RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ITGB5P18084 799 aa21.35■■□□□ 1.01
CDC42EP1-201ENST00000249014 MUTP22033 750 aa21.35■■□□□ 1.01
CDC42EP1-201ENST00000249014 SETQ01105 290 aaPredicted RBP21.35■■□□□ 1.01
CDC42EP1-201ENST00000249014 C8orf74Q6P047 294 aa21.35■■□□□ 1.01
CDC42EP1-201ENST00000249014 ALKBH5Q6P6C2 394 aaKnown RBP21.35■■□□□ 1.01
CDC42EP1-201ENST00000249014 RTKN2Q8IZC4 609 aa21.35■■□□□ 1.01
CDC42EP1-201ENST00000249014 INPP4AQ96PE3 977 aaPredicted RBP21.35■■□□□ 1.01
CDC42EP1-201ENST00000249014 TEKT3Q9BXF9 490 aa21.35■■□□□ 1.01
CDC42EP1-201ENST00000249014 COL20A1Q9P218 1284 aa21.35■■□□□ 1.01
CDC42EP1-201ENST00000249014 PGAP2Q9UHJ9 254 aa21.35■■□□□ 1.01
CDC42EP1-201ENST00000249014 ZNF536O15090 1300 aa21.35■■□□□ 1.01
CDC42EP1-201ENST00000249014 DDX39AO00148 427 aaKnown RBP21.34■■□□□ 1.01
CDC42EP1-201ENST00000249014 INPP5BP32019 993 aa21.34■■□□□ 1.01
CDC42EP1-201ENST00000249014 ODR4Q5SWX8 454 aa21.34■■□□□ 1.01
CDC42EP1-201ENST00000249014 FKBP1CQ5VVH2 108 aa21.34■■□□□ 1.01
CDC42EP1-201ENST00000249014 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.34■■□□□ 1.01
CDC42EP1-201ENST00000249014 SND1Q7KZF4 910 aaKnown RBP eCLIP21.34■■□□□ 1.01
CDC42EP1-201ENST00000249014 MXRA8Q9BRK3 442 aa21.34■■□□□ 1.01
CDC42EP1-201ENST00000249014 GOLPH3Q9H4A6 298 aa21.34■■□□□ 1.01
CDC42EP1-201ENST00000249014 FAM204AQ9H8W3 233 aa21.34■■□□□ 1.01
CDC42EP1-201ENST00000249014 SEL1LQ9UBV2 794 aa21.34■■□□□ 1.01
CDC42EP1-201ENST00000249014 SCAF8Q9UPN6 1271 aaKnown RBP21.34■■□□□ 1.01
CDC42EP1-201ENST00000249014 PTGER2P43116 358 aa21.34■■□□□ 1.01
CDC42EP1-201ENST00000249014 AGPAT3Q9NRZ7 376 aa21.34■■□□□ 1.01
CDC42EP1-201ENST00000249014 ODF2LQ9ULJ1 636 aa21.34■■□□□ 1.01
CDC42EP1-201ENST00000249014 HSD17B4P51659 736 aa21.33■■□□□ 1.01
CDC42EP1-201ENST00000249014 EN1Q05925 392 aaPredicted RBP21.33■■□□□ 1.01
CDC42EP1-201ENST00000249014 DAW1Q8N136 415 aa21.33■■□□□ 1.01
CDC42EP1-201ENST00000249014 MKNK1Q9BUB5 465 aa21.33■■□□□ 1.01
CDC42EP1-201ENST00000249014 DEFB129Q9H1M3 183 aa21.33■■□□□ 1.01
CDC42EP1-201ENST00000249014 DMAC2Q9NW81 257 aa21.33■■□□□ 1.01
CDC42EP1-201ENST00000249014 KCND2Q9NZV8 630 aa21.33■■□□□ 1.01
CDC42EP1-201ENST00000249014 PKD2L1Q9P0L9 805 aa21.33■■□□□ 1.01
CDC42EP1-201ENST00000249014 UBE4BO95155 1302 aa21.33■■□□□ 1
CDC42EP1-201ENST00000249014 FMO5P49326 533 aa21.33■■□□□ 1
CDC42EP1-201ENST00000249014 CYP2J2P51589 502 aa21.33■■□□□ 1
CDC42EP1-201ENST00000249014 MAPK7Q13164 816 aa21.33■■□□□ 1
CDC42EP1-201ENST00000249014 CBWD6Q4V339 395 aa21.33■■□□□ 1
CDC42EP1-201ENST00000249014 CBWD3Q5JTY5 395 aa21.33■■□□□ 1
CDC42EP1-201ENST00000249014 CBWD5Q5RIA9 395 aa21.33■■□□□ 1
CDC42EP1-201ENST00000249014 FAM83AQ86UY5 434 aa21.33■■□□□ 1
CDC42EP1-201ENST00000249014 IL31RAQ8NI17 732 aa21.33■■□□□ 1
CDC42EP1-201ENST00000249014 STK32BQ9NY57 414 aa21.33■■□□□ 1
CDC42EP1-201ENST00000249014 CCPG1Q9ULG6 757 aa21.33■■□□□ 1
CDC42EP1-201ENST00000249014 DDX3XO00571 662 aaKnown RBP eCLIP21.32■■□□□ 12e-9■■■■□ 21.8
CDC42EP1-201ENST00000249014 NFIBO00712 420 aa21.32■■□□□ 1
CDC42EP1-201ENST00000249014 HIP1RO75146 1068 aa21.32■■□□□ 1
CDC42EP1-201ENST00000249014 FLOT1O75955 427 aa21.32■■□□□ 1
CDC42EP1-201ENST00000249014 GFPT2O94808 682 aa21.32■■□□□ 1
CDC42EP1-201ENST00000249014 ICAM1P05362 532 aa21.32■■□□□ 1
CDC42EP1-201ENST00000249014 GLI1P08151 1106 aa21.32■■□□□ 1
CDC42EP1-201ENST00000249014 GUCY2CP25092 1073 aa21.32■■□□□ 1
CDC42EP1-201ENST00000249014 RNASE9P60153 205 aaKnown RBP21.32■■□□□ 1
CDC42EP1-201ENST00000249014 GRIPAP1Q4V328 841 aa21.32■■□□□ 1
CDC42EP1-201ENST00000249014 GLE1Q53GS7 698 aaKnown RBP21.32■■□□□ 1
CDC42EP1-201ENST00000249014 LRRC57Q8N9N7 239 aa21.32■■□□□ 1
CDC42EP1-201ENST00000249014 OLIG1Q8TAK6 271 aa21.32■■□□□ 1
CDC42EP1-201ENST00000249014 PPP1R12BO60237 982 aaPredicted RBP21.31■■□□□ 1
CDC42EP1-201ENST00000249014 KCNA3P22001 575 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 TNFRSF8P28908 595 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 NBPF9Q3BBW0 867 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 HS2ST1Q7LGA3 356 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 RIT2Q99578 217 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 STRA6Q9BX79 667 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 KCNH7Q9NS40 1196 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 CALCOCO1Q9P1Z2 691 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 ARHGEF35A5YM69 484 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 ZSCAN5CA6NGD5 496 aaPredicted RBP21.31■■□□□ 1
CDC42EP1-201ENST00000249014 PPP1R37O75864 691 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 TRIM49P0CI25 452 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 TRIM49CP0CI26 452 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 CAPN2P17655 700 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 RXRBP28702 533 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 NOP2P46087 812 aaKnown RBP21.31■■□□□ 1
CDC42EP1-201ENST00000249014 EPHB4P54760 987 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 TAF3Q5VWG9 929 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 MTMR14Q8NCE2 650 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 CLEC4DQ8WXI8 215 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 CAMKK2Q96RR4 588 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 ZNF341Q9BYN7 854 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 PLEKHA4Q9H4M7 779 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 FER1L6Q2WGJ9 1857 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 RPTORQ8N122 1335 aa21.31■■□□□ 1
CDC42EP1-201ENST00000249014 GOLGA6BA6NDN3 693 aa21.3■■□□□ 1
CDC42EP1-201ENST00000249014 EVI5O60447 810 aa21.3■■□□□ 1
CDC42EP1-201ENST00000249014 ASNSP08243 561 aa21.3■■□□□ 1
CDC42EP1-201ENST00000249014 ANXA13P27216 316 aa21.3■■□□□ 1
CDC42EP1-201ENST00000249014 MAP3K10Q02779 954 aa21.3■■□□□ 1
CDC42EP1-201ENST00000249014 ZSCAN26Q16670 478 aa21.3■■□□□ 1
CDC42EP1-201ENST00000249014 PTPROQ16827 1216 aa21.3■■□□□ 1
CDC42EP1-201ENST00000249014 FRMD4BQ9Y2L6 1034 aa21.3■■□□□ 1
CDC42EP1-201ENST00000249014 F8VZ95 297 aa21.3■■□□□ 1
CDC42EP1-201ENST00000249014 WNT10BO00744 389 aa21.3■■□□□ 1
CDC42EP1-201ENST00000249014 DHX15O43143 795 aaKnown RBP21.3■■□□□ 1
CDC42EP1-201ENST00000249014 FERP16591 822 aa21.3■■□□□ 1
CDC42EP1-201ENST00000249014 STAT1P42224 750 aa21.3■■□□□ 1
CDC42EP1-201ENST00000249014 PLS1Q14651 629 aa21.3■■□□□ 1
CDC42EP1-201ENST00000249014 RPS6KA1Q15418 735 aa21.3■■□□□ 1
CDC42EP1-201ENST00000249014 STXBP4Q6ZWJ1 553 aa21.3■■□□□ 1
CDC42EP1-201ENST00000249014 MAEAQ7L5Y9 396 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms