RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Vmn2r78K7N6U5 853 aa12.71□□□□□ -0.37
Trim56-201ENSMUST00000054384 Trim72Q1XH17 477 aa12.71□□□□□ -0.37
Trim56-201ENSMUST00000054384 Mapk6Q61532 720 aa12.71□□□□□ -0.37
Trim56-201ENSMUST00000054384 DbnlQ62418 436 aa12.71□□□□□ -0.37
Trim56-201ENSMUST00000054384 Rccd1Q8BTU7 377 aa12.71□□□□□ -0.37
Trim56-201ENSMUST00000054384 Med21Q9CQ39 144 aa12.71□□□□□ -0.37
Trim56-201ENSMUST00000054384 Txndc9Q9CQ79 226 aa12.71□□□□□ -0.37
Trim56-201ENSMUST00000054384 Trpc5Q9QX29 975 aa12.71□□□□□ -0.37
Trim56-201ENSMUST00000054384 AdalQ80SY6 360 aa12.71□□□□□ -0.37
Trim56-201ENSMUST00000054384 FtoQ8BGW1 502 aa12.71□□□□□ -0.37
Trim56-201ENSMUST00000054384 Krt75Q8BGZ7 551 aa12.71□□□□□ -0.37
Trim56-201ENSMUST00000054384 Polr3eQ9CZT4 710 aa12.71□□□□□ -0.37
Trim56-201ENSMUST00000054384 Deaf1Q9Z1T5 566 aa12.71□□□□□ -0.37
Trim56-201ENSMUST00000054384 Nup160Q9Z0W3 1402 aaKnown RBP12.71□□□□□ -0.37
Trim56-201ENSMUST00000054384 Cyp4f40G3UW81 524 aa12.71□□□□□ -0.37
Trim56-201ENSMUST00000054384 Vps4bP46467 444 aaKnown RBP12.71□□□□□ -0.37
Trim56-201ENSMUST00000054384 LrmpQ60664 539 aa12.71□□□□□ -0.37
Trim56-201ENSMUST00000054384 Popdc2Q9ES82 367 aa12.71□□□□□ -0.37
Trim56-201ENSMUST00000054384 Olfr310B2RVZ1 332 aa12.71□□□□□ -0.38
Trim56-201ENSMUST00000054384 Unc5clQ6R653 518 aa12.71□□□□□ -0.38
Trim56-201ENSMUST00000054384 Rgs12Q8CGE9 1381 aa12.71□□□□□ -0.38
Trim56-201ENSMUST00000054384 Myo1dQ5SYD0 1006 aa12.71□□□□□ -0.38
Trim56-201ENSMUST00000054384 Pcdhb9E9Q5G2 828 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Pla2g4aP47713 748 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Znf532Q6NXK2 1036 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Wdr91Q7TMQ7 748 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Ttll4Q80UG8 1193 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Nlrp4aQ8BU40 982 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 CinpQ9D0V8 212 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 DtnaQ9D2N4 746 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Stk39Q9Z1W9 556 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 TriqkB2B9E1 86 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Gm20721E9Q2U8 318 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Nme8Q715T0 586 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Myo1cQ9WTI7 1063 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Ddx5Q61656 614 aaKnown RBP12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Ston1Q8CDJ8 730 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Gm5926E9PWJ8 236 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Pms2P54279 859 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Sash1P59808 1230 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Ints4Q8CIM8 964 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Trip10Q8CJ53 603 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Cdkl2Q9QUK0 568 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Twf2Q9Z0P5 349 aaKnown RBP12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Psma3O70435 255 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Dpcr1Q3TNW5 500 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 P3h2Q8CG71 703 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Vps37aQ8CHS8 397 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Tasp1Q8R1G1 420 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Vps39Q8R5L3 886 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Cd248Q91V98 765 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Mroh6V9GX81 722 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Dab1P97318 588 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 SpdyaQ5IBH7 310 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Ccdc85aQ5SP85 500 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 AsnsQ61024 561 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 TwistnbQ78WZ7 330 aaKnown RBP12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Pip4k2cQ91XU3 421 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Q9CR55 154 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Habp4Q9JKS5 411 aaKnown RBP12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Pcsk1nQ9QXV0 258 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Disp3A3KFU9 1347 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Uggt2E9Q4X2 1504 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Pde8bE9Q4S1 865 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Gm8897L7N294 181 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Glra4Q61603 456 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Dmc1Q61880 340 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Tp53bp2Q8CG79 1128 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Pfdn1Q9CWM4 122 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Pole3Q9JKP7 145 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Pde6bP23440 856 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Cct7P80313 544 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 RenbpP82343 430 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Agr3Q8R3W7 165 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 NclnQ8VCM8 563 aaKnown RBP12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 Vstm4T1NXB5 319 aa12.7□□□□□ -0.38
Trim56-201ENSMUST00000054384 4930444G20RikD3Z741 495 aa12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 TpbpaP13438 124 aa12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 Q66JV7 365 aa12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 Rasgrp4Q8BTM9 673 aa12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 H6pdQ8CFX1 789 aa12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 Ppp1r16bQ8VHQ3 568 aa12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 Exoc4O35382 975 aa12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 Olfr1415Q7TQS4 311 aa12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 Cgref1Q8R1U2 281 aa12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 Olfr1416Q8VGU4 312 aa12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 Copg1Q9QZE5 874 aa12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 GdaQ9R111 454 aa12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 Bub1bQ9Z1S0 1052 aa12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 Apba1B2RUJ5 842 aa12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 Gm4871D3Z0W7 314 aa12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 Zfp846G3X996 541 aa12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 Wdr47Q8CGF6 920 aa12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 Psrc1Q9D0P7 329 aa12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 Stk11Q9WTK7 436 aa12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 PodnQ7TQ62 611 aa12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 Prpf3Q922U1 683 aaKnown RBP12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 Mrpl11Q9CQF0 192 aaKnown RBP12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 Dmrtc1Q9D9R7 182 aa12.69□□□□□ -0.38
Trim56-201ENSMUST00000054384 NvlQ9DBY8 855 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms