RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Mdm4O35618 489 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 CcnoP0C242 352 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Zdhhc9P59268 364 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Tmem260Q8BMD6 703 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Als2cr12Q8BVM7 383 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Apol10aQ8CCA5 318 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Lrrc56Q8K375 552 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 TxlnbQ8VBT1 685 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Polr3fQ921X6 316 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Ranbp17Q99NF8 1088 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Arhgef7Q9ES28 862 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Dnajb2Q9QYI5 324 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Pcdh15Q99PJ1 1943 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Pex10B1AUE5 324 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Hoxc6P10629 235 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Hoxd11P23813 323 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Stim1P70302 685 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Dennd1bQ3U1T9 766 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Arhgap1Q5FWK3 439 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Mief2Q5NCS9 454 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Ipo5Q8BKC5 1097 aaKnown RBP7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Rassf10Q8BL43 508 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Prpf31Q8CCF0 499 aaKnown RBP7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Itgbl1Q8VDV0 494 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Synpo2Q91YE8 1087 aaKnown RBP7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Baiap2l1Q9DBJ3 514 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Ltbp2O08999 1813 aa7.56□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Pramel3A2AHA7 463 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Gm7903A2AWL1 463 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Gcnt4E9Q649 455 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Nfxl1E9Q8I7 918 aaKnown RBP7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Erbb2P70424 1256 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 IqcgQ80W32 419 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Ehd2Q8BH64 543 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 DpydQ8CHR6 1025 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Usp26Q99MX1 835 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Smco2Q9DA21 347 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Trim54Q9ERP3 366 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Kntc1Q8C3Y4 2207 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Scn3aA2ASI5 1947 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Arhgef26D3YYY8 869 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 PtprcP06800 1291 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Abcb4P21440 1276 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 PklrP53657 574 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 EnahQ03173 802 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Bbof1Q3V079 533 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Fam177a1Q8BR63 207 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Q8C5S3 137 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Ftsj1Q8CBC7 324 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Zswim3Q8CFL8 695 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Adgrg2Q8CJ12 1009 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Glis1Q8K1M4 789 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Snw1Q9CSN1 536 aaKnown RBP7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 TheglQ9DA15 459 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Tle2Q9WVB2 767 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 E030030I06RikJ3QML9 246 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Mpp3O88910 568 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Ly9Q01965 654 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Kcnma1Q08460 1209 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Tgfbrap1Q3UR70 860 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Krt14Q61781 484 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Gja6Q6S5G4 283 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Arrdc3Q7TPQ9 414 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Rab11fip4Q8BQP8 635 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 RalylQ8BTF8 293 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Aldh5a1Q8BWF0 523 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Ccdc73Q8CDM4 1066 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Havcr2Q8VIM0 281 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Prpf6Q91YR7 941 aaKnown RBP7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Mettl16Q9CQG2 553 aaKnown RBP7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Yeats4Q9CR11 227 aaKnown RBP7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Rad9aQ9Z0F6 389 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Atp12aQ9Z1W8 1035 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Cyp2b23E9Q593 491 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 MafgO54790 162 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Xrcc6P23475 608 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Col9a2Q07643 688 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Ano7Q14AT5 859 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Celf6Q7TN33 460 aaKnown RBP7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Crybg3Q80W49 1005 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 PdhxQ8BKZ9 501 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Anapc4Q91W96 807 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Trpv6Q91WD2 767 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Emc2Q9CRD2 297 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 SarnpQ9D1J3 210 aaKnown RBP7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Krt17Q9QWL7 433 aa7.55□□□□□ -1.2
Bdnf-201ENSMUST00000053317 TazI7HJS2 263 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 PuraP42669 321 aaKnown RBP7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Drp2Q05AA6 957 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 PRAG1Q571I4 1179 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Cd180Q62192 661 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Dhx37Q6NZL1 1150 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Nsun6Q7TS68 476 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Ddx10Q80Y44 875 aaKnown RBP7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Eif4bQ8BGD9 611 aaKnown RBP7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Cc2d1bQ8BRN9 848 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Slc13a4Q8BZ82 625 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 AllcQ9JHX6 414 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Sgpp1Q9JI99 430 aa7.54□□□□□ -1.2
Bdnf-201ENSMUST00000053317 Dclk1Q9JLM8 756 aa7.54□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms