RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Sdf4Q61112 361 aa15.76■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Ppp2r2aQ6P1F6 447 aa15.76■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 LdhdQ7TNG8 484 aa15.76■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Taco1Q8K0Z7 294 aaKnown RBP15.76■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 MybP06876 636 aa15.76■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Hps5P59438 1126 aa15.76■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Znf148Q61624 794 aa15.76■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Baiap3Q80TT2 1134 aa15.76■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Fam160b1Q8CDM8 764 aa15.76■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Zc3h4Q6ZPZ3 1304 aaKnown RBP15.76■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Upf3bQ3ULL6 472 aa15.76■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Zfp956Q3UZY6 572 aa15.76■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Lrig2Q52KR2 1054 aa15.76■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 PighQ5M9N4 188 aa15.76■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Supt20hQ7TT00 530 aaKnown RBP15.76■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Ccz1Q8C1Y8 480 aa15.76■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Trim59Q922Y2 403 aa15.76■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Vmn2r23E9PXI5 849 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Gm2237E9Q501 211 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Gm3591K7N6X2 186 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Nsun7Q14AW5 724 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Gpr162Q3UN16 588 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Fbxo44Q8BK26 255 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Rps6kc1Q8BLK9 1056 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Morc4Q8BMD7 928 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Ephb1Q8CBF3 984 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Fgfr1op2Q9CRA9 253 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Magi2Q9WVQ1 1275 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Setd4P58467 439 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 StamP70297 548 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Gm13103Q4VAD2 491 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 CrkQ64010 304 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Zfp341Q6PGC9 846 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Fgd4Q91ZT5 766 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Snf8Q9CZ28 258 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Top3aO70157 1003 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Dclk2Q6PGN3 756 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Ric8bQ80XE1 520 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Champ1Q8K327 802 aaKnown RBP15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Thap2Q9D305 217 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Tgm5Q9D7I9 724 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Zmynd8A2A484 1235 aaKnown RBP15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Erich2E9Q1A6 463 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Spag6Q3V0U9 509 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 CpQ61147 1061 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Sh3tc2Q80VA5 1289 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Morc2bQ8C5W4 1022 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Apol9bQ8C7I4 310 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Q8CEZ4 452 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Tada3Q8R0L9 432 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Apol9aQ8VDU3 310 aa15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Wdr46Q9Z0H1 622 aaKnown RBP15.75■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Gm36028A0A0U1RPM1 299 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 LmnaP48678 665 aaKnown RBP15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Vmn1r209Q5NC97 312 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Ppp1r37Q8BKR5 712 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Gm15262A0A140LIQ5 728 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 ErmardE9Q048 622 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Soat2O88908 525 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Tpp1O89023 562 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Aco1P28271 889 aaKnown RBP15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Grin1P35438 938 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Nlrp4eQ66X19 978 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Papd5Q68ED3 633 aaKnown RBP15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Tlr13Q6R5N8 991 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Fnbp1Q80TY0 616 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Rhot1Q8BG51 631 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Arid5bQ8BM75 1188 aaKnown RBP15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Ccdc159Q8C963 411 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Vps39Q8R5L3 886 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Scrn2Q8VCA8 425 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Trim16Q99PP9 556 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 DtnaQ9D2N4 746 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Cpb2Q9JHH6 422 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Adrm1Q9JKV1 407 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Ccdc24E9PUW8 296 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 AK157302I3ITR1 129 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Edem3Q2HXL6 931 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Apol7eQ3UZ24 369 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Zbtb17Q60821 794 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Arhgap30Q640N3 1101 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Ino80dQ66JY2 873 aaKnown RBP15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Dync1li2Q6PDL0 492 aaKnown RBP15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Dpp9Q8BVG4 862 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Hdac11Q91WA3 347 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Ces1fQ91WU0 561 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Cmtm5Q9D6G9 156 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Isca1Q9D924 129 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Plcg1Q62077 1302 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Lrrc63A6H694 637 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Krt1P04104 637 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Lrch1P62046 709 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Q3TQQ9 903 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Tbc1d1Q60949 1255 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Mtmr10Q7TPM9 771 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Tmem132cQ8CEF9 1099 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Extl3Q9WVL6 918 aa15.74■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 G3bp2P97379 482 aaKnown RBP15.73■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Psmd5Q8BJY1 504 aa15.73■□□□□ 0.11
Pcdh20-201ENSMUST00000061628 Chmp2aQ9DB34 222 aa15.73■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms