RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 WHAMMQ8TF30 809 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 ATP6V0A1Q93050 837 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 RUSC1Q9BVN2 902 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 PCDHAC2Q9Y5I4 1007 aa13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 PHRF1Q9P1Y6 1649 aaKnown RBP13.39□□□□□ -0.27
TM9SF4-201ENST00000217315 ALS2Q96Q42 1657 aa13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 LRRIQ3A6PVS8 624 aaPredicted RBP13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 EZH2Q15910 746 aaKnown RBP13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 GLG1Q92896 1179 aa13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 SEL1LQ9UBV2 794 aa13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 DISP2A7MBM2 1401 aa13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 NOP56O00567 594 aaKnown RBP13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 RXRBP28702 533 aa13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 DCAF15Q66K64 600 aa13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 AMIGO3Q86WK7 504 aa13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 PRPF38AQ8NAV1 312 aaKnown RBP13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 MPHOSPH6Q99547 160 aaKnown RBP13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 NSRP1Q9H0G5 558 aaKnown RBP13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 SERPINA10Q9UK55 444 aa13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 ZNF142P52746 1687 aaPredicted RBP13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 GAS8O95995 478 aa13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 P4HBP07237 508 aaKnown RBP13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 QARSP47897 775 aaKnown RBP13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 CIAPIN1Q6FI81 312 aa13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 RNF207Q6ZRF8 634 aa13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 PPM1EQ8WY54 764 aa13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 PACSIN1Q9BY11 444 aa13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 TMEM39BQ9GZU3 492 aa13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 INTS2Q9H0H0 1204 aaKnown RBP13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 SAMD15Q9P1V8 674 aa13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 AMACRQ9UHK6 382 aa13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 FEM1BQ9UK73 627 aa13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 COL1A1P02452 1464 aaPredicted RBP13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 EMSYQ7Z589 1322 aa13.38□□□□□ -0.27
TM9SF4-201ENST00000217315 EVI5O60447 810 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 SPP2Q13103 211 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 EPHA7Q15375 998 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 MEA1Q16626 185 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 MTERF2Q49AM1 385 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 HAS1Q92839 578 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 PAGR1Q9BTK6 254 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 HPCAL4Q9UM19 191 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 RCCD1A6NED2 376 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 MYO1FO00160 1098 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 NR1D1P20393 614 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 CARSP49589 748 aaKnown RBP13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 SNX1Q13596 522 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 GIT2Q14161 759 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 CLUL1Q15846 466 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 C15orf52Q6ZUT6 534 aaKnown RBP13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 MGARPQ8TDB4 240 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 MTMR8Q96EF0 704 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 SAAL1Q96ER3 474 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 TUFT1Q9NNX1 390 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 PLAAQ9Y263 795 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 CCDC188H7C350 402 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 ATP2A1O14983 1001 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 SOX5P35711 763 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 VAMP7P51809 220 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 GALCP54803 685 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 KLHDC7AQ5VTJ3 777 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 RINT1Q6NUQ1 792 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 APTXQ7Z2E3 356 aaKnown RBP13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 FMO2Q99518 471 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 AZI2Q9H6S1 392 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 AS3MTQ9HBK9 375 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 FAM114A2Q9NRY5 505 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 GINS2Q9Y248 185 aa13.37□□□□□ -0.27
TM9SF4-201ENST00000217315 KRT19P08727 400 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 NSFP46459 744 aaKnown RBP13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 NAB2Q15742 525 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 MIIPQ5JXC2 388 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 WDR93Q6P2C0 686 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 TRIM59Q8IWR1 403 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 REXO2Q9Y3B8 237 aaKnown RBP13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 NOC2LQ9Y3T9 749 aaKnown RBP13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 PPFIA4O75335 1185 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 AKAP3O75969 853 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 IFNB1P01574 187 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 FTLP02792 175 aaPredicted RBP13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 BAG6P46379 1132 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 FMO5P49326 533 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 CDK17Q00537 523 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 DR1Q01658 176 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 HAUS6Q7Z4H7 955 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 SH2D3CQ8N5H7 860 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 VCPKMTQ9H867 229 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 NOVA2Q9UNW9 492 aaKnown RBP13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 AGTPBP1Q9UPW5 1226 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 SNX24Q9Y343 169 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 MYO3BQ8WXR4 1341 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 FAM86B1E9PN63 330 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 SART1O43290 800 aaKnown RBP13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 FAM86B2P0C5J1 330 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 TMEM119Q4V9L6 283 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 ZNF772Q68DY9 489 aaPredicted RBP13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 CERKQ8TCT0 537 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 AGBL1Q96MI9 1066 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 EHD4Q9H223 541 aa13.36□□□□□ -0.27
TM9SF4-201ENST00000217315 ZNF70Q9UC06 446 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms