RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 ARHGAP20Q9P2F6 1191 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 ASIC3Q9UHC3 531 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 GGT7Q9UJ14 662 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 REXO2Q9Y3B8 237 aaKnown RBP12.49□□□□□ -0.41
SOX9-201ENST00000245479 KCPQ6ZWJ8 1503 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 BAZ2AQ9UIF9 1905 aaKnown RBP12.49□□□□□ -0.41
SOX9-201ENST00000245479 MED24O75448 989 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 PDHA1P08559 390 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 KRT5P13647 590 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 CASP5P51878 434 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 ZNF543Q08ER8 600 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 DLGAP5Q15398 846 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 TRADDQ15628 312 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.49□□□□□ -0.41
SOX9-201ENST00000245479 C16orf86Q6ZW13 317 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 FAM178BQ8IXR5 827 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 SYCE1Q8N0S2 351 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 SPIRE2Q8WWL2 714 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 PPP1R16BQ96T49 567 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 AMNQ9BXJ7 453 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 HDAC9Q9UKV0 1011 aa12.49□□□□□ -0.41
SOX9-201ENST00000245479 ARHGEF35A5YM69 484 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 TISP43B9A030 160 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 CETN1Q12798 172 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 SBK1Q52WX2 424 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 WDR59Q6PJI9 974 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 TNFRSF25Q93038 417 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 ZKSCAN4Q969J2 545 aaPredicted RBP12.48□□□□□ -0.41
SOX9-201ENST00000245479 CHMP6Q96FZ7 201 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 PRMT6Q96LA8 375 aaPredicted RBP12.48□□□□□ -0.41
SOX9-201ENST00000245479 FMO2Q99518 471 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 LZTS2Q9BRK4 669 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 RABGAP1Q9Y3P9 1069 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 RHOBTB3O94955 611 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 CALCAP01258 141 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 EPB41P11171 864 aaKnown RBP12.48□□□□□ -0.41
SOX9-201ENST00000245479 COG2Q14746 738 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 EPC2Q52LR7 807 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 NUGGCQ68CJ6 796 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 SH3RF1Q7Z6J0 888 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 PPM1KQ8N3J5 372 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 DYDC2Q96IM9 177 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 PURBQ96QR8 312 aaKnown RBP12.48□□□□□ -0.41
SOX9-201ENST00000245479 TCHPQ9BT92 498 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 ACP6Q9NPH0 428 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 BATF3Q9NR55 127 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 ATF5Q9Y2D1 282 aaPredicted RBP12.48□□□□□ -0.41
SOX9-201ENST00000245479 ABCB11O95342 1321 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 GPR75-ASB3A0A0A6YYF3 556 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 H0Y3Z8 333 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 ECE2O60344 883 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 H2AFZP0C0S5 128 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 PCP11498 1178 aaKnown RBP12.48□□□□□ -0.41
SOX9-201ENST00000245479 BMP3P12645 472 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 KLRC1P26715 233 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 UNC13DQ70J99 1090 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 H2AFVQ71UI9 128 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 VPS52Q8N1B4 723 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 PNMA5Q96PV4 448 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 TAF1DQ9H5J8 278 aaPredicted RBP12.48□□□□□ -0.41
SOX9-201ENST00000245479 FAM114A2Q9NRY5 505 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 GCNT4Q9P109 453 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 CTTNBP2NLQ9P2B4 639 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 GINS2Q9Y248 185 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 ATP6V0A2Q9Y487 856 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 LRRC37A3O60309 1634 aa12.48□□□□□ -0.41
SOX9-201ENST00000245479 SPOPO43791 374 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 EVI5O60447 810 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 NDUFB10O96000 172 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 CUL1Q13616 776 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 TRIP13Q15645 432 aaPredicted RBP12.47□□□□□ -0.41
SOX9-201ENST00000245479 ASPRV1Q53RT3 343 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 FAM182AQ5T1J6 154 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 P3H4Q92791 437 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 MIEF2Q96C03 454 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 FAM118BQ9BPY3 351 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 TMEM39BQ9GZU3 492 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 BLOC1S4Q9NUP1 217 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 KBTBD4Q9NVX7 518 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 USTQ9Y2C2 406 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 DAAM1Q9Y4D1 1078 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 A0A087X0T9 212 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 KLRC4O43908 158 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 FAM228BP0C875 321 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 RHBDL3P58872 404 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 MMGT1Q8N4V1 131 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 MMTAG2Q9BU76 263 aaKnown RBP12.47□□□□□ -0.41
SOX9-201ENST00000245479 KIFC3Q9BVG8 833 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 KIF9Q9HAQ2 790 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 NOD2Q9HC29 1040 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 FBXL5Q9UKA1 691 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 A0A1W2PQC6 194 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 SRGNP10124 158 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 RASSF2P50749 326 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 SOX10P56693 466 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 FAM102BQ5T8I3 360 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 NT5DC1Q5TFE4 455 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 GSTA5Q7RTV2 222 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 GLYCTKQ8IVS8 523 aa12.47□□□□□ -0.41
SOX9-201ENST00000245479 NEK9Q8TD19 979 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms