RNA–Protein interactions for RNA: ENSMUST00000100064.8

Scn9a-202, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Scn9a, Length 9,840 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-202ENSMUST00000100064 Cnbd2Q9D5U8 673 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Tigd5Q499M4 642 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Ccdc84Q4VA36 332 aaKnown RBP11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Rbbp7Q60973 425 aaKnown RBP11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Tll1Q62381 1013 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 XpaQ64267 272 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Slc26a6Q8CIW6 758 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Ddah1Q9CWS0 285 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 RalbQ9JIW9 206 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Wdr46Q9Z0H1 622 aaKnown RBP11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Arhgap42B2RQE8 841 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 A530032D15RikE9Q422 215 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Rad23aP54726 363 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Kpna1Q60960 538 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Aldh1a2Q62148 518 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Ano4Q8C5H1 955 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Ccdc159Q8C963 411 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Krt222Q8CCX5 294 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Tmem119Q8R138 280 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Eps8l1Q8R5F8 716 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Rnf31Q924T7 1066 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 TnrQ8BYI9 1358 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Gm29133A0A1B0GT72 266 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Kif23E9Q5G3 953 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Cyp2e1Q05421 493 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Drp2Q05AA6 957 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Adck2Q6NSR3 617 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Ttc27Q8CD92 847 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Bmp2kQ91Z96 1138 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Cog8Q9JJA2 640 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Nr2e3Q9QXZ7 395 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Lipo1J3QME6 396 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Upf3bQ3ULL6 472 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Mapre1Q61166 268 aaKnown RBP11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Sept8Q8CHH9 429 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Sytl1Q99N80 567 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Serpina9Q9D7D2 418 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 SmapQ9R0P4 181 aaKnown RBP11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Hmgb3O54879 200 aaKnown RBP11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Mup5P11591 180 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Ddx49Q4FZF3 480 aaKnown RBP11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Kcna4Q61423 654 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Ccdc15Q8C9M2 810 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Lmbrd1Q8K0B2 537 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Ppp6r2Q8R3Q2 923 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Gstt4Q9D4P7 240 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Adcy9P51830 1353 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Kdm3bQ6ZPY7 1562 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Cyp2c23E9Q5K4 494 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Cd86P42082 309 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Cyp11b1Q3TG86 501 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Atp1a3Q6PIC6 1013 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Cwf19l2Q8BG79 887 aaKnown RBP11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Cacnb1Q8R3Z5 597 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Ppp6r3Q922D4 844 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 MlxiplQ99MZ3 864 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Ndel1Q9ERR1 345 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Cd19P25918 547 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Serpina3mQ03734 418 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 C2cd5Q7TPS5 1016 aaKnown RBP11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Pum3Q8BKS9 647 aaKnown RBP11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Csgalnact2Q8C1F4 542 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Bbs7Q8K2G4 715 aa11.11□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Top3aO70157 1003 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 S100gP97816 79 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Slc7a14Q8BXR1 771 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Ttc22Q8C159 568 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Gpr108Q91WD0 569 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 GhdcQ99J23 532 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Slc13a1Q9JHI4 594 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 XlrP05531 208 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Zfyve27Q3TXX3 415 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Fam8a1Q3URQ4 399 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Fam161bQ8CB59 589 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Arhgap29Q8CGF1 1266 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Fads3Q9JJE7 449 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Msh6P54276 1358 aaKnown RBP11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Ttc30a2A2AKQ8 664 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Atxn10P28658 475 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Stat3P42227 770 aaKnown RBP11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Nr1d1Q3UV55 615 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 CoilQ5SU73 570 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Itih1Q61702 907 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Dhx32Q8BZS9 744 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Ttc30a1Q99J38 664 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Ttc30bQ9CY00 664 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Rgs3Q9DC04 966 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Sh3bp1P55194 680 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 S100a5P63084 93 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Acot5Q6Q2Z6 421 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Ppp1r12bQ8BG95 976 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Dynll2Q9D0M5 89 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Tm6sf1P58749 370 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Tubgcp3P58854 905 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 SpertQ32MG2 446 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Atp13a1Q9EPE9 1200 aaKnown RBP11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Ncapd2Q8K2Z4 1392 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Pabpc1lA2A5N3 607 aaKnown RBP11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Cacnb3P54285 484 aa11.1□□□□□ -0.63
Scn9a-202ENSMUST00000100064 Sorbs1Q62417 1290 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms