RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 USP11P51784 963 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 ERVK-9P63128 1117 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 ORC2Q13416 577 aaPredicted RBP5.14□□□□□ -1.59
USP44-201ENST00000258499 SYDE2Q5VT97 1194 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 MCTP2Q6DN12 878 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 PPP4R3AQ6IN85 833 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 HIBCHQ6NVY1 386 aaPredicted RBP5.14□□□□□ -1.59
USP44-201ENST00000258499 BANK1Q8NDB2 785 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 NEK9Q8TD19 979 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 HAS1Q92839 578 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 CSRNP1Q96S65 589 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 EIF2AK1Q9BQI3 630 aaKnown RBP5.14□□□□□ -1.59
USP44-201ENST00000258499 ZNF577Q9BSK1 485 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 DDX4Q9NQI0 724 aaKnown RBP5.14□□□□□ -1.59
USP44-201ENST00000258499 FAM114A2Q9NRY5 505 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 TYW1Q9NV66 732 aaKnown RBP5.14□□□□□ -1.59
USP44-201ENST00000258499 TBK1Q9UHD2 729 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 STK38LQ9Y2H1 464 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 FOSP01100 380 aaPredicted RBP5.14□□□□□ -1.59
USP44-201ENST00000258499 HNRNPH1P31943 449 aaKnown RBP5.14□□□□□ -1.59
USP44-201ENST00000258499 PPP2R2AP63151 447 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 BIRC3Q13489 604 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 LRRC14Q15048 493 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 C10orf76Q5T2E6 689 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 MEI1Q5TIA1 1274 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 SLC35G2Q8TBE7 412 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 MYCBPAPQ8TBZ2 947 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 DNAJC19Q96DA6 116 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 ELAC2Q9BQ52 826 aaKnown RBP5.14□□□□□ -1.59
USP44-201ENST00000258499 TACO1Q9BSH4 297 aaKnown RBP5.14□□□□□ -1.59
USP44-201ENST00000258499 RUSC1Q9BVN2 902 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 TDRD3Q9H7E2 651 aaKnown RBP5.14□□□□□ -1.59
USP44-201ENST00000258499 LARSQ9P2J5 1176 aaKnown RBP5.14□□□□□ -1.59
USP44-201ENST00000258499 PI4KBQ9UBF8 816 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 PNMA2Q9UL42 364 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 MYH2Q9UKX2 1941 aa5.14□□□□□ -1.59
USP44-201ENST00000258499 ATMINO43313 823 aaPredicted RBP5.13□□□□□ -1.59
USP44-201ENST00000258499 TOM1O60784 492 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 FTLP02792 175 aaPredicted RBP5.13□□□□□ -1.59
USP44-201ENST00000258499 MMEP08473 750 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 POLR2MP0CAP2 368 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 CTNNA2P26232 953 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 CRKP46108 304 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 NT5C2P49902 561 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 NAA25Q14CX7 972 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 PTGISQ16647 500 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 SHROOM1Q2M3G4 852 aaPredicted RBP5.13□□□□□ -1.59
USP44-201ENST00000258499 CDC42EP5Q6NZY7 148 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 MIER3Q7Z3K6 550 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 FRMD5Q7Z6J6 570 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 SPATS2Q86XZ4 545 aaKnown RBP5.13□□□□□ -1.59
USP44-201ENST00000258499 TPCN2Q8NHX9 752 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 PPP1R1BQ9UD71 204 aaPredicted RBP5.13□□□□□ -1.59
USP44-201ENST00000258499 SPEF2Q9C093 1822 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 KIF1AQ12756 1690 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 LAMA4Q16363 1823 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 ANKRD62A6NC57 917 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 M0R2N6 131 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 ZBTB39O15060 712 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 FGFR4P22455 802 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 HNRNPH3P31942 346 aaKnown RBP5.13□□□□□ -1.59
USP44-201ENST00000258499 CETN2P41208 172 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 KCNJ1P48048 391 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 RHBDL3P58872 404 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 EDRF1Q3B7T1 1238 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 FAM102BQ5T8I3 360 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 HGSNATQ68CP4 663 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 ZNF365Q70YC5 407 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 OGFOD1Q8N543 542 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 TAB3Q8N5C8 712 aaPredicted RBP5.13□□□□□ -1.59
USP44-201ENST00000258499 MSL3Q8N5Y2 521 aaKnown RBP5.13□□□□□ -1.59
USP44-201ENST00000258499 CCDC197Q8NCU1 140 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 CAVIN3Q969G5 261 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 ZNF653Q96CK0 615 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 FAM212AQ96EL1 285 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 CYFIP2Q96F07 1278 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 THOC1Q96FV9 657 aaKnown RBP5.13□□□□□ -1.59
USP44-201ENST00000258499 PSMD1Q99460 953 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 COA1Q9GZY4 146 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 STMN4Q9H169 189 aaPredicted RBP5.13□□□□□ -1.59
USP44-201ENST00000258499 ISCUQ9H1K1 167 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.13□□□□□ -1.59
USP44-201ENST00000258499 ARHGEF10LQ9HCE6 1279 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 PDXKO00764 312 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 NDUFB10O96000 172 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 POTEJP0CG39 1038 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 SOX5P35711 763 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 GIT2Q14161 759 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 COG2Q14746 738 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 TMEM119Q4V9L6 283 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 MIGA2Q7L4E1 593 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 GDAP1Q8TB36 358 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 RFFLQ8WZ73 363 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 PURBQ96QR8 312 aaKnown RBP5.13□□□□□ -1.59
USP44-201ENST00000258499 AZI2Q9H6S1 392 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 SPATA31A5Q5VU36 1347 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 SPATA31A7Q8IWB4 1347 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 RASGRF2O14827 1237 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 PJA2O43164 708 aa5.13□□□□□ -1.59
USP44-201ENST00000258499 RPS6KA5O75582 802 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms