RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Tnnc1P19123 161 aa17.42■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Znf354cQ571J5 560 aa17.42■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Col23a1Q8K4G2 532 aa17.42■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Gtf3c5Q8R2T8 520 aa17.42■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Cbwd1Q8VEH6 393 aa17.42■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Rabl3Q9D4V7 236 aa17.42■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Fthl17aQ9DAX0 182 aa17.42■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Sclt1G5E861 688 aa17.42■□□□□ 0.38
Ckap4-201ENSMUST00000053871 ProcP33587 460 aa17.42■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Churc1Q6DG52 112 aa17.42■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Jade3Q6IE82 823 aa17.42■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Cd248Q91V98 765 aa17.42■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Mettl13Q91YR5 698 aa17.42■□□□□ 0.38
Ckap4-201ENSMUST00000053871 LrmdaQ9D9B4 229 aa17.42■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Ubiad1Q9DC60 336 aa17.42■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Gm28510A0A087WP28 240 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Ace3D0G895 737 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 CatspereP0DP43 985 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Acsbg2Q2XU92 667 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 FdxrQ61578 494 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Elmo3Q8BYZ7 720 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Nemp2Q8CB65 421 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Six6os1Q9CTN5 574 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Tlr2Q9QUN7 784 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Gap43P06837 227 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Lmnb2P21619 596 aaKnown RBP17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Cep126Q0VBV7 1103 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Znf367Q0VDT2 340 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Nr2e1Q64104 385 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Ccdc25Q78PG9 208 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Ttc22Q8C159 568 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Cyp2s1Q9DBX6 501 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Plxnb2B2RXS4 1842 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Myh10Q61879 1976 aaKnown RBP17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Lrrc38A2VDH3 298 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 E9QMW4 1145 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 NfibP97863 570 aaKnown RBP17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Ttc16Q8C1F5 767 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Ccdc87Q8CDL9 855 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 LgsnQ8CIX8 563 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 BbxQ8VBW5 907 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Bzw2Q91VK1 419 aaKnown RBP17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Anapc4Q91W96 807 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Alg1Q921Q3 482 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Extl2Q9ES89 330 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Uchl3Q9JKB1 230 aa17.41■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Ppfia4B8QI36 1187 aa17.4■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Q3TTJ4 293 aa17.4■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Tspyl5Q69ZB3 406 aa17.4■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Cct8l1Q80YT3 562 aa17.4■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Gprasp2Q8BUY8 826 aa17.4■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Ctnnbl1Q9CWL8 563 aaKnown RBP17.4■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Sf3a3Q9D554 501 aaKnown RBP17.4■□□□□ 0.38
Ckap4-201ENSMUST00000053871 SyncQ9EPM5 470 aa17.4■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Slfn14V9GXG1 899 aa17.4■□□□□ 0.38
Ckap4-201ENSMUST00000053871 C87977A2A958 498 aa17.4■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Xrcc6P23475 608 aa17.4■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Mgat1P27808 447 aa17.4■□□□□ 0.38
Ckap4-201ENSMUST00000053871 GssP51855 474 aa17.4■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Lmntd2Q0VET5 664 aa17.4■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Sin3bQ62141 1098 aa17.4■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Dr1Q91WV0 176 aa17.4■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Abcf2Q99LE6 628 aaKnown RBP17.4■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Ascc1Q9D8Z1 356 aaKnown RBP17.4■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Stk4Q9JI11 487 aa17.4■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Fam71aB7XG49 585 aa17.39■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Gsg1l2M0QWL6 290 aa17.39■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Pja1O55176 578 aa17.39■□□□□ 0.38
Ckap4-201ENSMUST00000053871 MyocO70624 490 aa17.39■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Mcf2lQ64096 1149 aa17.39■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Cypt2Q6P924 180 aa17.39■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Tas2r134Q7TQB0 298 aa17.39■□□□□ 0.38
Ckap4-201ENSMUST00000053871 AdalQ80SY6 360 aa17.39■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Zbed4Q80WQ9 1168 aa17.39■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Pdzph1Q8BGR1 1238 aa17.39■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Kat5Q8CHK4 513 aa17.39■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Pop1Q8K205 1045 aa17.39■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Reep2Q8VCD6 254 aa17.39■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Vwa5aQ99KC8 793 aaKnown RBP17.39■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Lman1Q9D0F3 517 aa17.39■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Znf354bQ9QXT9 601 aa17.39■□□□□ 0.38
Ckap4-201ENSMUST00000053871 Pagr1bF6V0H0 108 aa17.39■□□□□ 0.37
Ckap4-201ENSMUST00000053871 4930544D05RikJ3QK56 214 aa17.39■□□□□ 0.37
Ckap4-201ENSMUST00000053871 Art2aP17981 287 aa17.39■□□□□ 0.37
Ckap4-201ENSMUST00000053871 Prom2Q3UUY6 835 aa17.39■□□□□ 0.37
Ckap4-201ENSMUST00000053871 E2f5Q61502 335 aa17.39■□□□□ 0.37
Ckap4-201ENSMUST00000053871 Fam228aQ8CDW1 299 aa17.39■□□□□ 0.37
Ckap4-201ENSMUST00000053871 Pagr1aQ99L02 253 aa17.39■□□□□ 0.37
Ckap4-201ENSMUST00000053871 Prss51A0A286YDY8 319 aa17.39■□□□□ 0.37
Ckap4-201ENSMUST00000053871 Fam129cD3YZB0 591 aa17.39■□□□□ 0.37
Ckap4-201ENSMUST00000053871 Gm10110D3Z5M2 615 aa17.39■□□□□ 0.37
Ckap4-201ENSMUST00000053871 Tmod1P49813 359 aa17.39■□□□□ 0.37
Ckap4-201ENSMUST00000053871 Brd9Q3UQU0 596 aaKnown RBP17.39■□□□□ 0.37
Ckap4-201ENSMUST00000053871 Klra5Q60652 266 aa17.39■□□□□ 0.37
Ckap4-201ENSMUST00000053871 Zfp341Q6PGC9 846 aa17.39■□□□□ 0.37
Ckap4-201ENSMUST00000053871 Sestd1Q80UK0 696 aa17.39■□□□□ 0.37
Ckap4-201ENSMUST00000053871 Depdc1bQ8BH88 529 aa17.39■□□□□ 0.37
Ckap4-201ENSMUST00000053871 Kcnv2Q8CFS6 562 aa17.39■□□□□ 0.37
Ckap4-201ENSMUST00000053871 Nmrk1Q91W63 195 aa17.39■□□□□ 0.37
Ckap4-201ENSMUST00000053871 Smc6Q924W5 1097 aa17.39■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms