RNA–Protein interactions for RNA: ENSMUST00000132214.7

Ccdc38-203, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc38, Length 2,222 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-203ENSMUST00000132214 Col1a2Q01149 1372 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Zw10O54692 779 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Best1O88870 551 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Gadd45bP22339 160 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Aqp8P56404 261 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Tmem184cQ3TPR7 525 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Cyp2c67Q569X9 491 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 CoilQ5SU73 570 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Adam1aQ60813 791 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Sestd1Q80UK0 696 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Vipas39Q8BGQ1 491 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Aldh8a1Q8BH00 487 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Azin2Q8BVM4 459 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Lmcd1Q8VEE1 365 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Eva1aQ91WM6 156 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Ubxn1Q922Y1 297 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 KynuQ9CXF0 464 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Ndc80Q9D0F1 642 aaKnown RBP7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 MicalclQ9D5U9 680 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Pdzd9Q9D9M4 266 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Hip1rQ9JKY5 1068 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 PdcQ9QW08 244 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Tnip1Q9WUU8 647 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Kcnh3Q9WVJ0 1095 aa7.07□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Fbf1A2A870 1173 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Gm13023A2A8N2 498 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Gm13030A2APQ6 143 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Ccdc144bE9PVZ3 520 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Pde8aO88502 823 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 DesP31001 469 aaKnown RBP7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Cct8P42932 548 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Zdhhc9P59268 364 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Cct6aP80317 531 aaKnown RBP7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Tp53i13Q5F267 385 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 SpdyaQ5IBH7 310 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 TrhQ62361 256 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Panx2Q6IMP4 677 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Jmjd4Q8BFT6 427 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Acbd3Q8BMP6 525 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Maats1Q8BRC6 783 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Q8C1R3 189 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Ints4Q8CIM8 964 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Ppp1r42Q8R1Z4 357 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Taf1dQ9D4V4 322 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Ccdc7Q9D541 371 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Sil1Q9EPK6 465 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Adam11Q9R1V4 773 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 PappaQ8R4K8 1624 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 BcorQ8CGN4 1759 aa7.06□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Crb1Q8VHS2 1405 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Gbp6A0A0G2JDV3 611 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Atg4a-psA0A0G2JFS9 396 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Cnksr1A2A9K7 700 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Rsrc2A2RTL5 376 aaKnown RBP7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Slc9a3G3X939 829 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Gm43302L7N1X8 611 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Akap2O54931 893 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Tuba1bP05213 451 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Pde11aP0C1Q2 933 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Tuba1aP68369 451 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 G3bp2P97379 482 aaKnown RBP7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Gm1604bQ3TRG0 118 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Wbp4Q61048 376 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 CcnhQ61458 323 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Lrrc8aQ80WG5 810 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Atg4aQ8C9S8 396 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 LgsnQ8CIX8 563 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Nat10Q8K224 1024 aaKnown RBP7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Bud13Q8R149 637 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Gbp7Q91Z40 638 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Slc10a6Q9CXB2 373 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Ripk3Q9QZL0 486 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Deaf1Q9Z1T5 566 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Gm45015A0A140LII9 184 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 A0A1W2P7S8 802 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Ccdc170D3YXL0 722 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Zfp780bE9Q2S6 806 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Zfp358E9Q8M1 571 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Gm10251J3QPM5 127 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Barx2O08686 283 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Ncam1P13595 1115 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Atxn10P28658 475 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Pik3caP42337 1068 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Pcbp4P57724 403 aaKnown RBP7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Mesp1P97309 243 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Nfe2Q07279 373 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Slain1Q68FF7 579 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Kansl1Q80TG1 1036 aaKnown RBP7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Usp6nlQ80XC3 819 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Tmcc3Q8R310 477 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 GcshQ91WK5 170 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 GckrQ91X44 587 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Basp1Q91XV3 226 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Mrpl1Q99N96 336 aaKnown RBP7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Ebag9Q9D0V7 213 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Ascc1Q9D8Z1 356 aaKnown RBP7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Gm2916Q9D9B9 127 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Dkk3Q9QUN9 349 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Nphp1Q9QY53 687 aa7.05□□□□□ -1.28
Ccdc38-203ENSMUST00000132214 Mta2Q9R190 668 aa7.05□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 39.8 ms