RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 AIPL1Q9NZN9 384 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 KLHL14Q9P2G3 628 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 SUCLA2Q9P2R7 463 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-201ENST00000261443 SNX24Q9Y343 169 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 BCORQ6W2J9 1755 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 NHSL1Q5SYE7 1610 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 DCCP43146 1447 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 LAD1O00515 517 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 PYGBP11216 843 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 POU5F1Q01860 360 aaKnown RBP7.82□□□□□ -1.16
CSDE1-201ENST00000261443 RNASELQ05823 741 aaKnown RBP7.82□□□□□ -1.16
CSDE1-201ENST00000261443 KLRC3Q07444 240 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 FBXO25Q8TCJ0 367 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 TXLNGQ9NUQ3 528 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 PCMTD2Q9NV79 361 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 CNOT7Q9UIV1 285 aaKnown RBP7.82□□□□□ -1.16
CSDE1-201ENST00000261443 NR2E1Q9Y466 385 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 COL4A3BPQ9Y5P4 624 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 TNS2Q63HR2 1409 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 SLIT2O94813 1529 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 H0Y3Z8 333 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 TRAF5O00463 557 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 EPS15P42566 896 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 PTDSS1P48651 473 aaKnown RBP7.82□□□□□ -1.16
CSDE1-201ENST00000261443 PTENP60484 403 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 USP4Q13107 963 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 AUHQ13825 339 aaKnown RBP7.82□□□□□ -1.16
CSDE1-201ENST00000261443 PDIA5Q14554 519 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 LRRC41Q15345 812 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 PUM3Q15397 648 aaKnown RBP7.82□□□□□ -1.16
CSDE1-201ENST00000261443 PARP6Q2NL67 630 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 CCDC152Q4G0S7 254 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 ALKBH5Q6P6C2 394 aaKnown RBP7.82□□□□□ -1.16
CSDE1-201ENST00000261443 OTUD6AQ7L8S5 288 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 EXOC3L1Q86VI1 746 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.82□□□□□ -1.161e-6■■■■■ 34.7
CSDE1-201ENST00000261443 SYCE1Q8N0S2 351 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 ANKRD42Q8N9B4 389 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 ZBTB38Q8NAP3 1195 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-201ENST00000261443 GLG1Q92896 1179 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 CALML4Q96GE6 196 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 PLA2G12BQ9BX93 195 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 MLXIPLQ9NP71 852 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 LRP2BPQ9P2M1 347 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 PRKAG3Q9UGI9 489 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 SCOCQ9UIL1 159 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 ANAPC4Q9UJX5 808 aa7.82□□□□□ -1.16
CSDE1-201ENST00000261443 CCDC88AQ3V6T2 1871 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 CYP2D7A0A087X1C5 515 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 TMEM120BA0PK00 339 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 FGFR4P22455 802 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 COPB2P35606 906 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 TECP42680 631 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 KIAA1755Q5JYT7 1200 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 UBAP2Q5T6F2 1119 aaKnown RBP7.81□□□□□ -1.16
CSDE1-201ENST00000261443 IRGCQ6NXR0 463 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 BTNL9Q6UXG8 535 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 BARGINQ6ZT62 677 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 UNC13DQ70J99 1090 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 INTS8Q75QN2 995 aaKnown RBP7.81□□□□□ -1.16
CSDE1-201ENST00000261443 ZNF571Q7Z3V5 609 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-201ENST00000261443 NT5DC3Q86UY8 548 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 VSIG1Q86XK7 387 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 AGGF1Q8N302 714 aaeCLIP7.81□□□□□ -1.16
CSDE1-201ENST00000261443 GDAP1Q8TB36 358 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 ASAP3Q8TDY4 903 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 NAP1L3Q99457 506 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-201ENST00000261443 PPP1R12CQ9BZL4 782 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 KANSL2Q9H9L4 492 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 KCNK9Q9NPC2 374 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 NAGPAQ9UK23 515 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 PCDHA6Q9UN73 950 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 STXBP5LQ9Y2K9 1186 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 PCDHA8Q9Y5H6 950 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.81□□□□□ -1.16
CSDE1-201ENST00000261443 RPTORQ8N122 1335 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 PVALEFA0A1B0GWK0 134 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 FAM187AA6NFU0 413 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 MYMKA6NI61 221 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 BAG3O95817 575 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 OR52Z1P0C646 297 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 CYP7A1P22680 504 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 FKBP3Q00688 224 aaKnown RBP7.81□□□□□ -1.16
CSDE1-201ENST00000261443 RNF43Q68DV7 783 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 OR52E8Q6IFG1 317 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 MAIP1Q8WWC4 291 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 DTNBP1Q96EV8 351 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 TRAPPC9Q96Q05 1148 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 TMEM109Q9BVC6 243 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 RIC8AQ9NPQ8 531 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.81□□□□□ -1.161e-11■■□□□ 14.1
CSDE1-201ENST00000261443 CTTNBP2NLQ9P2B4 639 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 CTNNAL1Q9UBT7 734 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 MTRF1LQ9UGC7 380 aaKnown RBP7.81□□□□□ -1.16
CSDE1-201ENST00000261443 RASAL2Q9UJF2 1139 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 AMFRQ9UKV5 643 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 MYH3P11055 1940 aa7.81□□□□□ -1.16
CSDE1-201ENST00000261443 COL5A2P05997 1499 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-201ENST00000261443 NMT2O60551 498 aa7.8□□□□□ -1.16
CSDE1-201ENST00000261443 MGAT5Q09328 741 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms