RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 USP17L5A8MUK1 530 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 SERPING1P05155 500 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 RAD23BP54727 409 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 PPP2R5EQ16537 467 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 BEND6Q5SZJ8 279 aaPredicted RBP13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 DPH6Q7L8W6 267 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 RASGRP2Q7LDG7 609 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 MAP7D3Q8IWC1 876 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 REXO1L1PQ8IX06 675 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 CEP95Q96GE4 821 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 SGSM3Q96HU1 749 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 CCT8L2Q96SF2 557 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 ATP8A1Q9Y2Q0 1164 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 SPECC1L-ADORA2AF8WAN1 911 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 DPEP1P16444 411 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 MX2P20592 715 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 CCDC127Q96BQ5 260 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 DDX60Q8IY21 1712 aaKnown RBP13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 A0A1W2PQC6 194 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 LRRC53A6NM62 1247 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 MAP3K7O43318 606 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 TROVE2P10155 538 aaKnown RBP eCLIP13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 FCER1AP12319 257 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 PPM1KQ8N3J5 372 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 TEKT4Q8WW24 435 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 PDGFDQ9GZP0 370 aaPredicted RBP13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 SLCO1A2P46721 670 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 SEC24CP53992 1094 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 TPD52P55327 224 aaPredicted RBP13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 GRM4Q14833 912 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 CLUL1Q15846 466 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 ALKBH5Q6P6C2 394 aaKnown RBP13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 ST13P4Q8IZP2 240 aaPredicted RBP13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 VTI1AQ96AJ9 217 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 KANSL2Q9H9L4 492 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 MLXIPQ9HAP2 919 aa13.09□□□□□ -0.31
TSPAN9-201ENST00000011898 PNMA6FA0A0J9YX94 578 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 PVALEFA0A1B0GWK0 134 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 GYPCP04921 128 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 SEMA3FQ13275 785 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 ABCB5Q2M3G0 1257 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 FAM186BQ8IYM0 893 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 TBC1D16Q8TBP0 767 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 PAPOLBQ9NRJ5 636 aaKnown RBP13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 STXBP3O00186 592 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 ATP1A1P05023 1023 aaKnown RBP13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 POLR2MP0CAP2 368 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 GNAT1P11488 350 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 NUGGCQ68CJ6 796 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 ADSSL1Q8N142 457 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 DTNBP1Q96EV8 351 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 MAP3K14Q99558 947 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 TRIM9Q9C026 710 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 CAPN11Q9UMQ6 739 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 USTQ9Y2C2 406 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 PGRMC1O00264 195 aaKnown RBP13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 CTCFP49711 727 aaPredicted RBP13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 TOB1P50616 345 aaPredicted RBP13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 TROAPQ12815 778 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 KCNB1Q14721 858 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 NTRK3Q16288 839 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 ANKRD40Q6AI12 368 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 CYB5D1Q6P9G0 228 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 PAF1Q8N7H5 531 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 ZNF473Q8WTR7 871 aaKnown RBP13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 CCSER1Q9C0I3 900 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 TMEM260Q9NX78 707 aa13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 BAZ2BQ9UIF8 2168 aaKnown RBP13.08□□□□□ -0.32
TSPAN9-201ENST00000011898 K7ENM7 598 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 C21orf2O43822 256 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 TRPA1O75762 1119 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 GAS8O95995 478 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 FERP16591 822 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 UBXN2AP68543 259 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 DLGAP5Q15398 846 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 C12orf60Q5U649 245 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 HPS3Q969F9 1004 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 CYTH2Q99418 400 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 COA1Q9GZY4 146 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.07□□□□□ -0.327e-7■■■□□ 19.1
TSPAN9-201ENST00000011898 LRRN2O75325 713 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 USP14P54578 494 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 NBPF20Q3BBV1 942 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 HOOK2Q96ED9 719 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 BHMT2Q9H2M3 363 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 CD209Q9NNX6 404 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 AGPAT5Q9NUQ2 364 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 GFPT2O94808 682 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 PRPF6O94906 941 aaKnown RBP13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 PSMC2P35998 433 aaKnown RBP13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 KLC1Q07866 573 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 DHX9Q08211 1270 aaKnown RBP13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 FOXP4Q8IVH2 680 aaPredicted RBP13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 RILPQ96NA2 401 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 RMI1Q9H9A7 625 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 SCINQ9Y6U3 715 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 DYTNA2CJ06 578 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 TPP2P29144 1249 aaPredicted RBP13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 PCYT1AP49585 367 aa13.07□□□□□ -0.32
TSPAN9-201ENST00000011898 GFPT1Q06210 699 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms