RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 MAPK13O15264 365 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 FYNP06241 537 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 TRIM23P36406 574 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 KCNJ6P48051 423 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 PLIN5Q00G26 463 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 ATP1A4Q13733 1029 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 ANKDD1AQ495B1 522 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 HDDC2Q7Z4H3 204 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 C11orf96Q7Z7L8 435 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 RASSF3Q86WH2 238 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 DDX42Q86XP3 938 aaKnown RBP eCLIP7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 GIPC3Q8TF64 312 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 KAT2BQ92831 832 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 DDX25Q9UHL0 483 aaKnown RBP7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 KIAA1210Q9ULL0 1709 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 CDHR2Q9BYE9 1310 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 A0A1B0GVL5 298 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 MAGEB16A2A368 324 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 PFDN6O15212 129 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 IDH3BO43837 385 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 PTCD1O75127 700 aaKnown RBP7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 GFPT2O94808 682 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 HOXB7P09629 217 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 PDE6AP16499 860 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 GUCY1A3Q02108 690 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 Q6ZUG5 572 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 DGLUCYQ7Z3D6 616 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 PJA1Q8NG27 643 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 CHMP1AQ9HD42 196 aaPredicted RBP7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 SNX5Q9Y5X3 404 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 N4BP1O75113 896 aaKnown RBP7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 TCP1P17987 556 aaKnown RBP7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 SMU1Q2TAY7 513 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 RNASE11Q8TAA1 199 aaKnown RBP7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 ATP6V1G3Q96LB4 118 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 NSMCE3Q96MG7 304 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 SYNDIG1Q9H7V2 258 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 COG4Q9H9E3 785 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 MOV10Q9HCE1 1003 aaKnown RBP7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 SLC8A2Q9UPR5 921 aa7.22□□□□□ -1.25
PDGFRA-201ENST00000257290 ITIH6Q6UXX5 1313 aa7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 USP27XA6NNY8 438 aa7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 SLC1A1P43005 524 aa7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 CENPAP49450 140 aa7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 PTK2Q05397 1052 aa7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 SPARCL1Q14515 664 aa7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 TDRD12Q587J7 1177 aaKnown RBP7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 NYAP1Q6ZVC0 841 aa7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 CDC26Q8NHZ8 85 aa7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 TBC1D5Q92609 795 aa7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 CNKSR1Q969H4 720 aa7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 TUBGCP3Q96CW5 907 aa7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 CDCA7Q9BWT1 371 aaPredicted RBP7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 INO80BQ9C086 356 aaPredicted RBP7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 TRIM45Q9H8W5 580 aaPredicted RBP7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 UTP11Q9Y3A2 253 aaKnown RBP7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 SLC16A2P36021 539 aa7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 SLC9A3P48764 834 aa7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 C21orf59P57076 290 aa7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 ADAM17P78536 824 aa7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 SPIDRQ14159 915 aa7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 SARM1Q6SZW1 724 aa7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 STXBP4Q6ZWJ1 553 aa7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 UNC45BQ8IWX7 931 aa7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 NGLY1Q96IV0 654 aa7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 L3MBTL1Q9Y468 752 aa7.21□□□□□ -1.25
PDGFRA-201ENST00000257290 LMTK3Q96Q04 1460 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 CD2BP2O95400 341 aaKnown RBP7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 SOX11P35716 441 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 RSBN1Q5VWQ0 802 aaPredicted RBP7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 CREB3L3Q68CJ9 461 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 SPERTQ8NA61 448 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 MINDY2Q8NBR6 621 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 RBBP8NLQ8NC74 664 aaPredicted RBP7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 COX4I2Q96KJ9 171 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 DEPDC7Q96QD5 511 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 ORAI2Q96SN7 254 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 KIFC3Q9BVG8 833 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 SERHL2Q9H4I8 314 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 SENP2Q9HC62 589 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 HPCAL4Q9UM19 191 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 CDK12Q9NYV4 1490 aaPredicted RBP7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 KIAA0232Q92628 1395 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 BCORL1Q5H9F3 1711 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 IGF2BP3O00425 579 aaKnown RBP eCLIP7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 SERPINB10P48595 397 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 GALK1P51570 392 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 ELF3P78545 371 aaPredicted RBP7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 MAP3K12Q12852 859 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 TRIM25Q14258 630 aaKnown RBP7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 MMEL1Q495T6 779 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 KSR2Q6VAB6 950 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 PRR23BQ6ZRT6 265 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 TOGARAM2Q6ZUX3 1019 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 ANKRD42Q8N9B4 389 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 CYTH2Q99418 400 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 TBK1Q9UHD2 729 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 SLC4A4Q9Y6R1 1079 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 DEPDC5O75140 1603 aa7.21□□□□□ -1.26
PDGFRA-201ENST00000257290 ZCCHC18P0CG32 403 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms