RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 UCHL3P15374 230 aa16.14■□□□□ 0.18
MBD4-201ENST00000249910 SYCP3Q8IZU3 236 aa16.14■□□□□ 0.18
MBD4-201ENST00000249910 ZBTB9Q96C00 473 aa16.14■□□□□ 0.18
MBD4-201ENST00000249910 PSMB7Q99436 277 aa16.14■□□□□ 0.18
MBD4-201ENST00000249910 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.14■□□□□ 0.18
MBD4-201ENST00000249910 PARD6BQ9BYG5 372 aa16.14■□□□□ 0.18
MBD4-201ENST00000249910 GBP3Q9H0R5 595 aa16.14■□□□□ 0.18
MBD4-201ENST00000249910 GANQ9H2C0 597 aa16.14■□□□□ 0.18
MBD4-201ENST00000249910 PCIF1Q9H4Z3 704 aa16.14■□□□□ 0.18
MBD4-201ENST00000249910 AGPAT3Q9NRZ7 376 aa16.14■□□□□ 0.18
MBD4-201ENST00000249910 AJAP1Q9UKB5 411 aaPredicted RBP16.14■□□□□ 0.18
MBD4-201ENST00000249910 ODF2LQ9ULJ1 636 aa16.14■□□□□ 0.18
MBD4-201ENST00000249910 K7ENM7 598 aa16.14■□□□□ 0.17
MBD4-201ENST00000249910 MOCS3O95396 460 aa16.14■□□□□ 0.17
MBD4-201ENST00000249910 LMNB1P20700 586 aa16.14■□□□□ 0.17
MBD4-201ENST00000249910 GUCY2CP25092 1073 aa16.14■□□□□ 0.17
MBD4-201ENST00000249910 MAGEA1P43355 309 aa16.14■□□□□ 0.17
MBD4-201ENST00000249910 SOX10P56693 466 aa16.14■□□□□ 0.17
MBD4-201ENST00000249910 SLC9C1Q4G0N8 1177 aa16.14■□□□□ 0.17
MBD4-201ENST00000249910 DPY19L2P1Q6NXN4 242 aa16.14■□□□□ 0.17
MBD4-201ENST00000249910 VSIG10LQ86VR7 867 aa16.14■□□□□ 0.17
MBD4-201ENST00000249910 FAM186BQ8IYM0 893 aa16.14■□□□□ 0.17
MBD4-201ENST00000249910 GOLGA1Q92805 767 aa16.14■□□□□ 0.17
MBD4-201ENST00000249910 TBC1D22BQ9NU19 505 aa16.14■□□□□ 0.17
MBD4-201ENST00000249910 TCEAL9Q9UHQ7 104 aa16.14■□□□□ 0.17
MBD4-201ENST00000249910 BACH1O14867 736 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 EIF3DO15371 548 aaKnown RBP eCLIP16.13■□□□□ 0.17
MBD4-201ENST00000249910 BUB1O43683 1085 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 USP2O75604 605 aaPredicted RBP16.13■□□□□ 0.17
MBD4-201ENST00000249910 TRIM49P0CI25 452 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 TRIM49CP0CI26 452 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 CATSPERGQ6ZRH7 1159 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 HS2ST1Q7LGA3 356 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 NIPA1Q7RTP0 329 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 NOA1Q8NC60 698 aaKnown RBP16.13■□□□□ 0.17
MBD4-201ENST00000249910 ZSWIM2Q8NEG5 633 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 BORCS6Q96GS4 357 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 A1CFQ9NQ94 594 aaKnown RBP16.13■□□□□ 0.17
MBD4-201ENST00000249910 GCNT4Q9P109 453 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 AFG3L2Q9Y4W6 797 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 POLR2AP24928 1970 aaKnown RBP16.13■□□□□ 0.17
MBD4-201ENST00000249910 A0A087X0T9 212 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 RHOXF2BP0C7M4 288 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 FAM228BP0C875 321 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 MUTP22033 750 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 FSTL1Q12841 308 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 VGLL4Q14135 290 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 TREML2Q5T2D2 321 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 KLHDC7AQ5VTJ3 777 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.13■□□□□ 0.17
MBD4-201ENST00000249910 RBM46Q8TBY0 533 aaKnown RBP16.13■□□□□ 0.17
MBD4-201ENST00000249910 CCDC43Q96MW1 224 aaKnown RBP16.13■□□□□ 0.17
MBD4-201ENST00000249910 SPAG5Q96R06 1193 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 RHOXF2Q9BQY4 288 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 KIFC3Q9BVG8 833 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 KCND2Q9NZV8 630 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 SAR1BQ9Y6B6 198 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 SSC5DA1L4H1 1573 aa16.13■□□□□ 0.17
MBD4-201ENST00000249910 SPDYE16A6NNV3 312 aaPredicted RBP16.12■□□□□ 0.17
MBD4-201ENST00000249910 ADM5C9JUS6 153 aa16.12■□□□□ 0.17
MBD4-201ENST00000249910 PSMC2P35998 433 aaKnown RBP16.12■□□□□ 0.17
MBD4-201ENST00000249910 KLHL30Q0D2K2 578 aa16.12■□□□□ 0.17
MBD4-201ENST00000249910 TRAPPC11Q7Z392 1133 aa16.12■□□□□ 0.17
MBD4-201ENST00000249910 EDEM3Q9BZQ6 932 aa16.12■□□□□ 0.17
MBD4-201ENST00000249910 MAP3K20Q9NYL2 800 aaKnown RBP16.12■□□□□ 0.17
MBD4-201ENST00000249910 TMOD4Q9NZQ9 345 aa16.12■□□□□ 0.17
MBD4-201ENST00000249910 LARSQ9P2J5 1176 aaKnown RBP16.12■□□□□ 0.17
MBD4-201ENST00000249910 DDX41Q9UJV9 622 aaKnown RBP16.12■□□□□ 0.17
MBD4-201ENST00000249910 SERPING1P05155 500 aa16.12■□□□□ 0.17
MBD4-201ENST00000249910 PEX3P56589 373 aa16.12■□□□□ 0.17
MBD4-201ENST00000249910 PTK2Q05397 1052 aa16.12■□□□□ 0.17
MBD4-201ENST00000249910 CBWD6Q4V339 395 aa16.12■□□□□ 0.17
MBD4-201ENST00000249910 XKR9Q5GH70 373 aa16.12■□□□□ 0.17
MBD4-201ENST00000249910 CBWD3Q5JTY5 395 aa16.12■□□□□ 0.17
MBD4-201ENST00000249910 CBWD5Q5RIA9 395 aa16.12■□□□□ 0.17
MBD4-201ENST00000249910 GPR161Q8N6U8 529 aaKnown RBP16.12■□□□□ 0.17
MBD4-201ENST00000249910 CEP112Q8N8E3 955 aa16.12■□□□□ 0.17
MBD4-201ENST00000249910 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.12■□□□□ 0.17
MBD4-201ENST00000249910 TEX13BQ9BXU2 312 aa16.12■□□□□ 0.17
MBD4-201ENST00000249910 PACSIN1Q9BY11 444 aa16.12■□□□□ 0.17
MBD4-201ENST00000249910 METTL14Q9HCE5 456 aaKnown RBP16.12■□□□□ 0.17
MBD4-201ENST00000249910 CYP39A1Q9NYL5 469 aa16.12■□□□□ 0.17
MBD4-201ENST00000249910 SEL1LQ9UBV2 794 aa16.12■□□□□ 0.17
MBD4-201ENST00000249910 ADAMTS5Q9UNA0 930 aa16.12■□□□□ 0.17
MBD4-201ENST00000249910 C19orf81C9J6K1 198 aa16.11■□□□□ 0.17
MBD4-201ENST00000249910 EXOC3O60645 756 aa16.11■□□□□ 0.17
MBD4-201ENST00000249910 LRRN2O75325 713 aa16.11■□□□□ 0.17
MBD4-201ENST00000249910 LCA5LO95447 670 aa16.11■□□□□ 0.17
MBD4-201ENST00000249910 CXCR5P32302 372 aa16.11■□□□□ 0.17
MBD4-201ENST00000249910 NAP1L1P55209 391 aaKnown RBP16.11■□□□□ 0.17
MBD4-201ENST00000249910 FAM102BQ5T8I3 360 aa16.11■□□□□ 0.17
MBD4-201ENST00000249910 ZNF662Q6ZS27 426 aa16.11■□□□□ 0.17
MBD4-201ENST00000249910 ANO5Q75V66 913 aa16.11■□□□□ 0.17
MBD4-201ENST00000249910 NLRX1Q86UT6 975 aa16.11■□□□□ 0.17
MBD4-201ENST00000249910 NEK9Q8TD19 979 aa16.11■□□□□ 0.17
MBD4-201ENST00000249910 RABGGTAQ92696 567 aa16.11■□□□□ 0.17
MBD4-201ENST00000249910 MMS19Q96T76 1030 aa16.11■□□□□ 0.17
MBD4-201ENST00000249910 CBWD1Q9BRT8 395 aa16.11■□□□□ 0.17
MBD4-201ENST00000249910 FHDC1Q9C0D6 1143 aaPredicted RBP16.11■□□□□ 0.17
MBD4-201ENST00000249910 MYH10P35580 1976 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms