RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 SNX25Q9H3E2 840 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 ARPP21Q9UBL0 812 aaPredicted RBP11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 NCK2O43639 380 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 RINLQ6ZS11 566 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 DHX40Q8IX18 779 aaKnown RBP11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 DCAF5Q96JK2 942 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 NDST4Q9H3R1 872 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 SYNGAP1Q96PV0 1343 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 MYL1P05976 194 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 KLHL38Q2WGJ6 581 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 SH3GL1Q99961 368 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 FLT4P35916 1363 aa11.49□□□□□ -0.57
SLC6A4-201ENST00000261707 PHF20L1A8MW92 1017 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 DDX42Q86XP3 938 aaKnown RBP eCLIP11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 KIAA0825Q8IV33 1275 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 SH2D3CQ8N5H7 860 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 DDX17Q92841 729 aaKnown RBP11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 SPATA17Q96L03 361 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 MRPL47Q9HD33 250 aaKnown RBP11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 OLA1Q9NTK5 396 aaKnown RBP11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 ABCF3Q9NUQ8 709 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 PKD2L2Q9NZM6 624 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 KIF17Q9P2E2 1029 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 COL17A1Q9UMD9 1497 aaPredicted RBP11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 MAGEA13PA6NCF6 341 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 RNMTO43148 476 aaKnown RBP11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 CHN1P15882 459 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 COG4Q9H9E3 785 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 CPSF3Q9UKF6 684 aaKnown RBP11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 COPG1Q9Y678 874 aaKnown RBP11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 POTEB3A0JP26 581 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 CLRN2A0PK11 232 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 PPEF1O14829 653 aaPredicted RBP11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 XPOTO43592 962 aaKnown RBP11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 WDR47O94967 919 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 VCAM1P19320 739 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 SCNN1DP51172 638 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 ARL4CP56559 192 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 FOXD4Q12950 439 aaPredicted RBP11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 EFTUD2Q15029 972 aaKnown RBP eCLIP11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 RABGAP1LQ5R372 815 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 POTEBQ6S5H4 581 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 PGBD1Q96JS3 809 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 COQ7Q99807 217 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 USP15Q9Y4E8 981 aaPredicted RBP11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 UHRF1BP1LA0JNW5 1464 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 DDAH1O94760 285 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 CHEK2O96017 543 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 TFRCP02786 760 aaKnown RBP11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 ATP1A1P05023 1023 aaKnown RBP11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 GNAT1P11488 350 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 CCNE1P24864 410 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 ZC3H12BQ5HYM0 836 aaKnown RBP11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 OR9Q1Q8NGQ5 310 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 RNF217Q8TC41 542 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 TBC1D22AQ8WUA7 517 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 CARD9Q9H257 536 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 ADGRG1Q9Y653 693 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 PAPOLAP51003 745 aaKnown RBP11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 FKBP3Q00688 224 aaKnown RBP11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 CYB5D1Q6P9G0 228 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 TRPM8Q7Z2W7 1104 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 PLD3Q8IV08 490 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 CYFIP2Q96F07 1278 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 UBE2TQ9NPD8 197 aaPredicted RBP11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 SLC12A6Q9UHW9 1150 aa11.48□□□□□ -0.57
SLC6A4-201ENST00000261707 SYNJ2BP-COX16A0A087WUM0 186 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 ENO1P06733 434 aaKnown RBP11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 MORF4L2Q15014 288 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 RSRC2Q7L4I2 434 aaKnown RBP11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 WDR24Q96S15 920 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 ADNPQ9H2P0 1102 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 DIABLOQ9NR28 239 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 COX16Q9P0S2 106 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 A0A1B0GW55 424 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 LARGE1O95461 756 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 DUX4L2P0CJ85 424 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 DUX4L3P0CJ86 424 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 DUX4L4P0CJ87 422 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 DUX4L5P0CJ88 424 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 DUX4L6P0CJ89 424 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 DUX4L7P0CJ90 424 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 ALKBH5Q6P6C2 394 aaKnown RBP11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 IFNL3Q8IZI9 196 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 ZNF513Q8N8E2 541 aaPredicted RBP11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 DDHD1Q8NEL9 900 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 ARL8AQ96BM9 186 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 FAM89AQ96GI7 184 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 COPRSQ9NQ92 184 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 DUX4Q9UBX2 424 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 SUN2Q9UH99 717 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 KIAA1024Q9UPX6 916 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 KBTBD13C9JR72 458 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 CHL1O00533 1208 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 LSP1P33241 339 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 S100A5P33763 92 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 TRAPPC10P48553 1259 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 ERFP50548 548 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 LRIG3Q6UXM1 1119 aa11.47□□□□□ -0.57
SLC6A4-201ENST00000261707 AK8Q96MA6 479 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms