RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Gja5Q01231 358 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Tspyl5Q69ZB3 406 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Xlr3bQ6P205 226 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 AdalQ80SY6 360 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Mboat7Q8CHK3 473 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 CactinQ9CS00 772 aaKnown RBP20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Ctnnbl1Q9CWL8 563 aaKnown RBP20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 PdhbQ9D051 359 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Jag1Q9QXX0 1218 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Kcnq2Q9Z351 759 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Dnaaf5B9EJR8 853 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Zfp174B9EJW5 407 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Rasal2E9PW37 1286 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Tmod1P49813 359 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Ndufaf2Q59J78 168 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Trim37Q6PCX9 961 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Rps6ka6Q7TPS0 764 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Ift74Q8BKE9 600 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 SucoQ8C341 1250 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Q8C6G1 249 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 CgasQ8C6L5 507 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Pramef12Q9D2F1 463 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Cfap53Q9D439 514 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Nop56Q9D6Z1 580 aaKnown RBP20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 IscuQ9D7P6 168 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Ccdc91Q9D8L5 442 aa20.66■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Zfp984A2A7A2 547 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Stk10O55098 966 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Eif3dO70194 548 aaKnown RBP20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Atp6v1aP50516 617 aaKnown RBP20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Atp8a1P70704 1164 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Psd3Q2PFD7 1037 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Slc2a13Q3UHK1 637 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Kctd16Q5DTY9 427 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Kctd1Q5M956 257 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Retreg2Q6NS82 541 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Tmc3Q7TQ69 1130 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Ppfia2Q8BSS9 1257 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Tbx22Q8K402 517 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Pcdhb5Q91XZ5 792 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Rfc4Q99J62 364 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Lrp2bpQ9D4C6 346 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Fthl17aQ9DAX0 182 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Tfr2Q9JKX3 798 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Gfpt2Q9Z2Z9 682 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Eftud2O08810 971 aaKnown RBP20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Pdk4O70571 412 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Cyp2e1Q05421 493 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Qrich1Q3UA37 777 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Tbc1d9bQ5SVR0 1263 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Celf4Q7TSY6 486 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Phf20Q8BLG0 1010 aaKnown RBP20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 RalylQ8BTF8 293 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Ces4aQ8R0W5 563 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Josd2Q9CR30 188 aa20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Fam133bQ9CVI2 245 aaKnown RBP20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Ddx20Q9JJY4 825 aaKnown RBP20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 Drg2Q9QXB9 364 aaKnown RBP20.65■□□□□ 0.9
Ccdc50-201ENSMUST00000039443 1700016G14RikA0A286YCZ6 238 aa20.64■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Krt8P11679 490 aaKnown RBP20.64■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Lmnb1P14733 588 aaKnown RBP20.64■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 PpatQ8CIH9 517 aa20.64■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Klhl36Q8R124 613 aa20.64■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Pcdha5Q91Y15 934 aa20.64■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Xpo6Q924Z6 1125 aa20.64■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 2310002L09RikQ9D7L5 217 aa20.64■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Entpd5Q9WUZ9 427 aa20.64■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Pacsin2Q9WVE8 486 aaKnown RBP20.64■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 FosP01101 380 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Tgfb2P27090 414 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Psmc6P62334 389 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Trip13Q3UA06 432 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Frmd8Q3UFK8 466 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Q8BGD0 127 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Ttc16Q8C1F5 767 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Usp20Q8C6M1 916 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Champ1Q8K327 802 aaKnown RBP20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Zbed3Q9D0L1 228 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 IvdQ9JHI5 424 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Ankrd2Q9WV06 328 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Itgb4A2A863 1818 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Frmpd3A0A140LIW3 1774 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Lrrc38A2VDH3 298 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Apol8A2VDH7 339 aaKnown RBP20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Krt36B1AQ75 473 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Msh2P43247 935 aaKnown RBP20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Adad1Q5SUE7 619 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Inpp4bQ6P1Y8 924 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Ppm1fQ8CGA0 452 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Ccdc65Q8VHI7 493 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Dqx1Q924H9 718 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Pstpip2Q99M15 334 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Thumpd2Q9CZB3 528 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Rabl3Q9D4V7 236 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Eya4Q9Z191 616 aa20.63■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Tbc1d16A2ABG4 766 aa20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Fam171a1A2ATK9 892 aa20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 R3hdm1E9Q9Q2 1135 aaKnown RBP20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Magea1O89006 320 aa20.62■□□□□ 0.89
Ccdc50-201ENSMUST00000039443 Magea5O89009 320 aa20.62■□□□□ 0.89
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms