RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 S1PR5Q9H228 398 aa10.18□□□□□ -0.78
LCN1-201ENST00000263598 CWH43Q9H720 699 aa10.18□□□□□ -0.78
LCN1-201ENST00000263598 CDHR5Q9HBB8 845 aa10.18□□□□□ -0.78
LCN1-201ENST00000263598 TCEAL9Q9UHQ7 104 aa10.18□□□□□ -0.78
LCN1-201ENST00000263598 CEP131Q9UPN4 1083 aa10.18□□□□□ -0.78
LCN1-201ENST00000263598 NR2E1Q9Y466 385 aa10.18□□□□□ -0.78
LCN1-201ENST00000263598 KIAA1671Q9BY89 1806 aa10.18□□□□□ -0.78
LCN1-201ENST00000263598 TRIOO75962 3097 aa10.18□□□□□ -0.78
LCN1-201ENST00000263598 ZNF318Q5VUA4 2279 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 CNTNAP5Q8WYK1 1306 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 TECTAO75443 2155 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 IPO5O00410 1097 aaKnown RBP10.17□□□□□ -0.78
LCN1-201ENST00000263598 GFRA3O60609 400 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 C22orf31O95567 290 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 ZSCAN20P17040 1043 aaPredicted RBP10.17□□□□□ -0.78
LCN1-201ENST00000263598 AVPR2P30518 371 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 VCPP55072 806 aaKnown RBP10.17□□□□□ -0.78
LCN1-201ENST00000263598 APOBRQ0VD83 1088 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 KCNC3Q14003 757 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 BMS1Q14692 1282 aaKnown RBP10.17□□□□□ -0.78
LCN1-201ENST00000263598 TPRNQ4KMQ1 711 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 CES5AQ6NT32 575 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 LLGL2Q6P1M3 1020 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 APOA5Q6Q788 366 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 KCNT2Q6UVM3 1135 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 FAM228AQ86W67 206 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 PLA2G4DQ86XP0 818 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 CCDC60Q8IWA6 550 aaPredicted RBP10.17□□□□□ -0.78
LCN1-201ENST00000263598 ZNF710Q8N1W2 664 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 LRRC43Q8N309 656 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 METTL13Q8N6R0 699 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 BBXQ8WY36 941 aaPredicted RBP10.17□□□□□ -0.78
LCN1-201ENST00000263598 CASP10Q92851 521 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 ATOH1Q92858 354 aaPredicted RBP10.17□□□□□ -0.78
LCN1-201ENST00000263598 SNX27Q96L92 541 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 ZNF558Q96NG5 402 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 PPP1R16BQ96T49 567 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 TSHZ2Q9NRE2 1034 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 BARHL2Q9NY43 387 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 HCSTQ9UBK5 93 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 V9GY48 417 aaPredicted RBP10.17□□□□□ -0.78
LCN1-201ENST00000263598 PLXNA4Q9HCM2 1894 aa10.17□□□□□ -0.78
LCN1-201ENST00000263598 ZBTB42B2RXF5 422 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 MAGEB2O15479 319 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 ZBTB43O43298 467 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 GPR32O75388 356 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 VTNP04004 478 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 TMOD1P28289 359 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 CLK2P49760 499 aaKnown RBP10.16□□□□□ -0.78
LCN1-201ENST00000263598 SETQ01105 290 aaPredicted RBP10.16□□□□□ -0.78
LCN1-201ENST00000263598 ITIH3Q06033 890 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 MTMR3Q13615 1198 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 RTN1Q16799 776 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 RNF20Q5VTR2 975 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 CREB3L3Q68CJ9 461 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 MCTP2Q6DN12 878 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 TYW1BQ6NUM6 668 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 ZNF746Q6NUN9 644 aaPredicted RBP10.16□□□□□ -0.78
LCN1-201ENST00000263598 SYCE2Q6PIF2 218 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 TRMT1LQ7Z2T5 733 aaKnown RBP10.16□□□□□ -0.78
LCN1-201ENST00000263598 TMC7Q7Z402 723 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 SMAP1Q8IYB5 467 aaPredicted RBP10.16□□□□□ -0.78
LCN1-201ENST00000263598 UBALD2Q8IYN6 164 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 RIPOR3Q96MK2 946 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 NECTIN4Q96NY8 510 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 CASD1Q96PB1 797 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 MAP7D2Q96T17 732 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 ZNF577Q9BSK1 485 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 APOL5Q9BWW9 433 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 LSG1Q9H089 658 aaKnown RBP10.16□□□□□ -0.78
LCN1-201ENST00000263598 TBC1D22BQ9NU19 505 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 FAM86C1Q9NVL1 165 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 SPG21Q9NZD8 308 aa10.16□□□□□ -0.78
LCN1-201ENST00000263598 HIDE1A8MVS5 230 aa10.15□□□□□ -0.78
LCN1-201ENST00000263598 FAM86B1E9PN63 330 aa10.15□□□□□ -0.78
LCN1-201ENST00000263598 DHX15O43143 795 aaKnown RBP10.15□□□□□ -0.78
LCN1-201ENST00000263598 PSAPP07602 524 aa10.15□□□□□ -0.78
LCN1-201ENST00000263598 FAM86B2P0C5J1 330 aa10.15□□□□□ -0.78
LCN1-201ENST00000263598 ATP4AP20648 1035 aa10.15□□□□□ -0.78
LCN1-201ENST00000263598 SP100P23497 879 aaPredicted RBP10.15□□□□□ -0.78
LCN1-201ENST00000263598 EIF4BP23588 611 aaKnown RBP10.15□□□□□ -0.78
LCN1-201ENST00000263598 COL9A3Q14050 684 aaPredicted RBP10.15□□□□□ -0.78
LCN1-201ENST00000263598 DSC3Q14574 896 aa10.15□□□□□ -0.78
LCN1-201ENST00000263598 SMC1AQ14683 1233 aaKnown RBP10.15□□□□□ -0.78
LCN1-201ENST00000263598 NECTIN1Q15223 517 aa10.15□□□□□ -0.78
LCN1-201ENST00000263598 LRRC55Q6ZSA7 311 aa10.15□□□□□ -0.78
LCN1-201ENST00000263598 MRPL43Q8N983 215 aaKnown RBP10.15□□□□□ -0.78
LCN1-201ENST00000263598 RNF169Q8NCN4 708 aa10.15□□□□□ -0.78
LCN1-201ENST00000263598 KREMEN2Q8NCW0 462 aa10.15□□□□□ -0.78
LCN1-201ENST00000263598 FAM167AQ96KS9 214 aa10.15□□□□□ -0.78
LCN1-201ENST00000263598 ESYT1Q9BSJ8 1104 aa10.15□□□□□ -0.78
LCN1-201ENST00000263598 ADAM7Q9H2U9 754 aa10.15□□□□□ -0.78
LCN1-201ENST00000263598 ANO2Q9NQ90 1003 aa10.15□□□□□ -0.78
LCN1-201ENST00000263598 SORCS3Q9UPU3 1222 aa10.15□□□□□ -0.78
LCN1-201ENST00000263598 AKT3Q9Y243 479 aa10.15□□□□□ -0.78
LCN1-201ENST00000263598 SAMM50Q9Y512 469 aa10.15□□□□□ -0.78
LCN1-201ENST00000263598 PCDHA10Q9Y5I2 948 aa10.15□□□□□ -0.78
LCN1-201ENST00000263598 MAFBQ9Y5Q3 323 aaPredicted RBP10.15□□□□□ -0.78
LCN1-201ENST00000263598 HCFC2Q9Y5Z7 792 aa10.15□□□□□ -0.78
LCN1-201ENST00000263598 USP34Q70CQ2 3546 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms