RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 R3hcc1Q8BSI6 488 aa9.72□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Pms1Q8K119 917 aa9.72□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 F11Q91Y47 624 aa9.72□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Dhx30Q99PU8 1217 aaKnown RBP9.72□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Mrpl44Q9CY73 333 aaKnown RBP9.72□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 TarsQ9D0R2 722 aaKnown RBP9.72□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Eif4e3Q9DBB5 207 aa9.72□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Tmem47Q9JJG6 181 aa9.72□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Grb14Q9JLM9 538 aa9.72□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Azi2Q9QYP6 405 aa9.72□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Gm45861A0A1B0GRY3 1923 aa9.72□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Itpr1P11881 2749 aa9.71□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Dock5B2RY04 1868 aa9.71□□□□□ -0.85
Pdlim5-209ENSMUST00000196908 Gm7086A0A1W2P766 342 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Zscan25B2RX31 543 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Xpnpep3B7ZMP1 506 aaKnown RBP9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Maml3D4QGC2 1135 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Vmn2r23E9PXI5 849 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 PrkcshO08795 521 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Cyp27b1O35084 507 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Hoxb8P09632 243 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Hoxa11P31311 313 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Tulp2P46686 562 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Pla2g2cP48076 150 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 LmnaP48678 665 aaKnown RBP9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Cct2P80314 535 aaKnown RBP9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Dab2P98078 766 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Cnnm3Q32NY4 713 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Cep63Q3UPP8 700 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Ubash3aQ3V3E1 624 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Hand2Q61039 217 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 C6.1alQ7M757 291 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Lats2Q7TSJ6 1042 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Rnf214Q8BFU3 668 aaKnown RBP9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Npas4Q8BGD7 802 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 DlatQ8BMF4 642 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Gpr158Q8C419 1200 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 NeproQ8R2U2 564 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Rufy2Q8R4C2 606 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Pcdhb22Q91XZ8 794 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Nrbp1Q99J45 535 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Pramel1Q99MW3 458 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Ndufa8Q9DCJ5 172 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Pold3Q9EQ28 462 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Krt85Q9Z2T6 507 aa9.71□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Gm30191A0A0U1RNT7 187 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 C87977A2A958 498 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Mllt3A2AM29 569 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Casp12O08736 419 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Mtco1P00397 514 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Mx1P09922 631 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Pik3r1P26450 724 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Cyp2f2P33267 491 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Oog4Q4G0C7 502 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Usp28Q5I043 1051 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Rgl1Q60695 768 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 ChpfQ6IQX7 774 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Inppl1Q6P549 1257 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Lrsam1Q80ZI6 727 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Atg4cQ811C2 458 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 AarsQ8BGQ7 968 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Bnc2Q8BMQ3 1127 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Yars2Q8BYL4 472 aaKnown RBP9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 VcpkmtQ8C436 228 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 RydenQ8CAK3 290 aaKnown RBP9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Bcas3Q8CCN5 928 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Mtmr3Q8K296 1196 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Alg3Q8K2A8 438 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Tbc1d13Q8R3D1 400 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Cnot6lQ8VEG6 555 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Chd1lQ9CXF7 900 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Ush1cQ9ES64 910 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Tmod3Q9JHJ0 352 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 ArcQ9WV31 396 aa9.7□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Cyp4a29A0A087WPC3 509 aa9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Oip5A2AQ14 241 aa9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 KalrnA2CG49 2964 aa9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Cyp3a59D3Z2W7 503 aa9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 LctF8VPT3 1931 aa9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Lrrc4bP0C192 709 aa9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Cd86P42082 309 aa9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 EdnrbP48302 442 aa9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Siah1bQ06985 282 aa9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Plpp4Q0VBU9 271 aa9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Ccdc162pQ0VG85 912 aa9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 FcgrtQ61559 365 aa9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Daam2Q80U19 1115 aa9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Pi15Q8BS03 258 aa9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Depdc1aQ8CIG0 804 aa9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Art3Q8R2G4 371 aa9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Eaf2Q91ZD6 262 aa9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Nxf1Q99JX7 618 aaKnown RBP9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Atoh8Q99NA2 322 aa9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Mrpl11Q9CQF0 192 aaKnown RBP9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Odf2lQ9D478 642 aa9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Ccdc105Q9D4K7 499 aa9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Ubiad1Q9DC60 336 aa9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Pes1Q9EQ61 584 aaKnown RBP9.69□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 Sbf2E9PXF8 1872 aa9.68□□□□□ -0.86
Pdlim5-209ENSMUST00000196908 KcpQ3U492 1550 aa9.68□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms