RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Eif3j1Q3UGC7 261 aaKnown RBP8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Trappc3lQ4KL14 181 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Ctnna3Q65CL1 895 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Ncoa7Q6DFV7 943 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 NfrkbQ6PIJ4 1296 aaKnown RBP8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Kcnk18Q6VV64 394 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 PrameQ9D4Z5 464 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Lonp2Q9DBN5 852 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Cops5O35864 334 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 HunkO88866 714 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 AgtP11859 477 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Cd68P31996 326 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Mmp14P53690 582 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 MlxipQ2VPU4 917 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Trip13Q3UA06 432 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Kctd19Q562E2 927 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Gpd2Q64521 727 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Tlr11Q6R5P0 926 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Serpinb3dQ6UKZ0 387 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Rps6ka5Q8C050 863 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Olfr390Q8VEZ7 311 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Nmrk1Q91W63 195 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Ranbp17Q99NF8 1088 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Arhgef25Q9CWR0 618 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Znf394Q9Z1D9 521 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Col4a5Q63ZW6 1691 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Stra6O70491 670 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Top1Q04750 767 aaKnown RBP8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Nlrp4cQ3TKR3 982 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Snx25Q3ZT31 840 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Mapk6Q61532 720 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Zfp943Q6NZP4 507 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Pnpla2Q8BJ56 486 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Slc9b1Q8C0X2 565 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Fam20aQ8CID3 541 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Dlk2Q8K1E3 382 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Tesk2Q8VCT9 570 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Pls3Q99K51 630 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Vwa5aQ99KC8 793 aaKnown RBP8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Ppp1r3aQ99MR9 1089 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Dbndd2Q9CRD4 158 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 ChmQ9QXG2 665 aa8.52□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Rnaseh1O70338 285 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Serpina1aP07758 413 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Serpina1bP22599 413 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Lig1P37913 916 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 PklrP53657 574 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Pstpip1P97814 415 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Serpina1cQ00896 412 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Serpina1dQ00897 413 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Lrrc14bQ3UJB3 510 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Rhox12Q4TU81 186 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Lrig2Q52KR2 1054 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Senp5Q6NXL6 749 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Raver2Q7TPD6 673 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Trim65Q8BFW4 522 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Pkn2Q8BWW9 983 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Iws1Q8C1D8 766 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Lrrc45Q8CIM1 670 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Med15Q924H2 789 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Hspbp1Q99P31 357 aaKnown RBP8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Igf2bp3Q9CPN8 579 aaKnown RBP8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Golph3Q9CRA5 298 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 PfasQ5SUR0 1337 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Fbf1A2A870 1173 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Gm10110D3Z5M2 615 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 AunipE9Q6Z5 340 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Nptx2O70340 429 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Mtco1P00397 514 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 StamP70297 548 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Pla2g6P97819 807 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Tcp11Q01755 566 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Mark2Q05512 776 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Tmem63bQ3TWI9 832 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Btg1-ps1Q3V0S2 161 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Btg1-ps2Q3V0X0 161 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Ces1eQ64176 562 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Jade3Q6IE82 823 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Nsun6Q7TS68 476 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Fam49aQ8BHZ0 323 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Btnl9Q8BJE2 536 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Sar1bQ9CQC9 198 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Fthl17aQ9DAX0 182 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Akt3Q9WUA6 479 aa8.51□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Nfx1B1AY10 1114 aaKnown RBP8.5□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 IkbkbO88351 757 aa8.5□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Tgfbrap1Q3UR70 860 aa8.5□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Capn13Q3UW68 665 aa8.5□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Foxd1Q61345 456 aa8.5□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Acad11Q80XL6 779 aa8.5□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Wdr3Q8BHB4 942 aaKnown RBP8.5□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Nop53Q8BK35 484 aaKnown RBP8.5□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 MtrrQ8C1A3 696 aa8.5□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 MafaQ8CF90 359 aa8.5□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 RnpepQ8VCT3 650 aaKnown RBP8.5□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Slc14a1Q8VHL0 384 aa8.5□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Ubxn1Q922Y1 297 aa8.5□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Mov10l1Q99MV5 1187 aa8.5□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Rbbp6P97868 1790 aaKnown RBP8.5□□□□□ -1.05
Ccdc39-201ENSMUST00000029222 Gm3409A0A0G2JE67 319 aa8.5□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms