RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 PQBP1O60828 265 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 PHKA2P46019 1235 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 NFX1Q12986 1120 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 MXD4Q14582 209 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 MTFR1Q15390 333 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 RNF214Q8ND24 703 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 U2AF1L4Q8WU68 220 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 ADPGKQ9BRR6 497 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 KIAA1468Q9P260 1216 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 PPME1Q9Y570 386 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 K7ERI5 159 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 GJA9P57773 515 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 FMR1NBQ8N0W7 255 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 SYT2Q8N9I0 419 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 GSDMAQ96QA5 445 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 GCOM2Q9BZD3 368 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 SLC39A2Q9NP94 309 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 PCDHA5Q9Y5H7 936 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 NRCAMQ92823 1304 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 A0A0U1RQG5 324 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 BICDL2A1A5D9 508 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 HIP1RO75146 1068 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 LIG4P49917 911 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 SEMA3FQ13275 785 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 NELFCDQ8IXH7 590 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 CRYGNQ8WXF5 182 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 HSD17B14Q9BPX1 270 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 DBR1Q9UK59 544 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 ASAP2O43150 1006 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 RPLP2P05387 115 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 ZSCAN20P17040 1043 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 CYP11B2P19099 503 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 RPL13P26373 211 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 ITGA7Q13683 1181 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 LRRC41Q15345 812 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 HACE1Q8IYU2 909 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 ZNF668Q96K58 619 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 OTOFQ9HC10 1997 aa12.29□□□□□ -0.44
TNFAIP3-201ENST00000237289 DHX15O43143 795 aaKnown RBP12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 CTSHP09668 335 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 ACLYP53396 1101 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 PLCB4Q15147 1175 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 IL17AQ16552 155 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 NBPF20Q3BBV1 942 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 NFRKBQ6P4R8 1299 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 CATSPER4Q7RTX7 472 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 MYOCDQ8IZQ8 938 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 MCOLN1Q9GZU1 580 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 BCAS3Q9H6U6 928 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 SYNRGQ9UMZ2 1314 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 A6NJR5 290 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 SMIM10L2AP0DMW4 78 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 SMIM10L2BP0DMW5 78 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 PRKCSHP14314 528 aaPredicted RBP12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 PSMC6P62333 389 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 CCDC40Q4G0X9 1142 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 FILIP1LQ4L180 1135 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 UNC13DQ70J99 1090 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 USP37Q86T82 979 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 RNF149Q8NC42 400 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 C2orf40Q9H1Z8 148 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 ODF2LQ9ULJ1 636 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 RBM47A0AV96 593 aaKnown RBP12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 GOLGA6L3A6NEY3 463 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 THPOP40225 353 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 RARRES1P49788 294 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 BFSP2Q13515 415 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 CUL4BQ13620 913 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 PTGISQ16647 500 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 TAF2Q6P1X5 1199 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 GPT2Q8TD30 523 aa12.28□□□□□ -0.44
TNFAIP3-201ENST00000237289 CALUO43852 315 aaPredicted RBP12.27□□□□□ -0.44
TNFAIP3-201ENST00000237289 TMEM62Q0P6H9 643 aa12.27□□□□□ -0.44
TNFAIP3-201ENST00000237289 MAPK6Q16659 721 aa12.27□□□□□ -0.44
TNFAIP3-201ENST00000237289 GLIPR1L2Q4G1C9 344 aa12.27□□□□□ -0.44
TNFAIP3-201ENST00000237289 RINT1Q6NUQ1 792 aa12.27□□□□□ -0.44
TNFAIP3-201ENST00000237289 TRAPPC12Q8WVT3 735 aa12.27□□□□□ -0.44
TNFAIP3-201ENST00000237289 DPF3Q92784 378 aa12.27□□□□□ -0.44
TNFAIP3-201ENST00000237289 FGD4Q96M96 766 aa12.27□□□□□ -0.44
TNFAIP3-201ENST00000237289 HDAC6Q9UBN7 1215 aa12.27□□□□□ -0.44
TNFAIP3-201ENST00000237289 SEL1LQ9UBV2 794 aa12.27□□□□□ -0.44
TNFAIP3-201ENST00000237289 ASTN1O14525 1302 aa12.27□□□□□ -0.44
TNFAIP3-201ENST00000237289 PVALEFA0A1B0GWK0 134 aa12.27□□□□□ -0.44
TNFAIP3-201ENST00000237289 CLCN3P51790 818 aa12.27□□□□□ -0.44
TNFAIP3-201ENST00000237289 PSMD2Q13200 908 aa12.27□□□□□ -0.44
TNFAIP3-201ENST00000237289 FAM212AQ96EL1 285 aa12.27□□□□□ -0.44
TNFAIP3-201ENST00000237289 MORC2Q9Y6X9 1032 aaPredicted RBP12.27□□□□□ -0.44
TNFAIP3-201ENST00000237289 PHLPP2Q6ZVD8 1323 aa12.27□□□□□ -0.44
TNFAIP3-201ENST00000237289 MROH7Q68CQ1 1323 aa12.27□□□□□ -0.45
TNFAIP3-201ENST00000237289 EMSYQ7Z589 1322 aa12.27□□□□□ -0.45
TNFAIP3-201ENST00000237289 GJB1P08034 283 aa12.27□□□□□ -0.45
TNFAIP3-201ENST00000237289 ZSCAN23Q3MJ62 389 aa12.27□□□□□ -0.45
TNFAIP3-201ENST00000237289 MLKLQ8NB16 471 aa12.27□□□□□ -0.45
TNFAIP3-201ENST00000237289 PNMA5Q96PV4 448 aa12.27□□□□□ -0.45
TNFAIP3-201ENST00000237289 TSEN34Q9BSV6 310 aaKnown RBP12.27□□□□□ -0.45
TNFAIP3-201ENST00000237289 TMEM150BA6NC51 233 aa12.27□□□□□ -0.45
TNFAIP3-201ENST00000237289 HNRNPDLO14979 420 aaKnown RBP12.27□□□□□ -0.45
TNFAIP3-201ENST00000237289 SGPL1O95470 568 aa12.27□□□□□ -0.45
TNFAIP3-201ENST00000237289 CAVIN2O95810 425 aa12.27□□□□□ -0.45
TNFAIP3-201ENST00000237289 KRT13P13646 458 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms