RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Tgs1Q923W1 853 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Iqcf1Q9D9K8 182 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 BC005561E9Q5E2 1589 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Akr1b1P45376 316 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Rrp1bQ91YK2 724 aaKnown RBP16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Gpaa1Q9WTK3 621 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Kdm5aQ3UXZ9 1690 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Mroh8E9PYI4 1049 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 LdhbP16125 334 aaKnown RBP16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Haus3Q8QZX2 570 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Rbm31yQ9D3U4 565 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Olfr552E9Q545 317 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Dpcr1Q3TNW5 500 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Lrch2Q3UMG5 773 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Nab2Q61127 525 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Slc6a15Q8BG16 729 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Phkg2Q9DB30 406 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Kcnb2A6H8H5 907 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Gm379J3QQ19 296 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Serpinb9O08797 374 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 LtkP08923 888 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Serpinb3bQ9D1Q5 387 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Vmn2r68L7N2B3 851 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Tom1O88746 492 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Arl4cP61208 192 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Ptk2bQ9QVP9 1009 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Frmpd1A2AKB4 1549 aa16.7■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Ifnl2Q4VK74 193 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Itih1Q61702 907 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Kcns3Q8BQZ8 491 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 CenpaO35216 134 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 TfrcQ62351 763 aaKnown RBP16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Irak1Q62406 710 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Baiap3Q80TT2 1134 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Olfml3Q8BK62 406 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Zbtb7aO88939 569 aaKnown RBP16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Eif2ak1Q9Z2R9 619 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 TriqkB2B9E1 86 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Kif1cO35071 1100 aaKnown RBP16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Psmc3O88685 442 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 E2f8Q58FA4 860 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Ces3aQ63880 571 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Asap2Q7SIG6 958 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Galnt5Q8C102 930 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Ces3bQ8VCU1 571 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Sh3bp5lQ99LH9 392 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Klhl34A2AI76 644 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Card9A2AIV8 536 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Prl3b1P09586 222 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Kcna3P16390 528 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Fam178bQ24JP3 464 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 NelfcdQ922L6 591 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Anks1aP59672 1150 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Nme8Q715T0 586 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Asic4Q7TNS7 539 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Kcnv2Q8CFS6 562 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Adcy9P51830 1353 aa16.69■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Lmnb1P14733 588 aaKnown RBP16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Exosc10P56960 887 aaKnown RBP16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 RimklbQ80WS1 387 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Ubap1Q8BH48 502 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 1700016D06RikQ9DAA5 166 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Gcc2Q8CHG3 1679 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Syde2E9PUP1 1314 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Asxl2Q8BZ32 1370 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Serpina1bP22599 413 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Ece1Q4PZA2 769 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Bbs7Q8K2G4 715 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Art3Q8R2G4 371 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Atp11cQ9QZW0 1129 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Zc3h4Q6ZPZ3 1304 aaKnown RBP16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Rbm46P86049 533 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Tmcc1Q69ZZ6 649 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Impg2Q80XH2 1243 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 EpgnQ924X1 152 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 IkbkbO88351 757 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 S100a9P31725 113 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Snap25P60879 206 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 2900092C05RikQ5I0V9 184 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Bfsp2Q6NVD9 416 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Lrrc59Q922Q8 307 aaKnown RBP16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 CrklP47941 303 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Spire2Q8K1S6 718 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Gps1Q99LD4 471 aaKnown RBP16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Abcb5B5X0E4 1255 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Gucy2cQ3UWA6 1072 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Cyfip2Q5SQX6 1253 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Ksr1Q61097 873 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Cul3Q9JLV5 768 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 VmacQ8BP01 174 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 GsdmeQ9Z2D3 512 aa16.68■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Tex14Q7M6U3 1450 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Foxred2Q3USW5 665 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Olfm4Q3UZZ4 505 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Prpf6Q91YR7 941 aaKnown RBP16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Rabgap1lA6H6A9 815 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Stxbp5Q8K400 1152 aaKnown RBP16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Cpb2Q9JHH6 422 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Npc1l1Q6T3U4 1333 aa16.67■□□□□ 0.26
Ubr3-201ENSMUST00000055758 Myh2G3UW82 1942 aa16.67■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms