RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 A0A1W2PQJ5 194 aa25.71■■□□□ 1.71
SYNGR3-201ENST00000248121 WDR64B1ANS9 1081 aa25.71■■□□□ 1.71
SYNGR3-201ENST00000248121 PDXKO00764 312 aa25.71■■□□□ 1.71
SYNGR3-201ENST00000248121 CTIFO43310 598 aaKnown RBP25.71■■□□□ 1.71
SYNGR3-201ENST00000248121 ARIH2O95376 493 aa25.71■■□□□ 1.71
SYNGR3-201ENST00000248121 GNA14O95837 355 aa25.71■■□□□ 1.71
SYNGR3-201ENST00000248121 UBA1P22314 1058 aaKnown RBP25.71■■□□□ 1.71
SYNGR3-201ENST00000248121 NR2F2P24468 414 aa25.71■■□□□ 1.71
SYNGR3-201ENST00000248121 GUCY2CP25092 1073 aa25.71■■□□□ 1.71
SYNGR3-201ENST00000248121 ICAM3P32942 547 aa25.71■■□□□ 1.71
SYNGR3-201ENST00000248121 ZBED6P86452 979 aa25.71■■□□□ 1.71
SYNGR3-201ENST00000248121 TMEM63BQ5T3F8 832 aa25.71■■□□□ 1.71
SYNGR3-201ENST00000248121 CYFIP1Q7L576 1253 aa25.71■■□□□ 1.71
SYNGR3-201ENST00000248121 FBXO16Q8IX29 292 aaPredicted RBP25.71■■□□□ 1.71
SYNGR3-201ENST00000248121 DAW1Q8N136 415 aa25.71■■□□□ 1.71
SYNGR3-201ENST00000248121 ACRBPQ8NEB7 543 aa25.71■■□□□ 1.71
SYNGR3-201ENST00000248121 PCMTD1Q96MG8 357 aaPredicted RBP25.71■■□□□ 1.71
SYNGR3-201ENST00000248121 JPH1Q9HDC5 661 aaPredicted RBP25.71■■□□□ 1.71
SYNGR3-201ENST00000248121 DNAI1Q9UI46 699 aa25.71■■□□□ 1.71
SYNGR3-201ENST00000248121 MYH9P35579 1960 aaKnown RBP25.7■■□□□ 1.71
SYNGR3-201ENST00000248121 QARSP47897 775 aaKnown RBP25.7■■□□□ 1.71
SYNGR3-201ENST00000248121 CCNA1P78396 465 aa25.7■■□□□ 1.71
SYNGR3-201ENST00000248121 IKZF4Q9H2S9 585 aa25.7■■□□□ 1.71
SYNGR3-201ENST00000248121 ODF2LQ9ULJ1 636 aa25.7■■□□□ 1.71
SYNGR3-201ENST00000248121 NFASCO94856 1347 aa25.7■■□□□ 1.71
SYNGR3-201ENST00000248121 ZMYM2Q9UBW7 1377 aa25.7■■□□□ 1.71
SYNGR3-201ENST00000248121 ARHGEF35A5YM69 484 aa25.7■■□□□ 1.7
SYNGR3-201ENST00000248121 MANSC4A6NHS7 340 aaPredicted RBP25.7■■□□□ 1.7
SYNGR3-201ENST00000248121 LYPLA2O95372 231 aa25.7■■□□□ 1.7
SYNGR3-201ENST00000248121 KCNMA1Q12791 1236 aa25.7■■□□□ 1.7
SYNGR3-201ENST00000248121 GRM1Q13255 1194 aa25.7■■□□□ 1.7
SYNGR3-201ENST00000248121 FAM110CQ1W6H9 321 aa25.7■■□□□ 1.7
SYNGR3-201ENST00000248121 ZC2HC1CQ53FD0 456 aaPredicted RBP25.7■■□□□ 1.7
SYNGR3-201ENST00000248121 ZNF746Q6NUN9 644 aaPredicted RBP25.7■■□□□ 1.7
SYNGR3-201ENST00000248121 PHLPP2Q6ZVD8 1323 aa25.7■■□□□ 1.7
SYNGR3-201ENST00000248121 GPR142Q7Z601 462 aa25.7■■□□□ 1.7
SYNGR3-201ENST00000248121 SMC1BQ8NDV3 1235 aa25.7■■□□□ 1.7
SYNGR3-201ENST00000248121 TYW1Q9NV66 732 aaKnown RBP25.7■■□□□ 1.7
SYNGR3-201ENST00000248121 SLC9A2Q9UBY0 812 aa25.7■■□□□ 1.7
SYNGR3-201ENST00000248121 CETN3O15182 167 aa25.69■■□□□ 1.7
SYNGR3-201ENST00000248121 EIF3DO15371 548 aaKnown RBP eCLIP25.69■■□□□ 1.7
SYNGR3-201ENST00000248121 TGFB1I1O43294 461 aa25.69■■□□□ 1.7
SYNGR3-201ENST00000248121 JAK3P52333 1124 aa25.69■■□□□ 1.7
SYNGR3-201ENST00000248121 PADI6Q6TGC4 694 aa25.69■■□□□ 1.7
SYNGR3-201ENST00000248121 CDHR1Q96JP9 859 aa25.69■■□□□ 1.7
SYNGR3-201ENST00000248121 FAM207AQ9NSI2 230 aaPredicted RBP25.69■■□□□ 1.7
SYNGR3-201ENST00000248121 PCNTO95613 3336 aa25.68■■□□□ 1.7
SYNGR3-201ENST00000248121 RARRES1P49788 294 aa25.68■■□□□ 1.7
SYNGR3-201ENST00000248121 TAF1CQ15572 869 aaPredicted RBP25.68■■□□□ 1.7
SYNGR3-201ENST00000248121 LY6KQ17RY6 165 aa25.68■■□□□ 1.7
SYNGR3-201ENST00000248121 DBR1Q9UK59 544 aaKnown RBP25.68■■□□□ 1.7
SYNGR3-201ENST00000248121 HIP1RO75146 1068 aa25.68■■□□□ 1.7
SYNGR3-201ENST00000248121 ACTR2P61160 394 aa25.68■■□□□ 1.7
SYNGR3-201ENST00000248121 ZNF792Q3KQV3 632 aa25.68■■□□□ 1.7
SYNGR3-201ENST00000248121 UTP14CQ5TAP6 766 aaKnown RBP25.68■■□□□ 1.7
SYNGR3-201ENST00000248121 ZNF720Q7Z2F6 126 aa25.68■■□□□ 1.7
SYNGR3-201ENST00000248121 IFNL1Q8IU54 200 aa25.68■■□□□ 1.7
SYNGR3-201ENST00000248121 CCDC60Q8IWA6 550 aaPredicted RBP25.68■■□□□ 1.7
SYNGR3-201ENST00000248121 WDR24Q96S15 920 aa25.68■■□□□ 1.7
SYNGR3-201ENST00000248121 SENP7Q9BQF6 1050 aa25.68■■□□□ 1.7
SYNGR3-201ENST00000248121 SEL1LQ9UBV2 794 aa25.68■■□□□ 1.7
SYNGR3-201ENST00000248121 REXO2Q9Y3B8 237 aaKnown RBP25.68■■□□□ 1.7
SYNGR3-201ENST00000248121 CALUO43852 315 aaPredicted RBP25.67■■□□□ 1.7
SYNGR3-201ENST00000248121 ZNF862O60290 1169 aa25.67■■□□□ 1.7
SYNGR3-201ENST00000248121 SFNP31947 248 aa25.67■■□□□ 1.7
SYNGR3-201ENST00000248121 PLA2G4FQ68DD2 849 aa25.67■■□□□ 1.7
SYNGR3-201ENST00000248121 KSR1Q8IVT5 923 aa25.67■■□□□ 1.7
SYNGR3-201ENST00000248121 IRX2Q9BZI1 471 aaPredicted RBP25.67■■□□□ 1.7
SYNGR3-201ENST00000248121 MMRN2Q9H8L6 949 aa25.67■■□□□ 1.7
SYNGR3-201ENST00000248121 L2HGDHQ9H9P8 463 aa25.67■■□□□ 1.7
SYNGR3-201ENST00000248121 LZTFL1Q9NQ48 299 aa25.67■■□□□ 1.7
SYNGR3-201ENST00000248121 GABBR1Q9UBS5 961 aa25.67■■□□□ 1.7
SYNGR3-201ENST00000248121 TCEAL9Q9UHQ7 104 aa25.67■■□□□ 1.7
SYNGR3-201ENST00000248121 PCDHA10Q9Y5I2 948 aa25.67■■□□□ 1.7
SYNGR3-201ENST00000248121 ZSWIM8A7E2V4 1837 aa25.67■■□□□ 1.7
SYNGR3-201ENST00000248121 PDGFCQ9NRA1 345 aa25.67■■□□□ 1.7
SYNGR3-201ENST00000248121 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.67■■□□□ 1.7
SYNGR3-201ENST00000248121 EPN1Q9Y6I3 576 aaPredicted RBP25.67■■□□□ 1.7
SYNGR3-201ENST00000248121 NDUFA10O95299 355 aa25.66■■□□□ 1.7
SYNGR3-201ENST00000248121 ABL1P00519 1130 aa25.66■■□□□ 1.7
SYNGR3-201ENST00000248121 NR3C1P04150 777 aa25.66■■□□□ 1.7
SYNGR3-201ENST00000248121 ODR4Q5SWX8 454 aa25.66■■□□□ 1.7
SYNGR3-201ENST00000248121 C4orf19Q8IY42 314 aa25.66■■□□□ 1.7
SYNGR3-201ENST00000248121 IQCDQ96DY2 449 aa25.66■■□□□ 1.7
SYNGR3-201ENST00000248121 AKAP3O75969 853 aa25.65■■□□□ 1.7
SYNGR3-201ENST00000248121 FARP2O94887 1054 aaPredicted RBP25.65■■□□□ 1.7
SYNGR3-201ENST00000248121 YWHABP31946 246 aaKnown RBP25.65■■□□□ 1.7
SYNGR3-201ENST00000248121 ABHD15Q6UXT9 468 aa25.65■■□□□ 1.7
SYNGR3-201ENST00000248121 ARMCX2Q7L311 632 aa25.65■■□□□ 1.7
SYNGR3-201ENST00000248121 FAM178BQ8IXR5 827 aa25.65■■□□□ 1.7
SYNGR3-201ENST00000248121 MORC4Q8TE76 937 aa25.65■■□□□ 1.7
SYNGR3-201ENST00000248121 STRA6Q9BX79 667 aa25.65■■□□□ 1.7
SYNGR3-201ENST00000248121 SYNGAP1Q96PV0 1343 aa25.65■■□□□ 1.7
SYNGR3-201ENST00000248121 CLIC2O15247 247 aa25.65■■□□□ 1.7
SYNGR3-201ENST00000248121 CASP4P49662 377 aa25.65■■□□□ 1.7
SYNGR3-201ENST00000248121 GNG11P61952 73 aa25.65■■□□□ 1.7
SYNGR3-201ENST00000248121 PSMC5P62195 406 aa25.65■■□□□ 1.7
SYNGR3-201ENST00000248121 CYP4F22Q6NT55 531 aa25.65■■□□□ 1.7
SYNGR3-201ENST00000248121 SWSAP1Q6NVH7 229 aa25.65■■□□□ 1.7
SYNGR3-201ENST00000248121 TMEM88BA6NKF7 163 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms