RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Gm6370A0A0G2JGX9 315 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Gm6309L7N481 315 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Arhgap44Q5SSM3 814 aa17.67■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Anxa9Q9JHQ0 345 aa17.66■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Ehd4Q9EQP2 541 aa17.66■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Ing2Q9ESK4 281 aa17.66■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Med14A2ABV5 1459 aaKnown RBP17.66■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Myo1dQ5SYD0 1006 aa17.66■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Dnajc3Q91YW3 504 aa17.66■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Pdcd11Q6NS46 1862 aaKnown RBP17.66■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Nccrp1G3X9C2 266 aa17.66■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 FcgrtQ61559 365 aa17.66■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Trmt112Q9DCG9 125 aa17.66■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Col1a2Q01149 1372 aa17.66■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Gimd1E9PW74 217 aa17.66■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Ppm1kQ8BXN7 372 aa17.66■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 RecqlQ9Z129 648 aa17.66■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 LRWD1Q8BUI3 648 aaKnown RBP17.66■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Cdkl2Q9QUK0 568 aa17.66■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Sec24cG3X972 1096 aaKnown RBP17.66■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Gm13103Q4VAD2 491 aa17.66■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Tbc1d1Q60949 1255 aa17.66■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Serpina3bQ8BYY9 420 aa17.66■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Anxa13Q99JG3 317 aa17.66■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Gm10354K7N6A0 256 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Phldb3E9QAF4 648 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 IqcmQ149I8 489 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 RetsatQ64FW2 609 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Nol6Q8R5K4 1152 aaKnown RBP17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Gtf2iQ9ESZ8 998 aaKnown RBP17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Prss51A0A286YDY8 319 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 6030498E09RikB1AX85 169 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Abce1P61222 599 aaKnown RBP17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Gsdmc4Q3TR54 480 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Usp28Q5I043 1051 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Ephb1Q8CBF3 984 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 S100a9P31725 113 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Sfi1Q3UZY0 1216 aaKnown RBP17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 WhammQ571B6 793 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Lig4Q8BTF7 911 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Fads3Q9JJE7 449 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 MagohP61327 146 aaKnown RBP17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Trpc1Q61056 793 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Apol9bQ8C7I4 310 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Stxbp5Q8K400 1152 aaKnown RBP17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Apol9aQ8VDU3 310 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Trim66Q924W6 1242 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 MagohbQ9CQL1 146 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Gm10639E9Q6L7 222 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Gsta2P10648 222 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Rufy4Q3TYX8 563 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Znf148Q61624 794 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Nlrp4aQ8BU40 982 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Ugp2Q91ZJ5 508 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Dkc1Q9ESX5 509 aaKnown RBP17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Zfp839E9PUU5 921 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Ptk2bQ9QVP9 1009 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Nr2e3Q9QXZ7 395 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Carmil3Q3UFQ8 1375 aa17.65■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Ddx3yQ62095 658 aaKnown RBP17.64■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Spata32Q8C5V0 334 aa17.64■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Ptch1Q61115 1434 aa17.64■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Iqgap1Q9JKF1 1657 aaKnown RBP17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Gm16430A6X8J1 155 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Ece1Q4PZA2 769 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Mroh6V9GX81 722 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Kif24Q6NWW5 1356 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Kat6aQ8BZ21 2003 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 SufuQ9Z0P7 484 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 DtnbO70585 659 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Myl1P05977 188 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Tlr7P58681 1050 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Heatr3Q8BQM4 679 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Yars2Q8BYL4 472 aaKnown RBP17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Strip2Q8C9H6 844 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Fip1l1Q9D824 581 aaKnown RBP17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 DbnlQ62418 436 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Slc1a1P51906 523 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 G3bp2P97379 482 aaKnown RBP17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Mapk6Q61532 720 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Lsm14bQ8CGC4 385 aaKnown RBP17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Rnf31Q924T7 1066 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 C1qtnf1Q9QXP7 281 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Plekhg4A0A1L1SU27 1217 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Pdha1P35486 390 aaKnown RBP17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Trpv6Q91WD2 767 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Pold4Q9CWP8 107 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 TriqkB2B9E1 86 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Ttc17E9PVB5 1198 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Gm5152L7N200 190 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Mif4gdQ3UBZ5 222 aa17.64■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Ap1m1P35585 423 aa17.63■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Nsun7Q14AW5 724 aa17.63■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 CgasQ8C6L5 507 aa17.63■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 GatbQ99JT1 557 aa17.63■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Brpf3B2KF05 1204 aaKnown RBP17.63■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Q3TQQ9 903 aa17.63■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 P3h2Q8CG71 703 aa17.63■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Mrps9Q9D7N3 390 aaKnown RBP17.63■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Gnrh1P13562 90 aa17.63■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms