RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 ZNF200P98182 395 aaPredicted RBP23.03■■□□□ 1.28
RTCA-201ENST00000260563 TARBP2Q15633 366 aaKnown RBP23.03■■□□□ 1.28
RTCA-201ENST00000260563 NAALADL2Q58DX5 795 aa23.03■■□□□ 1.28
RTCA-201ENST00000260563 ELOA2Q8IYF1 753 aaPredicted RBP23.03■■□□□ 1.28
RTCA-201ENST00000260563 CUEDC2Q9H467 287 aa23.03■■□□□ 1.28
RTCA-201ENST00000260563 A0A087WWV3 80 aa23.03■■□□□ 1.28
RTCA-201ENST00000260563 E9PMD0 336 aa23.03■■□□□ 1.28
RTCA-201ENST00000260563 TREHO43280 583 aa23.03■■□□□ 1.28
RTCA-201ENST00000260563 ADAM17P78536 824 aa23.03■■□□□ 1.28
RTCA-201ENST00000260563 TLE2Q04725 743 aa23.03■■□□□ 1.28
RTCA-201ENST00000260563 TBC1D8BQ0IIM8 1120 aa23.03■■□□□ 1.28
RTCA-201ENST00000260563 ZSCAN23Q3MJ62 389 aa23.03■■□□□ 1.28
RTCA-201ENST00000260563 MARCH8Q5T0T0 291 aa23.03■■□□□ 1.28
RTCA-201ENST00000260563 KANK3Q6NY19 840 aa23.03■■□□□ 1.28
RTCA-201ENST00000260563 MTHFD1LQ6UB35 978 aa23.03■■□□□ 1.28
RTCA-201ENST00000260563 CCDC34Q96HJ3 373 aa23.03■■□□□ 1.28
RTCA-201ENST00000260563 ANP32EQ9BTT0 268 aa23.03■■□□□ 1.28
RTCA-201ENST00000260563 TRPV6Q9H1D0 765 aa23.03■■□□□ 1.28
RTCA-201ENST00000260563 MBLAC1A4D2B0 266 aaPredicted RBP23.02■■□□□ 1.28
RTCA-201ENST00000260563 CAPN15O75808 1086 aa23.02■■□□□ 1.28
RTCA-201ENST00000260563 LETM1O95202 739 aaPredicted RBP23.02■■□□□ 1.28
RTCA-201ENST00000260563 C22orf31O95567 290 aa23.02■■□□□ 1.28
RTCA-201ENST00000260563 EYA4O95677 639 aa23.02■■□□□ 1.28
RTCA-201ENST00000260563 CD4P01730 458 aa23.02■■□□□ 1.28
RTCA-201ENST00000260563 KCNK18Q7Z418 384 aa23.02■■□□□ 1.28
RTCA-201ENST00000260563 LRRC15Q8TF66 581 aa23.02■■□□□ 1.28
RTCA-201ENST00000260563 BHMT2Q9H2M3 363 aa23.02■■□□□ 1.28
RTCA-201ENST00000260563 STK17AQ9UEE5 414 aa23.02■■□□□ 1.28
RTCA-201ENST00000260563 HOOK1Q9UJC3 728 aaKnown RBP23.02■■□□□ 1.28
RTCA-201ENST00000260563 ARHGEF35A5YM69 484 aa23.01■■□□□ 1.27
RTCA-201ENST00000260563 MAGEB2O15479 319 aa23.01■■□□□ 1.27
RTCA-201ENST00000260563 KLRC1P26715 233 aa23.01■■□□□ 1.27
RTCA-201ENST00000260563 POLGP54098 1239 aaPredicted RBP23.01■■□□□ 1.27
RTCA-201ENST00000260563 RETREG2Q8NC44 543 aa23.01■■□□□ 1.27
RTCA-201ENST00000260563 PAGE5Q96GU1 130 aa23.01■■□□□ 1.27
RTCA-201ENST00000260563 CEP89Q96ST8 783 aa23.01■■□□□ 1.27
RTCA-201ENST00000260563 MAGEF1Q9HAY2 307 aa23.01■■□□□ 1.27
RTCA-201ENST00000260563 SIP14410 1827 aa23■■□□□ 1.27
RTCA-201ENST00000260563 CLTBP09497 229 aa23■■□□□ 1.27
RTCA-201ENST00000260563 CYP2C9P11712 490 aa23■■□□□ 1.27
RTCA-201ENST00000260563 RFC5P40937 340 aa23■■□□□ 1.27
RTCA-201ENST00000260563 PTK7Q13308 1070 aa23■■□□□ 1.27
RTCA-201ENST00000260563 TAF2Q6P1X5 1199 aa23■■□□□ 1.27
RTCA-201ENST00000260563 RBM43Q6ZSC3 357 aaKnown RBP23■■□□□ 1.27
RTCA-201ENST00000260563 SERINC5Q86VE9 423 aa23■■□□□ 1.27
RTCA-201ENST00000260563 EXOC8Q8IYI6 725 aa23■■□□□ 1.27
RTCA-201ENST00000260563 SLC7A3Q8WY07 619 aa23■■□□□ 1.27
RTCA-201ENST00000260563 LARP4BQ92615 738 aaKnown RBP23■■□□□ 1.27
RTCA-201ENST00000260563 ZBTB10Q96DT7 871 aa23■■□□□ 1.27
RTCA-201ENST00000260563 CTAGE1Q96RT6 745 aa23■■□□□ 1.27
RTCA-201ENST00000260563 JPH2Q9BR39 696 aaPredicted RBP23■■□□□ 1.27
RTCA-201ENST00000260563 BLOC1S4Q9NUP1 217 aa23■■□□□ 1.27
RTCA-201ENST00000260563 USO1O60763 962 aaKnown RBP22.99■■□□□ 1.27
RTCA-201ENST00000260563 DGAT1O75907 488 aa22.99■■□□□ 1.27
RTCA-201ENST00000260563 FAAP100Q0VG06 881 aa22.99■■□□□ 1.27
RTCA-201ENST00000260563 SH3RF1Q7Z6J0 888 aa22.99■■□□□ 1.27
RTCA-201ENST00000260563 METTL13Q8N6R0 699 aa22.99■■□□□ 1.27
RTCA-201ENST00000260563 RAD54LQ92698 747 aa22.99■■□□□ 1.27
RTCA-201ENST00000260563 BMP2KQ9NSY1 1161 aaPredicted RBP22.99■■□□□ 1.27
RTCA-201ENST00000260563 PCDHA2Q9Y5H9 948 aa22.99■■□□□ 1.27
RTCA-201ENST00000260563 SYCE3A1L190 88 aa22.98■■□□□ 1.27
RTCA-201ENST00000260563 MAFO75444 373 aaPredicted RBP22.98■■□□□ 1.27
RTCA-201ENST00000260563 SSBP05455 408 aaKnown RBP eCLIP22.98■■□□□ 1.27
RTCA-201ENST00000260563 PLA2G4BP0C869 781 aa22.98■■□□□ 1.27
RTCA-201ENST00000260563 AFMP43652 599 aa22.98■■□□□ 1.27
RTCA-201ENST00000260563 MDM2Q00987 491 aaPredicted RBP22.98■■□□□ 1.27
RTCA-201ENST00000260563 EMC2Q15006 297 aa22.98■■□□□ 1.27
RTCA-201ENST00000260563 POSTNQ15063 836 aa22.98■■□□□ 1.27
RTCA-201ENST00000260563 RUFY4Q6ZNE9 571 aa22.98■■□□□ 1.27
RTCA-201ENST00000260563 GRAMD1CQ8IYS0 662 aa22.98■■□□□ 1.27
RTCA-201ENST00000260563 MTRQ99707 1265 aa22.98■■□□□ 1.27
RTCA-201ENST00000260563 DHX33Q9H6R0 707 aaKnown RBP22.98■■□□□ 1.27
RTCA-201ENST00000260563 ATP6V0A4Q9HBG4 840 aa22.98■■□□□ 1.27
RTCA-201ENST00000260563 LTBP2Q14767 1821 aa22.98■■□□□ 1.27
RTCA-201ENST00000260563 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.98■■□□□ 1.27
RTCA-201ENST00000260563 SMIM35A0A1B0GVV1 85 aa22.98■■□□□ 1.27
RTCA-201ENST00000260563 TMOD1P28289 359 aa22.98■■□□□ 1.27
RTCA-201ENST00000260563 PNOCQ13519 176 aa22.98■■□□□ 1.27
RTCA-201ENST00000260563 EFCAB12Q6NXP0 572 aa22.98■■□□□ 1.27
RTCA-201ENST00000260563 PADI6Q6TGC4 694 aa22.98■■□□□ 1.27
RTCA-201ENST00000260563 C7orf61Q8IZ16 206 aa22.98■■□□□ 1.27
RTCA-201ENST00000260563 LRRC71Q8N4P6 559 aa22.98■■□□□ 1.27
RTCA-201ENST00000260563 CCDC155Q8N6L0 562 aa22.98■■□□□ 1.27
RTCA-201ENST00000260563 SUGCTQ9HAC7 445 aa22.98■■□□□ 1.27
RTCA-201ENST00000260563 PRDM5Q9NQX1 630 aaPredicted RBP22.98■■□□□ 1.27
RTCA-201ENST00000260563 KBTBD4Q9NVX7 518 aa22.98■■□□□ 1.27
RTCA-201ENST00000260563 GAS2O43903 313 aaKnown RBP22.97■■□□□ 1.27
RTCA-201ENST00000260563 EVI5O60447 810 aa22.97■■□□□ 1.27
RTCA-201ENST00000260563 RPLP2P05387 115 aaKnown RBP22.97■■□□□ 1.27
RTCA-201ENST00000260563 SLC12A3P55017 1021 aa22.97■■□□□ 1.27
RTCA-201ENST00000260563 SYT2Q8N9I0 419 aaPredicted RBP22.97■■□□□ 1.27
RTCA-201ENST00000260563 CAGE1Q8TC20 777 aa22.97■■□□□ 1.27
RTCA-201ENST00000260563 STAMQ92783 540 aa22.97■■□□□ 1.27
RTCA-201ENST00000260563 FAM49AQ9H0Q0 323 aaPredicted RBP22.97■■□□□ 1.27
RTCA-201ENST00000260563 PDLIM7Q9NR12 457 aa22.97■■□□□ 1.27
RTCA-201ENST00000260563 TMEM39AQ9NV64 488 aa22.97■■□□□ 1.27
RTCA-201ENST00000260563 IGKV6-21A0A0C4DH24 114 aa22.96■■□□□ 1.27
RTCA-201ENST00000260563 PRR29P0C7W0 189 aa22.96■■□□□ 1.27
RTCA-201ENST00000260563 CLCN3P51790 818 aa22.96■■□□□ 1.27
RTCA-201ENST00000260563 DHX8Q14562 1220 aaKnown RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms