RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 NCCRP1Q6ZVX7 275 aaPredicted RBP13.95□□□□□ -0.18
TMEM260-201ENST00000261556 IFNL3Q8IZI9 196 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 CMTR1Q8N1G2 835 aaKnown RBP13.95□□□□□ -0.18
TMEM260-201ENST00000261556 RBBP8NLQ8NC74 664 aaPredicted RBP13.95□□□□□ -0.18
TMEM260-201ENST00000261556 FAM161BQ96MY7 647 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 ADAM22Q9P0K1 906 aa13.95□□□□□ -0.18
TMEM260-201ENST00000261556 TSPOAP1O95153 1857 aa13.94□□□□□ -0.18
TMEM260-201ENST00000261556 KRT75O95678 551 aa13.94□□□□□ -0.18
TMEM260-201ENST00000261556 THOC7Q6I9Y2 204 aaKnown RBP13.94□□□□□ -0.18
TMEM260-201ENST00000261556 SCUBE1Q8IWY4 988 aa13.94□□□□□ -0.18
TMEM260-201ENST00000261556 KIAA2013Q8IYS2 634 aa13.94□□□□□ -0.18
TMEM260-201ENST00000261556 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.94□□□□□ -0.186e-6■■□□□ 12.3
TMEM260-201ENST00000261556 PTCH1Q13635 1447 aa13.94□□□□□ -0.18
TMEM260-201ENST00000261556 H7C1D1 291 aa13.94□□□□□ -0.18
TMEM260-201ENST00000261556 MCF2LO15068 1137 aa13.94□□□□□ -0.18
TMEM260-201ENST00000261556 CCNT1O60563 726 aaKnown RBP13.94□□□□□ -0.18
TMEM260-201ENST00000261556 ACADSP16219 412 aa13.94□□□□□ -0.18
TMEM260-201ENST00000261556 DNM2P50570 870 aa13.94□□□□□ -0.18
TMEM260-201ENST00000261556 TBX2Q13207 712 aaPredicted RBP13.94□□□□□ -0.18
TMEM260-201ENST00000261556 SV2BQ7L1I2 683 aa13.94□□□□□ -0.18
TMEM260-201ENST00000261556 LENG1Q96BZ8 264 aaPredicted RBP13.94□□□□□ -0.18
TMEM260-201ENST00000261556 TSPAN18Q96SJ8 248 aa13.94□□□□□ -0.18
TMEM260-201ENST00000261556 AMACRQ9UHK6 382 aa13.94□□□□□ -0.18
TMEM260-201ENST00000261556 TUBE1Q9UJT0 475 aa13.94□□□□□ -0.18
TMEM260-201ENST00000261556 GGA2Q9UJY4 613 aa13.94□□□□□ -0.18
TMEM260-201ENST00000261556 PALMO75781 387 aa13.94□□□□□ -0.18
TMEM260-201ENST00000261556 ACSL3O95573 720 aa13.94□□□□□ -0.18
TMEM260-201ENST00000261556 MYCLP12524 364 aaPredicted RBP13.94□□□□□ -0.18
TMEM260-201ENST00000261556 ZNF654Q8IZM8 581 aa13.94□□□□□ -0.18
TMEM260-201ENST00000261556 ZBTB8BQ8NAP8 495 aaPredicted RBP13.94□□□□□ -0.18
TMEM260-201ENST00000261556 HAUS7Q99871 368 aa13.94□□□□□ -0.18
TMEM260-201ENST00000261556 SNX24Q9Y343 169 aa13.94□□□□□ -0.18
TMEM260-201ENST00000261556 MYOM2P54296 1465 aa13.94□□□□□ -0.18
TMEM260-201ENST00000261556 SETD1BQ9UPS6 1966 aaKnown RBP13.94□□□□□ -0.18
TMEM260-201ENST00000261556 HARSP12081 509 aaKnown RBP13.93□□□□□ -0.18
TMEM260-201ENST00000261556 ATP2B4P23634 1241 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 ARPC4P59998 168 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 TTC38Q5R3I4 469 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 DPH6Q7L8W6 267 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 KRT27Q7Z3Y8 459 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 LZICQ8WZA0 190 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 CNGB3Q9NQW8 809 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 EURLQ9NYK6 297 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 FRMD4BQ9Y2L6 1034 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 CAPN6Q9Y6Q1 641 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 PRDM15P57071 1507 aaPredicted RBP13.93□□□□□ -0.18
TMEM260-201ENST00000261556 BICDL2A1A5D9 508 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 CFAP69A5D8W1 941 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 LCA5LO95447 670 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 NONOQ15233 471 aaKnown RBP eCLIP13.93□□□□□ -0.18
TMEM260-201ENST00000261556 TRIML2Q8N7C3 387 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 CSRNP2Q9H175 543 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 TLR7Q9NYK1 1049 aaKnown RBP13.93□□□□□ -0.18
TMEM260-201ENST00000261556 KIF28PB7ZC32 967 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 CYP27B1O15528 508 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 TUBP50607 506 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 NCALDP61601 193 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 MED21Q13503 144 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 ITGA7Q13683 1181 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 PAPD7Q5XG87 772 aaKnown RBP13.93□□□□□ -0.18
TMEM260-201ENST00000261556 TTC16Q8NEE8 873 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 U2AF1L4Q8WU68 220 aaKnown RBP13.93□□□□□ -0.18
TMEM260-201ENST00000261556 FAM129AQ9BZQ8 928 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 RANBP17Q9H2T7 1088 aaKnown RBP13.93□□□□□ -0.18
TMEM260-201ENST00000261556 WDR37Q9Y2I8 494 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 KDM5AP29375 1690 aaKnown RBP13.93□□□□□ -0.18
TMEM260-201ENST00000261556 ABL2P42684 1182 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 CUL1Q13616 776 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 KPNB1Q14974 876 aaKnown RBP13.93□□□□□ -0.18
TMEM260-201ENST00000261556 C16orf72Q14CZ0 275 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 UTS2BQ765I0 119 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 CNKSR1Q969H4 720 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 TUBGCP2Q9BSJ2 902 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 SATB2Q9UPW6 733 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 AXIN2Q9Y2T1 843 aa13.93□□□□□ -0.18
TMEM260-201ENST00000261556 ZNF804BA4D1E1 1349 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 PASKQ96RG2 1323 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 KIF24Q5T7B8 1368 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 TRIM49BA6NDI0 452 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 SERPINB2P05120 415 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 ESRRAP11474 423 aaPredicted RBP13.92□□□□□ -0.18
TMEM260-201ENST00000261556 DRD4P21917 467 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 EPHB2P29323 1055 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 PPP2R5BQ15173 497 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 C14orf80Q86SX3 495 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 ZFAND2BQ8WV99 257 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 NT5C3AQ9H0P0 336 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 AGPAT5Q9NUQ2 364 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 NDE1Q9NXR1 346 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 BARX2Q9UMQ3 279 aaPredicted RBP13.92□□□□□ -0.18
TMEM260-201ENST00000261556 SUGT1Q9Y2Z0 365 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 EIF3BP55884 814 aaKnown RBP13.92□□□□□ -0.18
TMEM260-201ENST00000261556 PDE4DQ08499 809 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 ACAP1Q15027 740 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 TRADDQ15628 312 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 TCP11X2Q5H9J9 407 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 AGGF1Q8N302 714 aaeCLIP13.92□□□□□ -0.18
TMEM260-201ENST00000261556 MARCH10Q8NA82 808 aaPredicted RBP13.92□□□□□ -0.18
TMEM260-201ENST00000261556 TTC8Q8TAM2 541 aa13.92□□□□□ -0.18
TMEM260-201ENST00000261556 RIPK1Q13546 671 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms