RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 ZNF844Q08AG5 666 aa17.57■□□□□ 0.4
SNCAIP-202ENST00000261368 COG2Q14746 738 aa17.57■□□□□ 0.4
SNCAIP-202ENST00000261368 E2F5Q15329 346 aa17.57■□□□□ 0.4
SNCAIP-202ENST00000261368 GKAP1Q5VSY0 366 aaPredicted RBP17.57■□□□□ 0.4
SNCAIP-202ENST00000261368 CCDC91Q7Z6B0 441 aa17.57■□□□□ 0.4
SNCAIP-202ENST00000261368 HOOK2Q96ED9 719 aa17.57■□□□□ 0.4
SNCAIP-202ENST00000261368 SH2D3AQ9BRG2 576 aa17.57■□□□□ 0.4
SNCAIP-202ENST00000261368 CD248Q9HCU0 757 aa17.57■□□□□ 0.4
SNCAIP-202ENST00000261368 PNMA2Q9UL42 364 aa17.57■□□□□ 0.4
SNCAIP-202ENST00000261368 DDX3XO00571 662 aaKnown RBP eCLIP17.56■□□□□ 0.4
SNCAIP-202ENST00000261368 FAM107AO95990 144 aa17.56■□□□□ 0.4
SNCAIP-202ENST00000261368 GUCY2CP25092 1073 aa17.56■□□□□ 0.4
SNCAIP-202ENST00000261368 HSPA9P38646 679 aaKnown RBP17.56■□□□□ 0.4
SNCAIP-202ENST00000261368 PIK3R5Q8WYR1 880 aa17.56■□□□□ 0.4
SNCAIP-202ENST00000261368 RAB17Q9H0T7 212 aa17.56■□□□□ 0.4
SNCAIP-202ENST00000261368 AJAP1Q9UKB5 411 aaPredicted RBP17.56■□□□□ 0.4
SNCAIP-202ENST00000261368 DCDC2CA8MYV0 355 aa17.56■□□□□ 0.4
SNCAIP-202ENST00000261368 CCDC188H7C350 402 aa17.56■□□□□ 0.4
SNCAIP-202ENST00000261368 PPP1R18Q6NYC8 613 aa17.56■□□□□ 0.4
SNCAIP-202ENST00000261368 CCDC105Q8IYK2 499 aa17.56■□□□□ 0.4
SNCAIP-202ENST00000261368 SWAP70Q9UH65 585 aa17.56■□□□□ 0.4
SNCAIP-202ENST00000261368 RGS16O15492 202 aaPredicted RBP17.56■□□□□ 0.4
SNCAIP-202ENST00000261368 SPOPO43791 374 aa17.56■□□□□ 0.4
SNCAIP-202ENST00000261368 SHMT1P34896 483 aa17.56■□□□□ 0.4
SNCAIP-202ENST00000261368 ITGB3BPQ13352 177 aaPredicted RBP17.56■□□□□ 0.4
SNCAIP-202ENST00000261368 EIF2AK1Q9BQI3 630 aaKnown RBP17.56■□□□□ 0.4
SNCAIP-202ENST00000261368 GLT8D2Q9H1C3 349 aa17.56■□□□□ 0.4
SNCAIP-202ENST00000261368 DNAJC17Q9NVM6 304 aaKnown RBP17.56■□□□□ 0.4
SNCAIP-202ENST00000261368 RASAL2Q9UJF2 1139 aa17.56■□□□□ 0.4
SNCAIP-202ENST00000261368 TNFRSF8P28908 595 aa17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 MAP2K2P36507 400 aa17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 SLC12A3P55017 1021 aa17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 LRCH2Q5VUJ6 765 aa17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 CDC42EP5Q6NZY7 148 aa17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 SPATS2Q86XZ4 545 aaKnown RBP17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 PLCB1Q9NQ66 1216 aa17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 SSR1P43307 286 aaKnown RBP17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 MSL1Q68DK7 614 aa17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 AADACL2Q6P093 401 aa17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 DYDC2Q96IM9 177 aa17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 FAM114A2Q9NRY5 505 aa17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 PPP1R9AQ9ULJ8 1098 aa17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 F5H6K3 240 aa17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 PDXKO00764 312 aa17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 GAS7O60861 476 aa17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 CCDC172P0C7W6 258 aa17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 VPS41P49754 854 aa17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 MYL7Q01449 175 aa17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 KLRC3Q07444 240 aa17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 CCDC38Q502W7 563 aa17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 PNMA8AQ86V59 439 aaPredicted RBP17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 NR2E1Q9Y466 385 aa17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 PCDHAC2Q9Y5I4 1007 aa17.55■□□□□ 0.4
SNCAIP-202ENST00000261368 FAM86B1E9PN63 330 aa17.54■□□□□ 0.4
SNCAIP-202ENST00000261368 BBOX1O75936 387 aa17.54■□□□□ 0.4
SNCAIP-202ENST00000261368 FAM86B2P0C5J1 330 aa17.54■□□□□ 0.4
SNCAIP-202ENST00000261368 LMNB1P20700 586 aa17.54■□□□□ 0.4
SNCAIP-202ENST00000261368 ADCY1Q08828 1119 aa17.54■□□□□ 0.4
SNCAIP-202ENST00000261368 RC3H1Q5TC82 1133 aaKnown RBP17.54■□□□□ 0.4
SNCAIP-202ENST00000261368 PSMD1Q99460 953 aa17.54■□□□□ 0.4
SNCAIP-202ENST00000261368 UBE2TQ9NPD8 197 aaPredicted RBP17.54■□□□□ 0.4
SNCAIP-202ENST00000261368 CD2APQ9Y5K6 639 aa17.54■□□□□ 0.4
SNCAIP-202ENST00000261368 CETN1Q12798 172 aa17.54■□□□□ 0.4
SNCAIP-202ENST00000261368 PPP1R7Q15435 360 aa17.54■□□□□ 0.4
SNCAIP-202ENST00000261368 OTUD6AQ7L8S5 288 aa17.54■□□□□ 0.4
SNCAIP-202ENST00000261368 HOOK3Q86VS8 718 aa17.54■□□□□ 0.4
SNCAIP-202ENST00000261368 CCDC13Q8IYE1 715 aa17.54■□□□□ 0.4
SNCAIP-202ENST00000261368 SLC35C1Q96A29 364 aa17.54■□□□□ 0.4
SNCAIP-202ENST00000261368 PPEF1O14829 653 aaPredicted RBP17.54■□□□□ 0.4
SNCAIP-202ENST00000261368 STXBP4Q6ZWJ1 553 aa17.54■□□□□ 0.4
SNCAIP-202ENST00000261368 PHLDB2Q86SQ0 1253 aa17.54■□□□□ 0.4
SNCAIP-202ENST00000261368 THAP2Q9H0W7 228 aa17.54■□□□□ 0.4
SNCAIP-202ENST00000261368 KCNK9Q9NPC2 374 aa17.54■□□□□ 0.4
SNCAIP-202ENST00000261368 BAIAP2L1Q9UHR4 511 aa17.54■□□□□ 0.4
SNCAIP-202ENST00000261368 ARHGEF35A5YM69 484 aa17.53■□□□□ 0.4
SNCAIP-202ENST00000261368 RPA1P27694 616 aa17.53■□□□□ 0.4
SNCAIP-202ENST00000261368 SOX5P35711 763 aa17.53■□□□□ 0.4
SNCAIP-202ENST00000261368 UAP1Q16222 522 aaPredicted RBP17.53■□□□□ 0.4
SNCAIP-202ENST00000261368 SYT2Q8N9I0 419 aaPredicted RBP17.53■□□□□ 0.4
SNCAIP-202ENST00000261368 ACTRT1Q8TDG2 376 aa17.53■□□□□ 0.4
SNCAIP-202ENST00000261368 RAPGEF5Q92565 580 aa17.53■□□□□ 0.4
SNCAIP-202ENST00000261368 PARVGQ9HBI0 331 aa17.53■□□□□ 0.4
SNCAIP-202ENST00000261368 MLXIPLQ9NP71 852 aa17.53■□□□□ 0.4
SNCAIP-202ENST00000261368 GGT7Q9UJ14 662 aa17.53■□□□□ 0.4
SNCAIP-202ENST00000261368 GJC1P36383 396 aa17.53■□□□□ 0.4
SNCAIP-202ENST00000261368 BIRC3Q13489 604 aa17.53■□□□□ 0.4
SNCAIP-202ENST00000261368 NAP1L3Q99457 506 aaPredicted RBP17.53■□□□□ 0.4
SNCAIP-202ENST00000261368 HAUS2Q9NVX0 235 aa17.53■□□□□ 0.4
SNCAIP-202ENST00000261368 MTRF1LQ9UGC7 380 aaKnown RBP17.53■□□□□ 0.4
SNCAIP-202ENST00000261368 MSH4O15457 936 aa17.52■□□□□ 0.4
SNCAIP-202ENST00000261368 ATMINO43313 823 aaPredicted RBP17.52■□□□□ 0.4
SNCAIP-202ENST00000261368 IL1R1P14778 569 aa17.52■□□□□ 0.4
SNCAIP-202ENST00000261368 EPHA7Q15375 998 aa17.52■□□□□ 0.4
SNCAIP-202ENST00000261368 QPCTQ16769 361 aa17.52■□□□□ 0.4
SNCAIP-202ENST00000261368 TBC1D31Q96DN5 1066 aa17.52■□□□□ 0.4
SNCAIP-202ENST00000261368 ROBO1Q9Y6N7 1651 aa17.52■□□□□ 0.4
SNCAIP-202ENST00000261368 LOC102724159A0A0B4J2E5 919 aa17.52■□□□□ 0.4
SNCAIP-202ENST00000261368 EML1O00423 815 aa17.52■□□□□ 0.4
SNCAIP-202ENST00000261368 CAND2O75155 1236 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms