RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 SFMBT2Q5VUG0 894 aa32.57■■■□□ 2.8
PABPN1-201ENST00000216727 SLC9A9Q8IVB4 645 aa32.57■■■□□ 2.8
PABPN1-201ENST00000216727 CHST13Q8NET6 341 aa32.57■■■□□ 2.8
PABPN1-201ENST00000216727 UBXN4Q92575 508 aa32.57■■■□□ 2.8
PABPN1-201ENST00000216727 DEF6Q9H4E7 631 aa32.57■■■□□ 2.8
PABPN1-201ENST00000216727 PCDHA10Q9Y5I2 948 aa32.57■■■□□ 2.8
PABPN1-201ENST00000216727 PTPRFP10586 1907 aa32.57■■■□□ 2.8
PABPN1-201ENST00000216727 GTPBP10A4D1E9 387 aaKnown RBP32.56■■■□□ 2.8
PABPN1-201ENST00000216727 RGS20O76081 388 aa32.56■■■□□ 2.8
PABPN1-201ENST00000216727 KCNA2P16389 499 aa32.56■■■□□ 2.8
PABPN1-201ENST00000216727 DPY19L2P1Q6NXN4 242 aa32.56■■■□□ 2.8
PABPN1-201ENST00000216727 LACRTQ9GZZ8 138 aa32.56■■■□□ 2.8
PABPN1-201ENST00000216727 PLS3P13797 630 aa32.56■■■□□ 2.8
PABPN1-201ENST00000216727 CYP27A1Q02318 531 aa32.56■■■□□ 2.8
PABPN1-201ENST00000216727 PLS1Q14651 629 aa32.56■■■□□ 2.8
PABPN1-201ENST00000216727 SMAP1Q8IYB5 467 aaPredicted RBP32.56■■■□□ 2.8
PABPN1-201ENST00000216727 FAM186BQ8IYM0 893 aa32.56■■■□□ 2.8
PABPN1-201ENST00000216727 TMEM174Q8WUU8 243 aa32.56■■■□□ 2.8
PABPN1-201ENST00000216727 CCDC43Q96MW1 224 aaKnown RBP32.56■■■□□ 2.8
PABPN1-201ENST00000216727 NFASCO94856 1347 aa32.55■■■□□ 2.8
PABPN1-201ENST00000216727 RCCD1A6NED2 376 aa32.55■■■□□ 2.8
PABPN1-201ENST00000216727 ADM5C9JUS6 153 aa32.55■■■□□ 2.8
PABPN1-201ENST00000216727 KIF5AQ12840 1032 aa32.55■■■□□ 2.8
PABPN1-201ENST00000216727 EXOC3L4Q17RC7 722 aa32.55■■■□□ 2.8
PABPN1-201ENST00000216727 SLC9C1Q4G0N8 1177 aa32.55■■■□□ 2.8
PABPN1-201ENST00000216727 DCAF17Q5H9S7 520 aaPredicted RBP32.55■■■□□ 2.8
PABPN1-201ENST00000216727 KSR1Q8IVT5 923 aa32.55■■■□□ 2.8
PABPN1-201ENST00000216727 IKZF4Q9H2S9 585 aa32.55■■■□□ 2.8
PABPN1-201ENST00000216727 AKR1B10O60218 316 aa32.55■■■□□ 2.8
PABPN1-201ENST00000216727 SERPING1P05155 500 aa32.55■■■□□ 2.8
PABPN1-201ENST00000216727 LBX2Q6XYB7 198 aa32.55■■■□□ 2.8
PABPN1-201ENST00000216727 DRC1Q96MC2 740 aa32.55■■■□□ 2.8
PABPN1-201ENST00000216727 ST6GALNAC4Q9H4F1 302 aa32.55■■■□□ 2.8
PABPN1-201ENST00000216727 TMEM206Q9H813 350 aa32.55■■■□□ 2.8
PABPN1-201ENST00000216727 AIPL1Q9NZN9 384 aa32.55■■■□□ 2.8
PABPN1-201ENST00000216727 K7ENM7 598 aa32.54■■■□□ 2.8
PABPN1-201ENST00000216727 TLR2O60603 784 aa32.54■■■□□ 2.8
PABPN1-201ENST00000216727 USO1O60763 962 aaKnown RBP32.54■■■□□ 2.8
PABPN1-201ENST00000216727 DLK2Q6UY11 383 aa32.54■■■□□ 2.8
PABPN1-201ENST00000216727 IWS1Q96ST2 819 aa32.54■■■□□ 2.8
PABPN1-201ENST00000216727 IFIH1Q9BYX4 1025 aaKnown RBP32.54■■■□□ 2.8
PABPN1-201ENST00000216727 FBXL5Q9UKA1 691 aa32.54■■■□□ 2.8
PABPN1-201ENST00000216727 PCDHA13Q9Y5I0 950 aa32.54■■■□□ 2.8
PABPN1-201ENST00000216727 OTOFQ9HC10 1997 aa32.54■■■□□ 2.8
PABPN1-201ENST00000216727 BACH1O14867 736 aa32.53■■■□□ 2.8
PABPN1-201ENST00000216727 TREML2Q5T2D2 321 aa32.53■■■□□ 2.8
PABPN1-201ENST00000216727 TCERG1LQ5VWI1 586 aa32.53■■■□□ 2.8
PABPN1-201ENST00000216727 TFR2Q9UP52 801 aa32.53■■■□□ 2.8
PABPN1-201ENST00000216727 PON1P27169 355 aa32.53■■■□□ 2.8
PABPN1-201ENST00000216727 IREB2P48200 963 aaKnown RBP32.53■■■□□ 2.8
PABPN1-201ENST00000216727 GNPTABQ3T906 1256 aa32.53■■■□□ 2.8
PABPN1-201ENST00000216727 GBP6Q6ZN66 633 aa32.53■■■□□ 2.8
PABPN1-201ENST00000216727 FRMD4BQ9Y2L6 1034 aa32.53■■■□□ 2.8
PABPN1-201ENST00000216727 KIAA1217Q5T5P2 1943 aa32.52■■■□□ 2.8
PABPN1-201ENST00000216727 RBAK-RBAKDNI3L0D1 243 aa32.52■■■□□ 2.8
PABPN1-201ENST00000216727 DKC1O60832 514 aaKnown RBP eCLIP32.52■■■□□ 2.8
PABPN1-201ENST00000216727 KLHDC7AQ5VTJ3 777 aa32.52■■■□□ 2.8
PABPN1-201ENST00000216727 MAEAQ7L5Y9 396 aa32.52■■■□□ 2.8
PABPN1-201ENST00000216727 SLC17A8Q8NDX2 589 aa32.52■■■□□ 2.8
PABPN1-201ENST00000216727 DNERQ8NFT8 737 aa32.52■■■□□ 2.8
PABPN1-201ENST00000216727 MYO6Q9UM54 1294 aa32.52■■■□□ 2.8
PABPN1-201ENST00000216727 A0A0G2JMZ2 1700 aa32.52■■■□□ 2.8
PABPN1-201ENST00000216727 SLC9A1P19634 815 aa32.51■■■□□ 2.8
PABPN1-201ENST00000216727 APBA1Q02410 837 aa32.51■■■□□ 2.8
PABPN1-201ENST00000216727 UTP14CQ5TAP6 766 aaKnown RBP32.51■■■□□ 2.8
PABPN1-201ENST00000216727 RSRC2Q7L4I2 434 aaKnown RBP32.51■■■□□ 2.8
PABPN1-201ENST00000216727 SYCP3Q8IZU3 236 aa32.51■■■□□ 2.8
PABPN1-201ENST00000216727 CEP112Q8N8E3 955 aa32.51■■■□□ 2.8
PABPN1-201ENST00000216727 SPATA31C2B4DYI2 1134 aa32.51■■■□□ 2.79
PABPN1-201ENST00000216727 UCHL3P15374 230 aa32.51■■■□□ 2.79
PABPN1-201ENST00000216727 AMPD2Q01433 879 aa32.51■■■□□ 2.79
PABPN1-201ENST00000216727 PPP2R5AQ15172 486 aa32.51■■■□□ 2.79
PABPN1-201ENST00000216727 XKR9Q5GH70 373 aa32.51■■■□□ 2.79
PABPN1-201ENST00000216727 TXLNBQ8N3L3 684 aa32.51■■■□□ 2.79
PABPN1-201ENST00000216727 PPATQ06203 517 aa32.5■■■□□ 2.79
PABPN1-201ENST00000216727 SRGAP1Q7Z6B7 1085 aa32.5■■■□□ 2.79
PABPN1-201ENST00000216727 PROCA1Q8NCQ7 364 aaPredicted RBP32.5■■■□□ 2.79
PABPN1-201ENST00000216727 CNKSR2Q8WXI2 1034 aa32.5■■■□□ 2.79
PABPN1-201ENST00000216727 ATP6V0A1Q93050 837 aa32.5■■■□□ 2.79
PABPN1-201ENST00000216727 ACCSQ96QU6 501 aa32.5■■■□□ 2.79
PABPN1-201ENST00000216727 JPH1Q9HDC5 661 aaPredicted RBP32.5■■■□□ 2.79
PABPN1-201ENST00000216727 FBXO40Q9UH90 709 aa32.5■■■□□ 2.79
PABPN1-201ENST00000216727 LCTP09848 1927 aa32.5■■■□□ 2.79
PABPN1-201ENST00000216727 GTF2BQ00403 316 aa32.5■■■□□ 2.79
PABPN1-201ENST00000216727 TDRD12Q587J7 1177 aaKnown RBP32.5■■■□□ 2.79
PABPN1-201ENST00000216727 ANO5Q75V66 913 aa32.5■■■□□ 2.79
PABPN1-201ENST00000216727 OTUD6AQ7L8S5 288 aa32.5■■■□□ 2.79
PABPN1-201ENST00000216727 C12orf56Q8IXR9 622 aa32.5■■■□□ 2.79
PABPN1-201ENST00000216727 SYT17Q9BSW7 474 aa32.5■■■□□ 2.79
PABPN1-201ENST00000216727 TMEM150BA6NC51 233 aa32.49■■■□□ 2.79
PABPN1-201ENST00000216727 RAPGEF1Q13905 1077 aa32.49■■■□□ 2.79
PABPN1-201ENST00000216727 WHAMMP3Q1A5X7 153 aa32.49■■■□□ 2.79
PABPN1-201ENST00000216727 RIOX2Q8IUF8 465 aa32.49■■■□□ 2.79
PABPN1-201ENST00000216727 PFASO15067 1338 aa32.49■■■□□ 2.79
PABPN1-201ENST00000216727 PJA2O43164 708 aa32.48■■■□□ 2.79
PABPN1-201ENST00000216727 PSAPP07602 524 aa32.48■■■□□ 2.79
PABPN1-201ENST00000216727 ACTN1P12814 892 aa32.48■■■□□ 2.79
PABPN1-201ENST00000216727 CYP2J2P51589 502 aa32.48■■■□□ 2.79
PABPN1-201ENST00000216727 SNRPFP62306 86 aaKnown RBP32.48■■■□□ 2.79
PABPN1-201ENST00000216727 C9orf131Q5VYM1 1079 aa32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms