 712 aa18.07■□□□□ 0.48
USE1-201ENST00000263897 MGEA5O60502 916 aa18.07■□□□□ 0.48
USE1-201ENST00000263897 LINC00271P0C7V0 271 aa18.07■□□□□ 0.48
USE1-201ENST00000263897 BMPR1AP36894 532 aa18.07■□□□□ 0.48
USE1-201ENST00000263897 GPM6BQ13491 265 aa18.07■□□□□ 0.48
USE1-201ENST00000263897 BTG3Q14201 252 aaPredicted RBP18.07■□□□□ 0.48
USE1-201ENST00000263897 BANK1Q8NDB2 785 aa18.07■□□□□ 0.48
USE1-201ENST00000263897 CLP1Q92989 425 aaKnown RBP18.07■□□□□ 0.48
USE1-201ENST00000263897 ADAM2Q99965 735 aa18.07■□□□□ 0.48
USE1-201ENST00000263897 RGS18Q9NS28 235 aa18.07■□□□□ 0.48
USE1-201ENST00000263897 COG5Q9UP83 839 aa18.07■□□□□ 0.48
USE1-201ENST00000263897 NLRC5Q86WI3 1866 aa18.07■□□□□ 0.48
USE1-201ENST00000263897 MARCH6O60337 910 aa18.06■□□□□ 0.48
USE1-201ENST00000263897 BAG4O95429 457 aaKnown RBP18.06■□□□□ 0.48
USE1-201ENST00000263897 RB1P06400 928 aa18.06■□□□□ 0.48
USE1-201ENST00000263897 SARSP49591 514 aaKnown RBP18.06■□□□□ 0.48
USE1-201ENST00000263897 TRIM29Q14134 588 aa18.06■□□□□ 0.48
USE1-201ENST00000263897 MTERF2Q49AM1 385 aa18.06■□□□□ 0.48
USE1-201ENST00000263897 FAM228AQ86W67 206 aa18.06■□□□□ 0.48
USE1-201ENST00000263897 DIS3L2Q8IYB7 885 aaKnown RBP18.06■□□□□ 0.48
USE1-201ENST00000263897 MRPL38Q96DV4 380 aaKnown RBP18.06■□□□□ 0.48
USE1-201ENST00000263897 ZSCAN31Q96LW9 406 aaPredicted RBP18.06■□□□□ 0.48
USE1-201ENST00000263897 C1orf112Q9NSG2 853 aa18.06■□□□□ 0.48
USE1-201ENST00000263897 SEPT9Q9UHD8 586 aaPredicted RBP18.06■□□□□ 0.48
USE1-201ENST00000263897 RWDD3Q9Y3V2 267 aa18.06■□□□□ 0.48
USE1-201ENST00000263897 IGKV6-21A0A0C4DH24 114 aa18.05■□□□□ 0.48
USE1-201ENST00000263897 DENND3A2RUS2 1198 aa18.05■□□□□ 0.48
USE1-201ENST00000263897 TMEM150BA6NC51 233 aa18.05■□□□□ 0.48
USE1-201ENST00000263897 C9IYK1 514 aa18.05■□□□□ 0.48
USE1-201ENST00000263897 C5orf67F2Z3F1 127 aa18.05■□□□□ 0.48
USE1-201ENST00000263897 P4HBP07237 508 aaKnown RBP18.05■□□□□ 0.48
USE1-201ENST00000263897 EIF4BP23588 611 aaKnown RBP18.05■□□□□ 0.48
USE1-201ENST00000263897 QARSP47897 775 aaKnown RBP18.05■□□□□ 0.48
USE1-201ENST00000263897 FOSBP53539 338 aa18.05■□□□□ 0.48
USE1-201ENST00000263897 FAM189BP81408 668 aa18.05■□□□□ 0.48
USE1-201ENST00000263897 TFF2Q03403 129 aa18.05■□□□□ 0.48
USE1-201ENST00000263897 EPHA7Q15375 998 aa18.05■□□□□ 0.48
USE1-201ENST00000263897 PTPROQ16827 1216 aa18.05■□□□□ 0.48
USE1-201ENST00000263897 AAK1Q2M2I8 961 aa18.05■□□□□ 0.48
USE1-201ENST00000263897 SLC24A5Q71RS6 500 aa18.05■□□□□ 0.48
USE1-201ENST00000263897 ANO5Q75V66 913 aa18.05■□□□□ 0.48
USE1-201ENST00000263897 POTEDQ86YR6 584 aa18.05■□□□□ 0.48
USE1-201ENST00000263897 CCDC83Q8IWF9 413 aa18.05■□□□□ 0.48
USE1-201ENST00000263897 SLFN12Q8IYM2 578 aa18.05■□□□□ 0.48
USE1-201ENST00000263897 CMTR2Q8IYT2 770 aaKnown RBP18.05■□□□□ 0.48
USE1-201ENST00000263897 HLA-CQ95604 372 aa18.05■□□□□ 0.48
USE1-201ENST00000263897 SH2D3AQ9BRG2 576 aa18.05■□□□□ 0.48
USE1-201ENST00000263897 LLPHQ9BRT6 129 aaKnown RBP18.05■□□□□ 0.48
USE1-201ENST00000263897 RNF216Q9NWF9 866 aaPredicted RBP18.05■□□□□ 0.48
USE1-201ENST00000263897 LRFN2Q9ULH4 789 aa18.05■□□□□ 0.48
USE1-201ENST00000263897 PCDHB7Q9Y5E2 793 aa18.05■□□□□ 0.48
USE1-201ENST00000263897 RALGAPA2Q2PPJ7 1873 aa18.05■□□□□ 0.48
USE1-201ENST00000263897 DKC1O60832 514 aaKnown RBP eCLIP18.04■□□□□ 0.48
USE1-201ENST00000263897 MAFO75444 373 aaPredicted RBP18.04■□□□□ 0.48
USE1-201ENST00000263897 BMP1P13497 986 aa18.04■□□□□ 0.48
USE1-201ENST00000263897 CTNNB1P35222 781 aa18.04■□□□□ 0.48
USE1-201ENST00000263897 DNM2P50570 870 aa18.04■□□□□ 0.48
USE1-201ENST00000263897 GPC3P51654 580 aa18.04■□□□□ 0.48
USE1-201ENST00000263897 CDC42EP1Q00587 391 aa18.04■□□□□ 0.48
USE1-201ENST00000263897 DSC3Q14574 896 aa18.04■□□□□ 0.48
USE1-201ENST00000263897 ZNF668Q96K58 619 aaPredicted RBP18.04■□□□□ 0.48
USE1-201ENST00000263897 DARSP14868 501 aaKnown RBP18.03■□□□□ 0.48
USE1-201ENST00000263897 RBM25P49756 843 aaKnown RBP18.03■□□□□ 0.48
USE1-201ENST00000263897 SPIRE1Q08AE8 756 aa18.03■□□□□ 0.48
USE1-201ENST00000263897 DRP2Q13474 957 aa18.03■□□□□ 0.48
USE1-201ENST00000263897 C11orf84Q9BUA3 381 aaPredicted RBP18.03■□□□□ 0.48
USE1-201ENST00000263897 PLVAPQ9BX97 442 aa18.03■□□□□ 0.48
USE1-201ENST00000263897 CYP26B1Q9NR63 512 aa18.03■□□□□ 0.48
USE1-201ENST00000263897 PCDHA12Q9UN75 941 aa18.03■□□□□ 0.48
USE1-201ENST00000263897 IBSPP21815 317 aaPredicted RBP18.02■□□□□ 0.48
USE1-201ENST00000263897 GATMP50440 423 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms