RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 LDHAP00338 332 aaKnown RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 ATF2P15336 505 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 MYL5Q02045 173 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 LRMPQ12912 555 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 TAF1BQ53T94 588 aaPredicted RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.68□□□□□ -1.82
NEB-201ENST00000172853 TGFBRAP1Q8WUH2 860 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 REXO5Q96IC2 774 aaKnown RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 CCDC17Q96LX7 622 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 ATP6V1HQ9UI12 483 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 ANKRD50Q9ULJ7 1429 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 MAGED2Q9UNF1 606 aaPredicted RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 IBTKQ9P2D0 1353 aaPredicted RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 PSMD3O43242 534 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 MUM1Q2TAK8 710 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 CCDC144BQ3MJ40 725 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 CABP7Q86V35 215 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 DEPDC1BQ8WUY9 529 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 TUBGCP2Q9BSJ2 902 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 P4HA2O15460 535 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 VPS4BO75351 444 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 DLATP10515 647 aaKnown RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 HSPD1P10809 573 aaKnown RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 FCER1AP12319 257 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 CNTN1Q12860 1018 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 STARD3Q14849 445 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 MTSS1LQ765P7 747 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 TREML1Q86YW5 311 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 GID8Q9NWU2 228 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 KLHL14Q9P2G3 628 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 BRD4O60885 1362 aaPredicted RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 CLCN1P35523 988 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 DUS1LQ6P1R4 473 aaKnown RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 ABI3Q9P2A4 366 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 TRPC4Q9UBN4 977 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 ELP1O95163 1332 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 GRK3P35626 688 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 ST13P50502 369 aaKnown RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 ARID5BQ14865 1188 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 TAS1R3Q7RTX0 852 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 GCOM2Q9BZD3 368 aaPredicted RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 FAM49AQ9H0Q0 323 aaPredicted RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 HOXC10Q9NYD6 342 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 DBNLQ9UJU6 430 aaKnown RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 PRDM4Q9UKN5 801 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 SETD1BQ9UPS6 1966 aaKnown RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 CUL7Q14999 1698 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 GRM8O00222 908 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 UBA1P22314 1058 aaKnown RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 PAX3P23760 479 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 CBFBQ13951 182 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 SLFN13Q68D06 897 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 WDR11Q9BZH6 1224 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 NMRK1Q9NWW6 199 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 VWA3AA6NCI4 1184 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 TBC1D1Q86TI0 1168 aaPredicted RBP3.67□□□□□ -1.82
NEB-201ENST00000172853 FBXO41Q8TF61 875 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 CAAP1Q9H8G2 361 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 CEBPAP49715 358 aaPredicted RBP3.67□□□□□ -1.82
NEB-201ENST00000172853 PTH1RQ03431 593 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 CAMK1Q14012 370 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 ANO4Q32M45 955 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 MFSD14BQ5SR56 506 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 TEDDM1Q5T9Z0 273 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 MCOLN3Q8TDD5 553 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 EXT2Q93063 718 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 SERPINI1Q99574 410 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 ZNF577Q9BSK1 485 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 CCDC90BQ9GZT6 254 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 ARMC7Q9H6L4 198 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 APPL1Q9UKG1 709 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 TNRQ92752 1358 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 MAGI1Q96QZ7 1491 aaPredicted RBP3.67□□□□□ -1.82
NEB-201ENST00000172853 BUB1BO60566 1050 aaPredicted RBP3.67□□□□□ -1.82
NEB-201ENST00000172853 GALNT17Q6IS24 598 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 CERKQ8TCT0 537 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 FRMD6Q96NE9 622 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 SARS2Q9NP81 518 aaKnown RBP3.67□□□□□ -1.82
NEB-201ENST00000172853 CTNND2Q9UQB3 1225 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 TRIM64A6NGJ6 449 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 MBD4O95243 580 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 TRAPPC10P48553 1259 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 TRIP10Q15642 601 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 ITPRIPL1Q6GPH6 555 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 CES5AQ6NT32 575 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 ERO1AQ96HE7 468 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 SPACA7Q96KW9 195 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 PIGUQ9H490 435 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 ENTPD7Q9NQZ7 604 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 DNAI1Q9UI46 699 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 TNFSF13BQ9Y275 285 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 STK38LQ9Y2H1 464 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 NCKAP5LQ9HCH0 1330 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 M0R3G1 203 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 CYP2J2P51589 502 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 DDI1Q8WTU0 396 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 C19orf60Q96EN9 201 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 CCDC134Q9H6E4 229 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 LZTS1Q9Y250 596 aa3.67□□□□□ -1.82
NEB-201ENST00000172853 ATP8A1Q9Y2Q0 1164 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms