RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 ZNF577Q9BSK1 485 aa24■■□□□ 1.43
SMARCD2-201ENST00000225742 DMAC2Q9NW81 257 aa24■■□□□ 1.43
SMARCD2-201ENST00000225742 SMARCAL1Q9NZC9 954 aa24■■□□□ 1.43
SMARCD2-201ENST00000225742 EHD2Q9NZN4 543 aa24■■□□□ 1.43
SMARCD2-201ENST00000225742 CLIC2O15247 247 aa24■■□□□ 1.43
SMARCD2-201ENST00000225742 PAK2Q13177 524 aa24■■□□□ 1.43
SMARCD2-201ENST00000225742 ENOX2Q16206 610 aaKnown RBP24■■□□□ 1.43
SMARCD2-201ENST00000225742 AEBP2Q6ZN18 517 aaPredicted RBP24■■□□□ 1.43
SMARCD2-201ENST00000225742 EIF1ADQ8N9N8 165 aaKnown RBP24■■□□□ 1.43
SMARCD2-201ENST00000225742 GMLQ99445 158 aa24■■□□□ 1.43
SMARCD2-201ENST00000225742 KIF4AO95239 1232 aa23.99■■□□□ 1.43
SMARCD2-201ENST00000225742 H2AFZP0C0S5 128 aa23.99■■□□□ 1.43
SMARCD2-201ENST00000225742 NMT1P30419 496 aaKnown RBP23.99■■□□□ 1.43
SMARCD2-201ENST00000225742 SLC7A5Q01650 507 aa23.99■■□□□ 1.43
SMARCD2-201ENST00000225742 H2AFVQ71UI9 128 aa23.99■■□□□ 1.43
SMARCD2-201ENST00000225742 SLC9A9Q8IVB4 645 aa23.99■■□□□ 1.43
SMARCD2-201ENST00000225742 FAM178BQ8IXR5 827 aa23.99■■□□□ 1.43
SMARCD2-201ENST00000225742 SH3GL2Q99962 352 aa23.99■■□□□ 1.43
SMARCD2-201ENST00000225742 STK33Q9BYT3 514 aa23.99■■□□□ 1.43
SMARCD2-201ENST00000225742 TMEM59LQ9UK28 342 aa23.99■■□□□ 1.43
SMARCD2-201ENST00000225742 FRMD4BQ9Y2L6 1034 aa23.99■■□□□ 1.43
SMARCD2-201ENST00000225742 CNTNAP1P78357 1384 aa23.99■■□□□ 1.43
SMARCD2-201ENST00000225742 SMCHD1A6NHR9 2005 aa23.99■■□□□ 1.43
SMARCD2-201ENST00000225742 CCDC172P0C7W6 258 aa23.98■■□□□ 1.43
SMARCD2-201ENST00000225742 BCRP11274 1271 aa23.98■■□□□ 1.43
SMARCD2-201ENST00000225742 NIPA1Q7RTP0 329 aa23.98■■□□□ 1.43
SMARCD2-201ENST00000225742 SYCE1Q8N0S2 351 aa23.98■■□□□ 1.43
SMARCD2-201ENST00000225742 LRRC57Q8N9N7 239 aa23.98■■□□□ 1.43
SMARCD2-201ENST00000225742 USP38Q8NB14 1042 aa23.98■■□□□ 1.43
SMARCD2-201ENST00000225742 FIZ1Q96SL8 496 aa23.98■■□□□ 1.43
SMARCD2-201ENST00000225742 CHMP2AO43633 222 aa23.98■■□□□ 1.43
SMARCD2-201ENST00000225742 FMO5P49326 533 aa23.98■■□□□ 1.43
SMARCD2-201ENST00000225742 KCNA1Q09470 495 aa23.98■■□□□ 1.43
SMARCD2-201ENST00000225742 ALCAMQ13740 583 aa23.98■■□□□ 1.43
SMARCD2-201ENST00000225742 RTKN2Q8IZC4 609 aa23.98■■□□□ 1.43
SMARCD2-201ENST00000225742 OGFOD1Q8N543 542 aa23.98■■□□□ 1.43
SMARCD2-201ENST00000225742 MTMR14Q8NCE2 650 aa23.98■■□□□ 1.43
SMARCD2-201ENST00000225742 ACTRT1Q8TDG2 376 aa23.98■■□□□ 1.43
SMARCD2-201ENST00000225742 GDAP1L1Q96MZ0 367 aa23.98■■□□□ 1.43
SMARCD2-201ENST00000225742 MXRA8Q9BRK3 442 aa23.98■■□□□ 1.43
SMARCD2-201ENST00000225742 UNC45AQ9H3U1 944 aa23.98■■□□□ 1.43
SMARCD2-201ENST00000225742 SFI1A8K8P3 1242 aa23.97■■□□□ 1.43
SMARCD2-201ENST00000225742 HSF2BPO75031 334 aa23.97■■□□□ 1.43
SMARCD2-201ENST00000225742 MAPTP10636 758 aaKnown RBP23.97■■□□□ 1.43
SMARCD2-201ENST00000225742 LMNB1P20700 586 aa23.97■■□□□ 1.43
SMARCD2-201ENST00000225742 RFX1P22670 979 aa23.97■■□□□ 1.43
SMARCD2-201ENST00000225742 SOX5P35711 763 aa23.97■■□□□ 1.43
SMARCD2-201ENST00000225742 PPFIA1Q13136 1202 aa23.97■■□□□ 1.43
SMARCD2-201ENST00000225742 SLFN11Q7Z7L1 901 aa23.97■■□□□ 1.43
SMARCD2-201ENST00000225742 FAM83AQ86UY5 434 aa23.97■■□□□ 1.43
SMARCD2-201ENST00000225742 LDHDQ86WU2 507 aa23.97■■□□□ 1.43
SMARCD2-201ENST00000225742 MREGQ8N565 214 aa23.97■■□□□ 1.43
SMARCD2-201ENST00000225742 FAM76AQ8TAV0 307 aa23.97■■□□□ 1.43
SMARCD2-201ENST00000225742 TMEM174Q8WUU8 243 aa23.97■■□□□ 1.43
SMARCD2-201ENST00000225742 VTI1AQ96AJ9 217 aa23.97■■□□□ 1.43
SMARCD2-201ENST00000225742 CALR3Q96L12 384 aaKnown RBP23.97■■□□□ 1.43
SMARCD2-201ENST00000225742 PSMD1Q99460 953 aa23.97■■□□□ 1.43
SMARCD2-201ENST00000225742 NOP2P46087 812 aaKnown RBP23.96■■□□□ 1.43
SMARCD2-201ENST00000225742 HSD17B4P51659 736 aa23.96■■□□□ 1.43
SMARCD2-201ENST00000225742 ZNF772Q68DY9 489 aaPredicted RBP23.96■■□□□ 1.43
SMARCD2-201ENST00000225742 TPCN2Q8NHX9 752 aa23.96■■□□□ 1.43
SMARCD2-201ENST00000225742 STRA6Q9BX79 667 aa23.96■■□□□ 1.43
SMARCD2-201ENST00000225742 VPS33BQ9H267 617 aa23.96■■□□□ 1.43
SMARCD2-201ENST00000225742 AGPAT3Q9NRZ7 376 aa23.96■■□□□ 1.43
SMARCD2-201ENST00000225742 CLRN2A0PK11 232 aa23.96■■□□□ 1.43
SMARCD2-201ENST00000225742 ARHGEF35A5YM69 484 aa23.96■■□□□ 1.43
SMARCD2-201ENST00000225742 HEXIM1O94992 359 aaKnown RBP23.96■■□□□ 1.43
SMARCD2-201ENST00000225742 ARP10275 920 aa23.96■■□□□ 1.43
SMARCD2-201ENST00000225742 TNIP1Q15025 636 aa23.96■■□□□ 1.43
SMARCD2-201ENST00000225742 SUCLA2Q9P2R7 463 aaPredicted RBP23.96■■□□□ 1.43
SMARCD2-201ENST00000225742 TNS1Q9HBL0 1735 aaKnown RBP23.95■■□□□ 1.42
SMARCD2-201ENST00000225742 GOLGA6CA6NDK9 693 aa23.95■■□□□ 1.42
SMARCD2-201ENST00000225742 IPO5O00410 1097 aaKnown RBP23.95■■□□□ 1.42
SMARCD2-201ENST00000225742 GOLGA6DP0CG33 693 aa23.95■■□□□ 1.42
SMARCD2-201ENST00000225742 CAP2P40123 477 aa23.95■■□□□ 1.42
SMARCD2-201ENST00000225742 ZC2HC1CQ53FD0 456 aaPredicted RBP23.95■■□□□ 1.42
SMARCD2-201ENST00000225742 ODR4Q5SWX8 454 aa23.95■■□□□ 1.42
SMARCD2-201ENST00000225742 SLC30A5Q8TAD4 765 aa23.95■■□□□ 1.42
SMARCD2-201ENST00000225742 WHAMMQ8TF30 809 aa23.95■■□□□ 1.42
SMARCD2-201ENST00000225742 BCAS3Q9H6U6 928 aa23.95■■□□□ 1.42
SMARCD2-201ENST00000225742 GOLGA6AQ9NYA3 693 aa23.95■■□□□ 1.42
SMARCD2-201ENST00000225742 AJAP1Q9UKB5 411 aaPredicted RBP23.95■■□□□ 1.42
SMARCD2-201ENST00000225742 RPTORQ8N122 1335 aa23.95■■□□□ 1.42
SMARCD2-201ENST00000225742 DDX3XO00571 662 aaKnown RBP eCLIP23.94■■□□□ 1.423e-9■■■□□ 15.1
SMARCD2-201ENST00000225742 PPP1R37O75864 691 aa23.94■■□□□ 1.42
SMARCD2-201ENST00000225742 POLD1P28340 1107 aa23.94■■□□□ 1.42
SMARCD2-201ENST00000225742 PTGER2P43116 358 aa23.94■■□□□ 1.42
SMARCD2-201ENST00000225742 GHRHRQ02643 423 aa23.94■■□□□ 1.42
SMARCD2-201ENST00000225742 SAMD3Q8N6K7 520 aa23.94■■□□□ 1.42
SMARCD2-201ENST00000225742 SCFD2Q8WU76 684 aa23.94■■□□□ 1.42
SMARCD2-201ENST00000225742 RUFY1Q96T51 708 aa23.94■■□□□ 1.42
SMARCD2-201ENST00000225742 KRT12Q99456 494 aa23.94■■□□□ 1.42
SMARCD2-201ENST00000225742 LXNQ9BS40 222 aa23.94■■□□□ 1.42
SMARCD2-201ENST00000225742 MYH11P35749 1972 aa23.94■■□□□ 1.42
SMARCD2-201ENST00000225742 A6NNZ2 444 aa23.94■■□□□ 1.42
SMARCD2-201ENST00000225742 F8VZ95 297 aa23.94■■□□□ 1.42
SMARCD2-201ENST00000225742 KCNK3O14649 394 aa23.94■■□□□ 1.42
SMARCD2-201ENST00000225742 C21orf2O43822 256 aa23.94■■□□□ 1.42
SMARCD2-201ENST00000225742 SHOX2O60902 331 aaPredicted RBP23.94■■□□□ 1.42
SMARCD2-201ENST00000225742 ICAM1P05362 532 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms