RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 SPATA32Q96LK8 384 aa13.43□□□□□ -0.26
SYPL1-201ENST00000011473 PCDHA7Q9UN72 937 aa13.43□□□□□ -0.26
SYPL1-201ENST00000011473 CEP290O15078 2479 aa13.43□□□□□ -0.26
SYPL1-201ENST00000011473 SMIM35A0A1B0GVV1 85 aa13.43□□□□□ -0.26
SYPL1-201ENST00000011473 RSPH10B2B2RC85 870 aa13.43□□□□□ -0.26
SYPL1-201ENST00000011473 CHRNA1P02708 482 aa13.43□□□□□ -0.26
SYPL1-201ENST00000011473 RSPH10BP0C881 870 aa13.43□□□□□ -0.26
SYPL1-201ENST00000011473 GPNMBQ14956 572 aa13.43□□□□□ -0.26
SYPL1-201ENST00000011473 KIZQ2M2Z5 673 aa13.43□□□□□ -0.26
SYPL1-201ENST00000011473 ATL3Q6DD88 541 aa13.43□□□□□ -0.26
SYPL1-201ENST00000011473 CCDC155Q8N6L0 562 aa13.43□□□□□ -0.26
SYPL1-201ENST00000011473 KCNG4Q8TDN1 519 aa13.43□□□□□ -0.26
SYPL1-201ENST00000011473 CDK5RAP3Q96JB5 506 aa13.43□□□□□ -0.26
SYPL1-201ENST00000011473 DHX33Q9H6R0 707 aaKnown RBP13.43□□□□□ -0.26
SYPL1-201ENST00000011473 CDHR5Q9HBB8 845 aa13.43□□□□□ -0.26
SYPL1-201ENST00000011473 RCOR1Q9UKL0 485 aa13.43□□□□□ -0.26
SYPL1-201ENST00000011473 AKT3Q9Y243 479 aa13.43□□□□□ -0.26
SYPL1-201ENST00000011473 TRIP12Q14669 1992 aaPredicted RBP13.43□□□□□ -0.26
SYPL1-201ENST00000011473 MAGEB2O15479 319 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 NBNO60934 754 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 MAFO75444 373 aaPredicted RBP13.42□□□□□ -0.26
SYPL1-201ENST00000011473 PLCG1P19174 1290 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 AXDND1Q5T1B0 1012 aaPredicted RBP13.42□□□□□ -0.26
SYPL1-201ENST00000011473 SHC4Q6S5L8 630 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 CHRDL2Q6WN34 429 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 KSR1Q8IVT5 923 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 TMEM199Q8N511 208 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 LINC01465Q8N7H1 131 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 VWCEQ96DN2 955 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 GPRC5CQ9NQ84 441 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 XPNPEP1Q9NQW7 623 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 ANKEF1Q9NU02 776 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 CDY2AQ9Y6F7 541 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 MYH15Q9Y2K3 1946 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 MYH9P35579 1960 aaKnown RBP13.42□□□□□ -0.26
SYPL1-201ENST00000011473 A0A087X0B3 334 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 IGKV6-21A0A0C4DH24 114 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 ARHGEF35A5YM69 484 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 SSBP05455 408 aaKnown RBP eCLIP13.42□□□□□ -0.26
SYPL1-201ENST00000011473 FPGSQ05932 587 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 RBL2Q08999 1139 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 DHX8Q14562 1220 aaKnown RBP13.42□□□□□ -0.26
SYPL1-201ENST00000011473 EMC2Q15006 297 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 PDILTQ8N807 584 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 CHMP5Q9NZZ3 219 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 CIZ1Q9ULV3 898 aaPredicted RBP13.42□□□□□ -0.26
SYPL1-201ENST00000011473 DNM3Q9UQ16 869 aa13.42□□□□□ -0.26
SYPL1-201ENST00000011473 KDM3AQ9Y4C1 1321 aa13.41□□□□□ -0.26
SYPL1-201ENST00000011473 CDH23Q9H251 3354 aa13.41□□□□□ -0.26
SYPL1-201ENST00000011473 TMOD1P28289 359 aa13.41□□□□□ -0.26
SYPL1-201ENST00000011473 MRPS6P82932 125 aaKnown RBP13.41□□□□□ -0.26
SYPL1-201ENST00000011473 MGAT3Q09327 533 aa13.41□□□□□ -0.26
SYPL1-201ENST00000011473 RAD51AP2Q09MP3 1159 aa13.41□□□□□ -0.26
SYPL1-201ENST00000011473 TMEM119Q4V9L6 283 aa13.41□□□□□ -0.26
SYPL1-201ENST00000011473 HYIQ5T013 277 aa13.41□□□□□ -0.26
SYPL1-201ENST00000011473 PADI6Q6TGC4 694 aa13.41□□□□□ -0.26
SYPL1-201ENST00000011473 C16orf59Q7L2K0 433 aa13.41□□□□□ -0.26
SYPL1-201ENST00000011473 RSPH3Q86UC2 560 aa13.41□□□□□ -0.26
SYPL1-201ENST00000011473 RHPN2Q8IUC4 686 aa13.41□□□□□ -0.26
SYPL1-201ENST00000011473 CALML4Q96GE6 196 aa13.41□□□□□ -0.26
SYPL1-201ENST00000011473 OSMRQ99650 979 aa13.41□□□□□ -0.26
SYPL1-201ENST00000011473 GDF15Q99988 308 aa13.41□□□□□ -0.26
SYPL1-201ENST00000011473 SUCLA2Q9P2R7 463 aaPredicted RBP13.41□□□□□ -0.26
SYPL1-201ENST00000011473 DBR1Q9UK59 544 aaKnown RBP13.41□□□□□ -0.26
SYPL1-201ENST00000011473 STK24Q9Y6E0 443 aa13.41□□□□□ -0.26
SYPL1-201ENST00000011473 MORC2Q9Y6X9 1032 aaPredicted RBP13.41□□□□□ -0.26
SYPL1-201ENST00000011473 WDR81Q562E7 1941 aa13.41□□□□□ -0.26
SYPL1-201ENST00000011473 SZT2Q5T011 3432 aa13.41□□□□□ -0.26
SYPL1-201ENST00000011473 CSDE1O75534 798 aaKnown RBP13.4□□□□□ -0.26
SYPL1-201ENST00000011473 GHRP10912 638 aa13.4□□□□□ -0.26
SYPL1-201ENST00000011473 NLRP11P59045 1033 aaKnown RBP13.4□□□□□ -0.26
SYPL1-201ENST00000011473 TMEM40Q8WWA1 233 aa13.4□□□□□ -0.26
SYPL1-201ENST00000011473 MAP7D2Q96T17 732 aa13.4□□□□□ -0.26
SYPL1-201ENST00000011473 MTRQ99707 1265 aa13.4□□□□□ -0.26
SYPL1-201ENST00000011473 RUSC1Q9BVN2 902 aa13.4□□□□□ -0.26
SYPL1-201ENST00000011473 CCSER1Q9C0I3 900 aa13.4□□□□□ -0.26
SYPL1-201ENST00000011473 NT5C3AQ9H0P0 336 aa13.4□□□□□ -0.26
SYPL1-201ENST00000011473 LTBP2Q14767 1821 aa13.4□□□□□ -0.26
SYPL1-201ENST00000011473 CUTAO60888 179 aa13.4□□□□□ -0.26
SYPL1-201ENST00000011473 DGAT1O75907 488 aa13.4□□□□□ -0.26
SYPL1-201ENST00000011473 EYA4O95677 639 aa13.4□□□□□ -0.26
SYPL1-201ENST00000011473 XRCC6P12956 609 aaKnown RBP eCLIP13.4□□□□□ -0.26
SYPL1-201ENST00000011473 MUTP22033 750 aa13.4□□□□□ -0.26
SYPL1-201ENST00000011473 RFC5P40937 340 aa13.4□□□□□ -0.26
SYPL1-201ENST00000011473 TCTN1Q2MV58 587 aa13.4□□□□□ -0.26
SYPL1-201ENST00000011473 C9orf50Q5SZB4 431 aa13.4□□□□□ -0.26
SYPL1-201ENST00000011473 IER5Q5VY09 327 aa13.4□□□□□ -0.26
SYPL1-201ENST00000011473 OTOP2Q7RTS6 562 aa13.4□□□□□ -0.26
SYPL1-201ENST00000011473 RPAINQ86UA6 219 aa13.4□□□□□ -0.26
SYPL1-201ENST00000011473 NLRP4Q96MN2 994 aa13.4□□□□□ -0.26
SYPL1-201ENST00000011473 UBE2OQ9C0C9 1292 aaKnown RBP13.4□□□□□ -0.26
SYPL1-201ENST00000011473 SCAND2PQ9GZW5 306 aaPredicted RBP13.4□□□□□ -0.26
SYPL1-201ENST00000011473 ATP6V0A4Q9HBG4 840 aa13.4□□□□□ -0.26
SYPL1-201ENST00000011473 BLOC1S4Q9NUP1 217 aa13.4□□□□□ -0.26
SYPL1-201ENST00000011473 M0QZ92 97 aa13.39□□□□□ -0.27
SYPL1-201ENST00000011473 GPR32O75388 356 aa13.39□□□□□ -0.27
SYPL1-201ENST00000011473 PLA2G4BP0C869 781 aa13.39□□□□□ -0.27
SYPL1-201ENST00000011473 TXLNAP40222 546 aa13.39□□□□□ -0.27
SYPL1-201ENST00000011473 CACNB1Q02641 598 aaPredicted RBP13.39□□□□□ -0.27
SYPL1-201ENST00000011473 PRPF31Q8WWY3 499 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms