RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 RAD21O60216 631 aa13.49□□□□□ -0.25
NUP88-201ENST00000225696 EVI5O60447 810 aa13.49□□□□□ -0.25
NUP88-201ENST00000225696 UFL1O94874 794 aa13.49□□□□□ -0.25
NUP88-201ENST00000225696 MRPL12P52815 198 aaKnown RBP13.49□□□□□ -0.25
NUP88-201ENST00000225696 CYP4A11Q02928 519 aa13.49□□□□□ -0.25
NUP88-201ENST00000225696 PLCB4Q15147 1175 aa13.49□□□□□ -0.25
NUP88-201ENST00000225696 BARGINQ6ZT62 677 aa13.49□□□□□ -0.25
NUP88-201ENST00000225696 KSR1Q8IVT5 923 aa13.49□□□□□ -0.25
NUP88-201ENST00000225696 CACNA2D3Q8IZS8 1091 aa13.49□□□□□ -0.25
NUP88-201ENST00000225696 CCT6BQ92526 530 aa13.49□□□□□ -0.25
NUP88-201ENST00000225696 ARHGEF1Q92888 912 aaKnown RBP13.49□□□□□ -0.25
NUP88-201ENST00000225696 TLCD1Q96CP7 247 aa13.49□□□□□ -0.25
NUP88-201ENST00000225696 PSMD1Q99460 953 aa13.49□□□□□ -0.25
NUP88-201ENST00000225696 ADAM7Q9H2U9 754 aa13.49□□□□□ -0.25
NUP88-201ENST00000225696 ZDHHC18Q9NUE0 388 aa13.49□□□□□ -0.25
NUP88-201ENST00000225696 TPX2Q9ULW0 747 aaKnown RBP13.49□□□□□ -0.25
NUP88-201ENST00000225696 BZW2Q9Y6E2 419 aaKnown RBP13.49□□□□□ -0.25
NUP88-201ENST00000225696 SMIM23A6NLE4 172 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 CCDC188H7C350 402 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 ZBTB5O15062 677 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 NR3C1P04150 777 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 IFI35P80217 286 aaPredicted RBP13.48□□□□□ -0.25
NUP88-201ENST00000225696 SETQ01105 290 aaPredicted RBP13.48□□□□□ -0.25
NUP88-201ENST00000225696 PRR16Q569H4 304 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 CPLX4Q7Z7G2 160 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 CEP57Q86XR8 500 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 PARP9Q8IXQ6 854 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 SLC30A5Q8TAD4 765 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 UHMK1Q8TAS1 419 aaKnown RBP13.48□□□□□ -0.25
NUP88-201ENST00000225696 ALG3Q92685 438 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 RNF25Q96BH1 459 aaPredicted RBP13.48□□□□□ -0.25
NUP88-201ENST00000225696 RUSC1Q9BVN2 902 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 SLITRK6Q9H5Y7 841 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 BCS1LQ9Y276 419 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 DAGLAQ9Y4D2 1042 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 SPDYE3A6NKU9 549 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 PPFIA2O75334 1257 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 TTLL1O95922 423 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 IFFO1Q0D2I5 559 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 COG2Q14746 738 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 IFI16Q16666 785 aaKnown RBP13.48□□□□□ -0.25
NUP88-201ENST00000225696 PPP4R3CPQ6ZMV5 832 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 CYP2W1Q8TAV3 490 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 XPO6Q96QU8 1125 aaKnown RBP13.48□□□□□ -0.25
NUP88-201ENST00000225696 FMO2Q99518 471 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 TMOD4Q9NZQ9 345 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 CHORDC1Q9UHD1 332 aaPredicted RBP13.48□□□□□ -0.25
NUP88-201ENST00000225696 COG5Q9UP83 839 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 SNX24Q9Y343 169 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 UTP11Q9Y3A2 253 aaKnown RBP13.48□□□□□ -0.25
NUP88-201ENST00000225696 SPATA31A5Q5VU36 1347 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 SPATA31A7Q8IWB4 1347 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 CNTNAP4Q9C0A0 1308 aa13.48□□□□□ -0.25
NUP88-201ENST00000225696 TLDC2A0PJX2 215 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 TGFB1I1O43294 461 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 CTNND1O60716 968 aaKnown RBP13.47□□□□□ -0.25
NUP88-201ENST00000225696 RPS6KA4O75676 772 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 CHN1P15882 459 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 DRP2Q13474 957 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 MTMR3Q13615 1198 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 E2F5Q15329 346 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 PREPLQ4J6C6 727 aaPredicted RBP13.47□□□□□ -0.25
NUP88-201ENST00000225696 ERMARDQ5T6L9 678 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 ZDHHC14Q8IZN3 488 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 CCDC26Q8TAB7 109 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 ETNPPLQ8TBG4 499 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 HVCN1Q96D96 273 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 SCLT1Q96NL6 688 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 ZNF317Q96PQ6 595 aaPredicted RBP13.47□□□□□ -0.25
NUP88-201ENST00000225696 GPR88Q9GZN0 384 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 GOPCQ9HD26 462 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 MCM8Q9UJA3 840 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 EP400Q96L91 3159 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 FAM86B1E9PN63 330 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 ZBTB39O15060 712 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 FAM86B2P0C5J1 330 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 GCFC2P16383 781 aaKnown RBP13.47□□□□□ -0.25
NUP88-201ENST00000225696 HOXA7P31268 230 aaPredicted RBP13.47□□□□□ -0.25
NUP88-201ENST00000225696 PLTPP55058 493 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 PPATQ06203 517 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 KLRC3Q07444 240 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 QRICH1Q2TAL8 776 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 ZC2HC1CQ53FD0 456 aaPredicted RBP13.47□□□□□ -0.25
NUP88-201ENST00000225696 GKAP1Q5VSY0 366 aaPredicted RBP13.47□□□□□ -0.25
NUP88-201ENST00000225696 DUPD1Q68J44 220 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 ZDHHC24Q6UX98 284 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 FBXO25Q8TCJ0 367 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 LENG9Q96B70 501 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 BORCS6Q96GS4 357 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 SGSM3Q96HU1 749 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 MXD3Q9BW11 206 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 ANO3Q9BYT9 981 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 THAP2Q9H0W7 228 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 BHMT2Q9H2M3 363 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 AMFRQ9UKV5 643 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 PCDHA1Q9Y5I3 950 aa13.47□□□□□ -0.25
NUP88-201ENST00000225696 PITPNM2Q9BZ72 1349 aa13.46□□□□□ -0.25
NUP88-201ENST00000225696 PLIN4Q96Q06 1357 aa13.46□□□□□ -0.25
NUP88-201ENST00000225696 A0A0A6YYK5 440 aaPredicted RBP13.46□□□□□ -0.25
NUP88-201ENST00000225696 FAM196BA6NMK8 535 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms