RNA–Protein interactions for RNA: ENST00000230461.10

TMEM30A-201, Transcript of transmembrane protein 30A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM30A, Length 4,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-201ENST00000230461 CYTH3O43739 400 aa17.12■□□□□ 0.33
TMEM30A-201ENST00000230461 ZSCAN20P17040 1043 aaPredicted RBP17.12■□□□□ 0.33
TMEM30A-201ENST00000230461 RHPN2Q8IUC4 686 aa17.12■□□□□ 0.33
TMEM30A-201ENST00000230461 SMAP1Q8IYB5 467 aaPredicted RBP17.12■□□□□ 0.33
TMEM30A-201ENST00000230461 PRDM10Q9NQV6 1147 aa17.12■□□□□ 0.33
TMEM30A-201ENST00000230461 RNF8O76064 485 aa17.12■□□□□ 0.33
TMEM30A-201ENST00000230461 GNAT1P11488 350 aa17.12■□□□□ 0.33
TMEM30A-201ENST00000230461 VAMP7P51809 220 aa17.12■□□□□ 0.33
TMEM30A-201ENST00000230461 HUNKP57058 714 aa17.12■□□□□ 0.33
TMEM30A-201ENST00000230461 NFX1Q12986 1120 aaKnown RBP17.12■□□□□ 0.33
TMEM30A-201ENST00000230461 CEP128Q6ZU80 1094 aa17.12■□□□□ 0.33
TMEM30A-201ENST00000230461 CATSPER3Q86XQ3 398 aa17.12■□□□□ 0.33
TMEM30A-201ENST00000230461 TSC1Q92574 1164 aa17.12■□□□□ 0.33
TMEM30A-201ENST00000230461 PITPNM2Q9BZ72 1349 aa17.11■□□□□ 0.33
TMEM30A-201ENST00000230461 TNPO2O14787 897 aaKnown RBP17.11■□□□□ 0.33
TMEM30A-201ENST00000230461 RAB20Q9NX57 234 aa17.11■□□□□ 0.33
TMEM30A-201ENST00000230461 ZNF157P51786 506 aaPredicted RBP17.11■□□□□ 0.33
TMEM30A-201ENST00000230461 POLR3CQ9BUI4 534 aaPredicted RBP17.11■□□□□ 0.33
TMEM30A-201ENST00000230461 MAP3K20Q9NYL2 800 aaKnown RBP17.11■□□□□ 0.33
TMEM30A-201ENST00000230461 AK9Q5TCS8 1911 aa17.11■□□□□ 0.33
TMEM30A-201ENST00000230461 KCPQ6ZWJ8 1503 aa17.11■□□□□ 0.33
TMEM30A-201ENST00000230461 LRRC53A6NM62 1247 aa17.11■□□□□ 0.33
TMEM30A-201ENST00000230461 ZNF568Q3ZCX4 644 aa17.11■□□□□ 0.33
TMEM30A-201ENST00000230461 PPP1R2P3Q6NXS1 205 aa17.11■□□□□ 0.33
TMEM30A-201ENST00000230461 FRMD5Q7Z6J6 570 aa17.11■□□□□ 0.33
TMEM30A-201ENST00000230461 GPRC5AQ8NFJ5 357 aa17.11■□□□□ 0.33
TMEM30A-201ENST00000230461 RAB17Q9H0T7 212 aa17.11■□□□□ 0.33
TMEM30A-201ENST00000230461 CD58P19256 250 aa17.11■□□□□ 0.33
TMEM30A-201ENST00000230461 COL9A3Q14050 684 aaPredicted RBP17.11■□□□□ 0.33
TMEM30A-201ENST00000230461 SPOUT1Q5T280 376 aaKnown RBP17.11■□□□□ 0.33
TMEM30A-201ENST00000230461 SND1Q7KZF4 910 aaKnown RBP eCLIP17.11■□□□□ 0.333e-7■■□□□ 12.2
TMEM30A-201ENST00000230461 TSNARE1Q96NA8 513 aa17.11■□□□□ 0.33
TMEM30A-201ENST00000230461 MYO1EQ12965 1108 aa17.1■□□□□ 0.33
TMEM30A-201ENST00000230461 EARS2Q5JPH6 523 aaKnown RBP17.1■□□□□ 0.33
TMEM30A-201ENST00000230461 TEX2Q8IWB9 1127 aa17.1■□□□□ 0.33
TMEM30A-201ENST00000230461 MOV10L1Q9BXT6 1211 aaKnown RBP17.1■□□□□ 0.33
TMEM30A-201ENST00000230461 A0A1B0GTH6 734 aa17.1■□□□□ 0.33
TMEM30A-201ENST00000230461 SCYL2Q6P3W7 929 aa17.1■□□□□ 0.33
TMEM30A-201ENST00000230461 SAMD3Q8N6K7 520 aa17.1■□□□□ 0.33
TMEM30A-201ENST00000230461 GPRASP2Q96D09 838 aa17.1■□□□□ 0.33
TMEM30A-201ENST00000230461 FAM208AQ9UK61 1670 aaKnown RBP17.1■□□□□ 0.33
TMEM30A-201ENST00000230461 E7EVH7 732 aa17.1■□□□□ 0.33
TMEM30A-201ENST00000230461 CELF2O95319 508 aaKnown RBP17.1■□□□□ 0.33
TMEM30A-201ENST00000230461 SRGAP1Q7Z6B7 1085 aa17.1■□□□□ 0.33
TMEM30A-201ENST00000230461 SAAL1Q96ER3 474 aa17.1■□□□□ 0.33
TMEM30A-201ENST00000230461 MRPL4Q9BYD3 311 aaKnown RBP17.1■□□□□ 0.33
TMEM30A-201ENST00000230461 STIM2Q9P246 746 aa17.1■□□□□ 0.33
TMEM30A-201ENST00000230461 VPS18Q9P253 973 aa17.1■□□□□ 0.33
TMEM30A-201ENST00000230461 DDX41Q9UJV9 622 aaKnown RBP17.1■□□□□ 0.33
TMEM30A-201ENST00000230461 JRKLQ9Y4A0 524 aa17.1■□□□□ 0.33
TMEM30A-201ENST00000230461 PCDHAC2Q9Y5I4 1007 aa17.1■□□□□ 0.33
TMEM30A-201ENST00000230461 CAPN9O14815 690 aa17.09■□□□□ 0.33
TMEM30A-201ENST00000230461 BRD3Q15059 726 aa17.09■□□□□ 0.33
TMEM30A-201ENST00000230461 MICALCLQ6ZW33 695 aa17.09■□□□□ 0.33
TMEM30A-201ENST00000230461 ABI1Q8IZP0 508 aa17.09■□□□□ 0.33
TMEM30A-201ENST00000230461 PLEKHA4Q9H4M7 779 aa17.09■□□□□ 0.33
TMEM30A-201ENST00000230461 NPM3O75607 178 aaKnown RBP17.09■□□□□ 0.33
TMEM30A-201ENST00000230461 TRIM49P0CI25 452 aa17.09■□□□□ 0.33
TMEM30A-201ENST00000230461 TRIM49CP0CI26 452 aa17.09■□□□□ 0.33
TMEM30A-201ENST00000230461 GRB10Q13322 594 aa17.09■□□□□ 0.33
TMEM30A-201ENST00000230461 MKL1Q969V6 931 aa17.09■□□□□ 0.33
TMEM30A-201ENST00000230461 ZNF668Q96K58 619 aaPredicted RBP17.09■□□□□ 0.33
TMEM30A-201ENST00000230461 EDEM3Q9BZQ6 932 aa17.09■□□□□ 0.33
TMEM30A-201ENST00000230461 TNFAIP2Q03169 654 aa17.09■□□□□ 0.33
TMEM30A-201ENST00000230461 TXNDC16Q9P2K2 825 aa17.09■□□□□ 0.33
TMEM30A-201ENST00000230461 MAPK4P31152 587 aa17.09■□□□□ 0.33
TMEM30A-201ENST00000230461 EFNA5P52803 228 aa17.09■□□□□ 0.33
TMEM30A-201ENST00000230461 ZNF667Q5HYK9 610 aa17.09■□□□□ 0.33
TMEM30A-201ENST00000230461 SCFD2Q8WU76 684 aa17.09■□□□□ 0.33
TMEM30A-201ENST00000230461 NACA2Q9H009 215 aa17.09■□□□□ 0.33
TMEM30A-201ENST00000230461 NFIBO00712 420 aa17.08■□□□□ 0.33
TMEM30A-201ENST00000230461 STK10O94804 968 aaKnown RBP17.08■□□□□ 0.33
TMEM30A-201ENST00000230461 MOCS3O95396 460 aa17.08■□□□□ 0.33
TMEM30A-201ENST00000230461 EDRF1Q3B7T1 1238 aa17.08■□□□□ 0.33
TMEM30A-201ENST00000230461 DNAJC21Q5F1R6 531 aaKnown RBP17.08■□□□□ 0.33
TMEM30A-201ENST00000230461 KRT39Q6A163 491 aa17.08■□□□□ 0.33
TMEM30A-201ENST00000230461 ILDR1Q86SU0 546 aaPredicted RBP17.08■□□□□ 0.33
TMEM30A-201ENST00000230461 CCDC117Q8IWD4 279 aaPredicted RBP17.08■□□□□ 0.33
TMEM30A-201ENST00000230461 PPP1R14CQ8TAE6 165 aa17.08■□□□□ 0.33
TMEM30A-201ENST00000230461 OGFRQ9NZT2 677 aa17.08■□□□□ 0.33
TMEM30A-201ENST00000230461 IFNB1P01574 187 aa17.08■□□□□ 0.32
TMEM30A-201ENST00000230461 ADAT2Q7Z6V5 191 aaKnown RBP17.08■□□□□ 0.32
TMEM30A-201ENST00000230461 SYT2Q8N9I0 419 aaPredicted RBP17.08■□□□□ 0.32
TMEM30A-201ENST00000230461 RDM1Q8NG50 284 aa17.08■□□□□ 0.32
TMEM30A-201ENST00000230461 SNX25Q9H3E2 840 aa17.08■□□□□ 0.32
TMEM30A-201ENST00000230461 SMARCAD1Q9H4L7 1026 aa17.08■□□□□ 0.32
TMEM30A-201ENST00000230461 SYNPO2Q9UMS6 1093 aa17.08■□□□□ 0.32
TMEM30A-201ENST00000230461 RNF149Q8NC42 400 aa17.08■□□□□ 0.32
TMEM30A-201ENST00000230461 PAIP2Q9BPZ3 127 aaKnown RBP17.08■□□□□ 0.32
TMEM30A-201ENST00000230461 MRPL47Q9HD33 250 aaKnown RBP17.08■□□□□ 0.32
TMEM30A-201ENST00000230461 TOPORSQ9NS56 1045 aaPredicted RBP17.08■□□□□ 0.32
TMEM30A-201ENST00000230461 MED7O43513 233 aa17.08■□□□□ 0.32
TMEM30A-201ENST00000230461 PRKCEQ02156 737 aa17.08■□□□□ 0.32
TMEM30A-201ENST00000230461 EVX2Q03828 476 aa17.08■□□□□ 0.32
TMEM30A-201ENST00000230461 MFSD14CQ5VZR4 134 aa17.08■□□□□ 0.32
TMEM30A-201ENST00000230461 TOGARAM2Q6ZUX3 1019 aa17.08■□□□□ 0.32
TMEM30A-201ENST00000230461 ATRIPQ8WXE1 791 aa17.08■□□□□ 0.32
TMEM30A-201ENST00000230461 RABGGTAQ92696 567 aa17.08■□□□□ 0.32
TMEM30A-201ENST00000230461 ANKEF1Q9NU02 776 aa17.08■□□□□ 0.32
TMEM30A-201ENST00000230461 AGO2Q9UKV8 859 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms