RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 DEAF1O75398 565 aaPredicted RBP13.79□□□□□ -0.2
VAMP4-201ENST00000236192 DAB1O75553 588 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 BAG3O95817 575 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 FAM153BP0C7A2 387 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 TRIP10Q15642 601 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 FAM153CQ494X1 144 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 TSHZ1Q6ZSZ6 1077 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 SPATA7Q9P0W8 599 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 FAM153AQ9UHL3 310 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 GDAQ9Y2T3 454 aa13.79□□□□□ -0.2
VAMP4-201ENST00000236192 POLGP54098 1239 aaPredicted RBP13.78□□□□□ -0.2
VAMP4-201ENST00000236192 SGO2Q562F6 1265 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 ERMARDQ5T6L9 678 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 DDX28Q9NUL7 540 aaKnown RBP13.78□□□□□ -0.2
VAMP4-201ENST00000236192 YTHDC2Q9H6S0 1430 aaKnown RBP13.78□□□□□ -0.2
VAMP4-201ENST00000236192 SYNGAP1Q96PV0 1343 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 TRIM49BA6NDI0 452 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 AGPSO00116 658 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 WASLO00401 505 aaPredicted RBP13.78□□□□□ -0.2
VAMP4-201ENST00000236192 TSPY3P0CV98 308 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 TSPY8P0CW00 308 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 PRCPP42785 496 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 TSPY1Q01534 308 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 ZC3H12AQ5D1E8 599 aaKnown RBP13.78□□□□□ -0.2
VAMP4-201ENST00000236192 KIAA1755Q5JYT7 1200 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 GJC2Q5T442 439 aaPredicted RBP13.78□□□□□ -0.2
VAMP4-201ENST00000236192 MCF2L2Q86YR7 1114 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 LZTS2Q9BRK4 669 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 TFR2Q9UP52 801 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 MAST1Q9Y2H9 1570 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 SPDYE5A6NIY4 337 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 A8MXQ7 604 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 SRGNP10124 158 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 ZNF18P17022 549 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 CDCA2Q69YH5 1023 aaPredicted RBP13.78□□□□□ -0.2
VAMP4-201ENST00000236192 APOA5Q6Q788 366 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 PPWD1Q96BP3 646 aaKnown RBP13.78□□□□□ -0.2
VAMP4-201ENST00000236192 IL25Q9H293 177 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 PABPC3Q9H361 631 aaKnown RBP13.78□□□□□ -0.2
VAMP4-201ENST00000236192 TIMMDC1Q9NPL8 285 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 TRPC5Q9UL62 973 aaPredicted RBP13.78□□□□□ -0.2
VAMP4-201ENST00000236192 AFF2P51816 1311 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 ATP5J2-PTCD1G3V325 749 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 PTCD1O75127 700 aaKnown RBP13.78□□□□□ -0.2
VAMP4-201ENST00000236192 MT-ND3P03897 115 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 BCRP11274 1271 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 HMOX2P30519 316 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 SLC1A4P43007 532 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 EPHB1P54762 984 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 NCALDP61601 193 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 CALML6Q8TD86 181 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 SPC25Q9HBM1 224 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 RPL26L1Q9UNX3 145 aaKnown RBP13.78□□□□□ -0.2
VAMP4-201ENST00000236192 SMG5Q9UPR3 1016 aaKnown RBP13.78□□□□□ -0.2
VAMP4-201ENST00000236192 ATP10DQ9P241 1426 aa13.78□□□□□ -0.2
VAMP4-201ENST00000236192 KRT16P08779 473 aa13.77□□□□□ -0.2
VAMP4-201ENST00000236192 XRCC5P13010 732 aaKnown RBP13.77□□□□□ -0.2
VAMP4-201ENST00000236192 TRAPPC10P48553 1259 aa13.77□□□□□ -0.2
VAMP4-201ENST00000236192 QPCTQ16769 361 aa13.77□□□□□ -0.2
VAMP4-201ENST00000236192 LETM2Q2VYF4 491 aa13.77□□□□□ -0.2
VAMP4-201ENST00000236192 CEP55Q53EZ4 464 aa13.77□□□□□ -0.2
VAMP4-201ENST00000236192 MPRIPQ6WCQ1 1025 aa13.77□□□□□ -0.2
VAMP4-201ENST00000236192 GJB4Q9NTQ9 266 aa13.77□□□□□ -0.2
VAMP4-201ENST00000236192 CCPG1Q9ULG6 757 aa13.77□□□□□ -0.2
VAMP4-201ENST00000236192 FAM47DPA6NHR8 397 aa13.77□□□□□ -0.2
VAMP4-201ENST00000236192 EEF1B2P24534 225 aaKnown RBP13.77□□□□□ -0.2
VAMP4-201ENST00000236192 GNA11P29992 359 aa13.77□□□□□ -0.2
VAMP4-201ENST00000236192 TRPC1P48995 793 aa13.77□□□□□ -0.2
VAMP4-201ENST00000236192 ZNF268Q14587 947 aaPredicted RBP13.77□□□□□ -0.2
VAMP4-201ENST00000236192 ALKBH5Q6P6C2 394 aaKnown RBP13.77□□□□□ -0.2
VAMP4-201ENST00000236192 C1orf228Q6PIY5 440 aa13.77□□□□□ -0.2
VAMP4-201ENST00000236192 C1orf131Q8NDD1 294 aaKnown RBP13.77□□□□□ -0.2
VAMP4-201ENST00000236192 NACA2Q9H009 215 aa13.77□□□□□ -0.2
VAMP4-201ENST00000236192 PREBQ9HCU5 417 aa13.77□□□□□ -0.2
VAMP4-201ENST00000236192 TMED5Q9Y3A6 229 aa13.77□□□□□ -0.2
VAMP4-201ENST00000236192 A0A1W2PQJ5 194 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 POTEFA5A3E0 1075 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 HSPA13P48723 471 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 AIFM3Q96NN9 605 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 KLHL4Q9C0H6 718 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 NPHS2Q9NP85 383 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 SENP1Q9P0U3 644 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 HBS1LQ9Y450 684 aaKnown RBP13.77□□□□□ -0.21
VAMP4-201ENST00000236192 LAMC1P11047 1609 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 NUP153P49790 1475 aaKnown RBP13.77□□□□□ -0.21
VAMP4-201ENST00000236192 ARHGEF40Q8TER5 1519 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 VAV1P15498 845 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 CASP1P29466 404 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 AMPD2Q01433 879 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 SGSM1Q2NKQ1 1148 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 BTNL9Q6UXG8 535 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 CFAP65Q6ZU64 1925 aaKnown RBP13.77□□□□□ -0.21
VAMP4-201ENST00000236192 PPIP5K2O43314 1243 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 UNC5CO95185 931 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 FGAP02671 866 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 POTEIP0CG38 1075 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 LONRF1Q17RB8 773 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 PCNX4Q63HM2 1172 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 CRLF3Q8IUI8 442 aa13.77□□□□□ -0.21
VAMP4-201ENST00000236192 RBM46Q8TBY0 533 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms