RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Rnf34Q99KR6 376 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Kcnh7Q9ER47 1195 aa13.85□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Sbf2E9PXF8 1872 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 1700017N19RikA0A087WPJ1 469 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Cyth3O08967 399 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Itgb5O70309 798 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Polr2fP61219 127 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Cep126Q0VBV7 1103 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Btbd7Q8CFE5 1130 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Hyou1Q9JKR6 999 aaKnown RBP13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 CenphQ9QYM8 241 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Map7d2A2AG50 781 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 H2afzP0C0S6 128 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Ighmbp2P40694 993 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Rnf216P58283 853 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Etv6P97360 485 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 NfibP97863 570 aaKnown RBP13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 H2afvQ3THW5 128 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Gm5935Q497S0 212 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Krt42Q6IFX2 452 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Camkk2Q8C078 588 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Reep2Q8VCD6 254 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Tdrd1Q99MV1 1172 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Npm3Q9CPP0 175 aaKnown RBP13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Drap1Q9D6N5 205 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Prl2b1Q9DAZ2 228 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 IvdQ9JHI5 424 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Hebp1Q9R257 190 aa13.84□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Myh11O08638 1972 aa13.83□□□□□ -0.19
Rnf4-201ENSMUST00000030992 Gucy1b3O54865 620 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Akap2O54931 893 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Cyp11b2P15539 500 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Edem3Q2HXL6 931 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Mier3Q3UHF3 551 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 4933427I04RikQ3V053 235 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Slc51bQ80WK2 128 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Srrm3Q80WV7 648 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Ccdc87Q8CDL9 855 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Defb15Q8R2I5 79 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Chn1Q91V57 459 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Rasgef1cQ9D300 466 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Cdc42ep4Q9JM96 349 aaKnown RBP13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Cntn6Q9JMB8 1028 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Extl3Q9WVL6 918 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Gimap9G3X987 291 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Exoc4O35382 975 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Slc16a2O70324 545 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 DtnbO70585 659 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Lrriq3Q14DL3 633 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Hdhd2Q3UGR5 259 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Krt15Q61414 452 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Senp6Q6P7W0 1132 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Ttc22Q8C159 568 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Rexo2Q9D8S4 237 aa13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Smchd1Q6P5D8 2007 aaKnown RBP13.83□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Oip5A2AQ14 241 aa13.82□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Ccdc78D3Z5T1 437 aa13.82□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Sec24cG3X972 1096 aaKnown RBP13.82□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Spout1Q3UHX9 385 aaKnown RBP13.82□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Sco1Q5SUC9 284 aa13.82□□□□□ -0.2
Rnf4-201ENSMUST00000030992 P4ha1Q60715 534 aa13.82□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Naa15Q80UM3 865 aaKnown RBP13.82□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Zmynd15Q8C0R7 736 aa13.82□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Kiaa0391Q8JZY4 584 aaKnown RBP13.82□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Klhl36Q8R124 613 aa13.82□□□□□ -0.2
Rnf4-201ENSMUST00000030992 NkapQ9D0F4 415 aaKnown RBP13.82□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Gm45261A0A1B0GSP6 197 aa13.82□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Osbpl7A2A716 963 aa13.82□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Wee1P47810 646 aa13.82□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Skap2Q3UND0 358 aa13.82□□□□□ -0.2
Rnf4-201ENSMUST00000030992 E2f5Q61502 335 aa13.82□□□□□ -0.2
Rnf4-201ENSMUST00000030992 IgflQ6B9Z0 140 aa13.82□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Pak2Q8CIN4 524 aa13.82□□□□□ -0.2
Rnf4-201ENSMUST00000030992 P3h4Q8K2B0 443 aa13.82□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Gm45194A0A140LJG2 572 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Heatr4E9Q357 955 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 RargP18911 458 aaKnown RBP13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 ProcP33587 460 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Wnt10bP48614 389 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Surf6P70279 355 aaKnown RBP13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Apba2P98084 750 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Lmntd2Q0VET5 664 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Zfp341Q6PGC9 846 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Rnaseh2bQ80ZV0 308 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Trim6Q8BGE7 488 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 DcakdQ8BHC4 231 aaKnown RBP13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Slc9a9Q8BZ00 644 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 PpatQ8CIH9 517 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 OtoaQ8K561 1137 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Uchl3Q9JKB1 230 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Lamb2Q61292 1799 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Serpinb8O08800 374 aaKnown RBP13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Tnnc1P19123 161 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 AdkP55264 361 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Gdpd4Q3TT99 632 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Klra5Q60652 266 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Dlg4Q62108 724 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Sycp1Q62209 993 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Zbtb7bQ64321 544 aa13.81□□□□□ -0.2
Rnf4-201ENSMUST00000030992 Haus1Q8BHX1 278 aa13.81□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms