RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 SH3GLB2Q9NR46 395 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 GEMIN8Q9NWZ8 242 aaKnown RBP14.14□□□□□ -0.15
SNX1-201ENST00000261889 H0YGN5 161 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 PGRMC1O00264 195 aaKnown RBP14.14□□□□□ -0.15
SNX1-201ENST00000261889 UFL1O94874 794 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 SCTRP47872 440 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 ARSHQ5FYA8 562 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 HP1BP3Q5SSJ5 553 aaPredicted RBP14.14□□□□□ -0.15
SNX1-201ENST00000261889 TRAPPC3LQ5T215 181 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 NSMFQ6X4W1 530 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 IRF2BP2Q7Z5L9 587 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 TRIM59Q8IWR1 403 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 FBXO25Q8TCJ0 367 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 CTNNAL1Q9UBT7 734 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 TBK1Q9UHD2 729 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 NFS1Q9Y697 457 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 DDX3XO00571 662 aaKnown RBP eCLIP14.14□□□□□ -0.15
SNX1-201ENST00000261889 PJA2O43164 708 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 YY1P25490 414 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 SSTR3P32745 418 aaPredicted RBP14.14□□□□□ -0.15
SNX1-201ENST00000261889 PRPHP41219 470 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 GALCP54803 685 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 PPP2R2AP63151 447 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 SNX1Q13596 522 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 CACNA2D3Q8IZS8 1091 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 FUKQ8N0W3 1084 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 KCNV2Q8TDN2 545 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 STAMBPL1Q96FJ0 436 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 P2RX7Q99572 595 aaKnown RBP14.14□□□□□ -0.15
SNX1-201ENST00000261889 BHMT2Q9H2M3 363 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 SLC12A6Q9UHW9 1150 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 ZNF652Q9Y2D9 606 aa14.14□□□□□ -0.15
SNX1-201ENST00000261889 LCA5LO95447 670 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 PON1P27169 355 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 BAG6P46379 1132 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 ERFP50548 548 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 LRRC63Q05C16 580 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 ANKRD20A8PQ5CZ79 823 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 DCAF12L1Q5VU92 463 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 FLAD1Q8NFF5 587 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 TPCN2Q8NHX9 752 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 KRT35Q92764 455 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 CEP89Q96ST8 783 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 REEP2Q9BRK0 252 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 GANQ9H2C0 597 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 SEMA4AQ9H3S1 761 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 ABCF3Q9NUQ8 709 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 ZNF219Q9P2Y4 722 aaPredicted RBP14.13□□□□□ -0.15
SNX1-201ENST00000261889 ARMCX3Q9UH62 379 aaPredicted RBP14.13□□□□□ -0.15
SNX1-201ENST00000261889 PCDHGC5Q9Y5F6 944 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 C6orf229H3BNL8 230 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 PIAS1O75925 651 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 PRLRP16471 622 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 CYP11B2P19099 503 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 MYO1EQ12965 1108 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 CTTNQ14247 550 aaKnown RBP14.13□□□□□ -0.15
SNX1-201ENST00000261889 ZCWPW2Q504Y3 356 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 ZNF662Q6ZS27 426 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 CAPN12Q6ZSI9 719 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 DEFB132Q7Z7B7 95 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 PRUNE1Q86TP1 453 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 PARP9Q8IXQ6 854 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 LRRC34Q8IZ02 419 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 JMJD4Q9H9V9 463 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 ANKRD63C9JTQ0 380 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 ACSL3O95573 720 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 MMEP08473 750 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 CCDC172P0C7W6 258 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 NF2P35240 595 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 HSPA9P38646 679 aaKnown RBP14.13□□□□□ -0.15
SNX1-201ENST00000261889 PEX19P40855 299 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 SLC29A2Q14542 456 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 SBK1Q52WX2 424 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 TMC3Q7Z5M5 1100 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 RUSC1Q9BVN2 902 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 ISCUQ9H1K1 167 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 PCIF1Q9H4Z3 704 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 PSTPIP2Q9H939 334 aa14.13□□□□□ -0.15
SNX1-201ENST00000261889 MYH1P12882 1939 aa14.12□□□□□ -0.15
SNX1-201ENST00000261889 MYH4Q9Y623 1939 aa14.12□□□□□ -0.15
SNX1-201ENST00000261889 SSU72P8A0A1W2PR75 194 aa14.12□□□□□ -0.15
SNX1-201ENST00000261889 HMGB1P1B2RPK0 211 aaPredicted RBP14.12□□□□□ -0.15
SNX1-201ENST00000261889 DDX39AO00148 427 aaKnown RBP14.12□□□□□ -0.15
SNX1-201ENST00000261889 CETN3O15182 167 aa14.12□□□□□ -0.15
SNX1-201ENST00000261889 TRAPPC3O43617 180 aa14.12□□□□□ -0.15
SNX1-201ENST00000261889 FSBPO95073 299 aa14.12□□□□□ -0.15
SNX1-201ENST00000261889 BAG3O95817 575 aa14.12□□□□□ -0.15
SNX1-201ENST00000261889 HOXD13P35453 343 aa14.12□□□□□ -0.15
SNX1-201ENST00000261889 GTF2IP78347 998 aa14.12□□□□□ -0.15
SNX1-201ENST00000261889 SLC20A1Q8WUM9 679 aa14.12□□□□□ -0.15
SNX1-201ENST00000261889 ALG3Q92685 438 aa14.12□□□□□ -0.15
SNX1-201ENST00000261889 RPGRQ92834 1020 aaKnown RBP14.12□□□□□ -0.15
SNX1-201ENST00000261889 THAP2Q9H0W7 228 aa14.12□□□□□ -0.15
SNX1-201ENST00000261889 KLRG2A4D1S0 409 aaPredicted RBP14.12□□□□□ -0.15
SNX1-201ENST00000261889 USP11P51784 963 aa14.12□□□□□ -0.15
SNX1-201ENST00000261889 RNASELQ05823 741 aaKnown RBP14.12□□□□□ -0.15
SNX1-201ENST00000261889 MICALCLQ6ZW33 695 aa14.12□□□□□ -0.15
SNX1-201ENST00000261889 ILDR2Q71H61 639 aa14.12□□□□□ -0.15
SNX1-201ENST00000261889 ZFPM1Q8IX07 1006 aa14.12□□□□□ -0.15
SNX1-201ENST00000261889 SLC35G2Q8TBE7 412 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms