RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 PCDH11XQ9BZA7 1347 aa16.29■□□□□ 0.2
PDZD4-201ENST00000164640 PCDH11YQ9BZA8 1340 aa16.29■□□□□ 0.2
PDZD4-201ENST00000164640 AGTP01019 485 aa16.28■□□□□ 0.2
PDZD4-201ENST00000164640 UCHL3P15374 230 aa16.28■□□□□ 0.2
PDZD4-201ENST00000164640 ATF3P18847 181 aa16.28■□□□□ 0.2
PDZD4-201ENST00000164640 ZNF268Q14587 947 aaPredicted RBP16.28■□□□□ 0.2
PDZD4-201ENST00000164640 ERP27Q96DN0 273 aa16.28■□□□□ 0.2
PDZD4-201ENST00000164640 ZBTB1Q9Y2K1 713 aa16.28■□□□□ 0.2
PDZD4-201ENST00000164640 RTCBQ9Y3I0 505 aaKnown RBP16.28■□□□□ 0.2
PDZD4-201ENST00000164640 E9PMD0 336 aa16.28■□□□□ 0.2
PDZD4-201ENST00000164640 NOL4O94818 638 aa16.28■□□□□ 0.2
PDZD4-201ENST00000164640 RASIP1Q5U651 963 aa16.28■□□□□ 0.2
PDZD4-201ENST00000164640 RNF25Q96BH1 459 aaPredicted RBP16.28■□□□□ 0.2
PDZD4-201ENST00000164640 ACSBG1Q96GR2 724 aa16.28■□□□□ 0.2
PDZD4-201ENST00000164640 NUDT12Q9BQG2 462 aa16.28■□□□□ 0.2
PDZD4-201ENST00000164640 SLC5A4Q9NY91 659 aa16.28■□□□□ 0.2
PDZD4-201ENST00000164640 HAO1Q9UJM8 370 aa16.28■□□□□ 0.2
PDZD4-201ENST00000164640 LTN1O94822 1766 aa16.28■□□□□ 0.2
PDZD4-201ENST00000164640 PVALEFA0A1B0GWK0 134 aa16.27■□□□□ 0.2
PDZD4-201ENST00000164640 LRRN2O75325 713 aa16.27■□□□□ 0.2
PDZD4-201ENST00000164640 PAEPP09466 180 aa16.27■□□□□ 0.2
PDZD4-201ENST00000164640 GRB10Q13322 594 aa16.27■□□□□ 0.2
PDZD4-201ENST00000164640 MESDQ14696 234 aa16.27■□□□□ 0.2
PDZD4-201ENST00000164640 LRRC55Q6ZSA7 311 aa16.27■□□□□ 0.2
PDZD4-201ENST00000164640 ZC3H18Q86VM9 953 aaKnown RBP16.27■□□□□ 0.2
PDZD4-201ENST00000164640 COA7Q96BR5 231 aa16.27■□□□□ 0.2
PDZD4-201ENST00000164640 L3MBTL3Q96JM7 780 aaPredicted RBP16.27■□□□□ 0.2
PDZD4-201ENST00000164640 ADAM22Q9P0K1 906 aa16.27■□□□□ 0.2
PDZD4-201ENST00000164640 AFF2P51816 1311 aa16.27■□□□□ 0.2
PDZD4-201ENST00000164640 CREB1P16220 341 aa16.27■□□□□ 0.2
PDZD4-201ENST00000164640 RIPK1Q13546 671 aa16.27■□□□□ 0.2
PDZD4-201ENST00000164640 SEL1L2Q5TEA6 688 aa16.27■□□□□ 0.2
PDZD4-201ENST00000164640 SLC35G2Q8TBE7 412 aa16.27■□□□□ 0.2
PDZD4-201ENST00000164640 GCNT4Q9P109 453 aa16.27■□□□□ 0.2
PDZD4-201ENST00000164640 BCS1LQ9Y276 419 aa16.27■□□□□ 0.2
PDZD4-201ENST00000164640 SPOPO43791 374 aa16.27■□□□□ 0.19
PDZD4-201ENST00000164640 RDH13Q8NBN7 331 aa16.27■□□□□ 0.19
PDZD4-201ENST00000164640 PLA2G12BQ9BX93 195 aa16.27■□□□□ 0.19
PDZD4-201ENST00000164640 BARHL2Q9NY43 387 aa16.27■□□□□ 0.19
PDZD4-201ENST00000164640 TOPAZ1Q8N9V7 1692 aa16.27■□□□□ 0.19
PDZD4-201ENST00000164640 KLC1Q07866 573 aa16.26■□□□□ 0.19
PDZD4-201ENST00000164640 BLMHQ13867 455 aa16.26■□□□□ 0.19
PDZD4-201ENST00000164640 RFX8Q6ZV50 586 aa16.26■□□□□ 0.19
PDZD4-201ENST00000164640 RAD54LQ92698 747 aa16.26■□□□□ 0.19
PDZD4-201ENST00000164640 PIGSQ96S52 555 aa16.26■□□□□ 0.19
PDZD4-201ENST00000164640 DCP1AQ9NPI6 582 aaPredicted RBP16.26■□□□□ 0.19
PDZD4-201ENST00000164640 FRMPD2Q68DX3 1309 aaPredicted RBP16.26■□□□□ 0.19
PDZD4-201ENST00000164640 SPDYE5A6NIY4 337 aa16.26■□□□□ 0.19
PDZD4-201ENST00000164640 THAP12O43422 761 aa16.26■□□□□ 0.19
PDZD4-201ENST00000164640 GNA14O95837 355 aa16.26■□□□□ 0.19
PDZD4-201ENST00000164640 RFC5P40937 340 aa16.26■□□□□ 0.19
PDZD4-201ENST00000164640 TRIM28Q13263 835 aaKnown RBP16.26■□□□□ 0.19
PDZD4-201ENST00000164640 LAMB3Q13751 1172 aa16.26■□□□□ 0.19
PDZD4-201ENST00000164640 ZRSR2Q15696 482 aaKnown RBP16.26■□□□□ 0.19
PDZD4-201ENST00000164640 KCNK18Q7Z418 384 aa16.26■□□□□ 0.19
PDZD4-201ENST00000164640 GBP5Q96PP8 586 aa16.26■□□□□ 0.19
PDZD4-201ENST00000164640 RPS6KC1Q96S38 1066 aa16.26■□□□□ 0.19
PDZD4-201ENST00000164640 CTNNAL1Q9UBT7 734 aa16.26■□□□□ 0.19
PDZD4-201ENST00000164640 STK17AQ9UEE5 414 aa16.26■□□□□ 0.19
PDZD4-201ENST00000164640 PPP1R9AQ9ULJ8 1098 aa16.26■□□□□ 0.19
PDZD4-201ENST00000164640 BZW2Q9Y6E2 419 aaKnown RBP16.26■□□□□ 0.19
PDZD4-201ENST00000164640 AFPP02771 609 aaKnown RBP16.26■□□□□ 0.19
PDZD4-201ENST00000164640 MMP13P45452 471 aa16.26■□□□□ 0.19
PDZD4-201ENST00000164640 TRAF1Q13077 416 aa16.26■□□□□ 0.19
PDZD4-201ENST00000164640 PIGWQ7Z7B1 504 aa16.26■□□□□ 0.19
PDZD4-201ENST00000164640 FITM2Q8N6M3 262 aa16.26■□□□□ 0.19
PDZD4-201ENST00000164640 ATXN2LQ8WWM7 1075 aaKnown RBP16.26■□□□□ 0.19
PDZD4-201ENST00000164640 C2CD2Q9Y426 696 aa16.26■□□□□ 0.19
PDZD4-201ENST00000164640 ERVV-2B6SEH9 535 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 ALDH3A1P30838 453 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 PRPHP41219 470 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 DTX3LQ8TDB6 740 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 TLCD1Q96CP7 247 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 BLOC1S4Q9NUP1 217 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 TXLNGQ9NUQ3 528 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 ATRNO75882 1429 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 IRF6O14896 467 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 RCN2Q14257 317 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 CNGA2Q16280 664 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 C10orf76Q5T2E6 689 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 UBAP2Q5T6F2 1119 aaKnown RBP16.25■□□□□ 0.19
PDZD4-201ENST00000164640 CCDC137Q6PK04 289 aaKnown RBP16.25■□□□□ 0.19
PDZD4-201ENST00000164640 UBL4BQ8N7F7 174 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 METTL5Q9NRN9 209 aaKnown RBP16.25■□□□□ 0.19
PDZD4-201ENST00000164640 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.25■□□□□ 0.19
PDZD4-201ENST00000164640 SCOCQ9UIL1 159 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 MTUS1Q9ULD2 1270 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 ZMYND8Q9ULU4 1186 aaPredicted RBP16.25■□□□□ 0.19
PDZD4-201ENST00000164640 USH1CQ9Y6N9 552 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 LINGO3P0C6S8 592 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 FERP16591 822 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 FGFR2P21802 821 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 ZBTB16Q05516 673 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 APBB1IPQ7Z5R6 666 aaPredicted RBP16.25■□□□□ 0.19
PDZD4-201ENST00000164640 CROCCP2Q86T23 111 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 CENPTQ96BT3 561 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 BRIP1Q9BX63 1249 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 FGFBP2Q9BYJ0 223 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 ERVK-5Q9HDB9 667 aa16.25■□□□□ 0.19
PDZD4-201ENST00000164640 PCDHA12Q9UN75 941 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms