RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Grin3aA2AIR5 1135 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Btbd35f9A2BFZ7 498 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Btbd35f7A2BHG6 498 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Btbd35f19A2CG71 498 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Btbd35f10A2CG92 498 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Btbd35f3A2CGC2 496 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Btbd35f2J3QMS5 498 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Btbd35f25J3QMV9 498 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Btbd35f6J3QMW9 498 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Btbd35f26J3QNK2 498 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Btbd35f24J3QNQ5 498 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Btbd35f8J3QQ50 498 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Btbd35f17L7MU81 498 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Btbd35f18L7MU83 498 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Kcnh2O35219 1162 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Il13ra2O88786 383 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Hspa1lP16627 641 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Llgl2Q3TJ91 1027 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Naf1Q3UMQ8 489 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Btbd35f27Q5FWA1 498 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Clhc1Q5M6W3 596 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Map3k10Q66L42 940 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Lca5Q80ST9 704 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Elmo3Q8BYZ7 720 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Mtmr6Q8VE11 617 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Uba5Q8VE47 403 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Sec63Q8VHE0 760 aaKnown RBP9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Mlc1Q8VHK5 382 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gnl2Q99LH1 728 aaKnown RBP9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 GMCL1P1Q99N64 498 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Coa3Q9D2R6 108 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Map3k6Q9WTR2 1291 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 SynrgQ5SV85 1306 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 AU019823E9PUQ3 292 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 DgkkE9Q7N4 1118 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 4930430A15RikQ05AC5 485 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 LpoQ5SW46 710 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Spata7Q80VP2 582 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Tti2Q8BGV4 512 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Epc1Q8C9X6 813 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Pih1d1Q9CQJ2 290 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Bmp10Q9R229 421 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Btbd35f28A2CFD5 498 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gimd1E9PW74 217 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Btbd35f30J3QML3 498 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Clcn6O35454 870 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Sema3gQ4LFA9 780 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 PrkciQ62074 595 aaKnown RBP9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Lrrc45Q8CIM1 670 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Msantd3Q9CR78 275 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ncf2O70145 525 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Trim80Q3V061 624 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 PoliQ6R3M4 717 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ifi27Q8C6G0 260 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gtf2h3Q8VD76 309 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Eif4a3Q91VC3 411 aaKnown RBP9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Bzw2Q91VK1 419 aaKnown RBP9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Rtfdc1Q99K95 307 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Q9CQF4 240 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gpn3Q9D3W4 284 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 2200002D01RikQ9D809 114 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ap1s2Q9DB50 160 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Nif3l1Q9EQ80 376 aa9.6□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Gm36028A0A0U1RPM1 299 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ccdc144bE9PVZ3 520 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Snap23O09044 210 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Zw10O54692 779 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Stx8O88983 236 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Pla2g4aP47713 748 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Cwc27Q3TKY6 469 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Otud5Q3U2S4 566 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Znf148Q61624 794 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ints3Q7TPD0 1041 aaKnown RBP9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Nol11Q8BJW5 723 aaKnown RBP9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Cabs1Q8C633 391 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ushbp1Q8R370 680 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ifih1Q8R5F7 1025 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Krt5Q922U2 580 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Sapcd2Q9D818 391 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 GsdmaQ9EST1 446 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 RhagQ9QUT0 438 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Trip4Q9QXN3 581 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Cyp2c68K7N6C2 491 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ppargc1aO70343 797 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Men1O88559 611 aaKnown RBP9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Dnm2P39054 870 aaKnown RBP9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Faf1P54731 649 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Rsph3aQ3UFY4 516 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Cog7Q3UM29 770 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Srek1ip1Q4V9W2 153 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ifnl2Q4VK74 193 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Jph4Q80WT0 628 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Ccdc50Q810U5 305 aaKnown RBP9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Dyrk4Q8BI55 632 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Nrif1Q923B3 828 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 TarsQ9D0R2 722 aaKnown RBP9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Tmed10Q9D1D4 219 aaKnown RBP9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Mbtps1Q9WTZ2 1052 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 NuggcD3YWJ0 796 aa9.59□□□□□ -0.87
Clcn3-202ENSMUST00000056508 Pcdh10E9PXQ7 1057 aa9.59□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 50.7 ms