RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Kiaa1522A2A7S8 1013 aa12.34□□□□□ -0.43
Vps54-201ENSMUST00000006221 Dnajb6O54946 365 aa12.34□□□□□ -0.43
Vps54-201ENSMUST00000006221 Cd68P31996 326 aa12.34□□□□□ -0.43
Vps54-201ENSMUST00000006221 GalcP54818 684 aa12.34□□□□□ -0.43
Vps54-201ENSMUST00000006221 Cul4aQ3TCH7 759 aa12.34□□□□□ -0.43
Vps54-201ENSMUST00000006221 Fbxw10Q5SUS0 1030 aa12.34□□□□□ -0.43
Vps54-201ENSMUST00000006221 IarsQ8BU30 1262 aa12.34□□□□□ -0.43
Vps54-201ENSMUST00000006221 Riox2Q8CD15 465 aa12.34□□□□□ -0.43
Vps54-201ENSMUST00000006221 Dnajc28Q8VCE1 385 aa12.34□□□□□ -0.43
Vps54-201ENSMUST00000006221 Sf3a3Q9D554 501 aaKnown RBP12.34□□□□□ -0.43
Vps54-201ENSMUST00000006221 Sema6bO54951 886 aa12.33□□□□□ -0.43
Vps54-201ENSMUST00000006221 Epha3P29319 983 aa12.33□□□□□ -0.43
Vps54-201ENSMUST00000006221 Nap1l4Q78ZA7 375 aaKnown RBP12.33□□□□□ -0.43
Vps54-201ENSMUST00000006221 BlmhQ8R016 455 aa12.33□□□□□ -0.43
Vps54-201ENSMUST00000006221 Cbwd1Q8VEH6 393 aa12.33□□□□□ -0.43
Vps54-201ENSMUST00000006221 Znf704Q9ERQ3 566 aa12.33□□□□□ -0.43
Vps54-201ENSMUST00000006221 IvdQ9JHI5 424 aa12.33□□□□□ -0.43
Vps54-201ENSMUST00000006221 Ace3D0G895 737 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Trim55G3X8Y1 545 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Usp17ldG5E8G2 545 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Usp17lcG5E8I7 545 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Etv6P97360 485 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Scfd1Q8BRF7 639 aaKnown RBP12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Acat1Q8QZT1 424 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Ergic2Q9CR89 377 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Actn2Q9JI91 894 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Myoz2Q9JJW5 264 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 DohhA0A1Y7VJ29 135 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Usp31E9Q6Y8 1344 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Hspa1lP16627 641 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Pkn1P70268 946 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Krt15Q61414 452 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Q6PD19 689 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 AdalQ80SY6 360 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 3830417A13RikQ8BQJ2 303 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 PlekQ9JHK5 350 aaKnown RBP12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Fam171a1A2ATK9 892 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Ncf2O70145 525 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Rnaseh1O70338 285 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Xrcc6P23475 608 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Dlg4Q62108 724 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Pja2Q80U04 707 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Znf771Q8BJ90 317 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Btbd7Q8CFE5 1130 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Calml4Q91WQ9 153 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Slc12a6Q924N4 1150 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Klc4Q9DBS5 619 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Eya4Q9Z191 616 aa12.33□□□□□ -0.44
Vps54-201ENSMUST00000006221 Nova2D3YVV7 556 aaKnown RBP12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Ifi207E9Q3L4 978 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Gimap9G3X987 291 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Hoxa11P31311 313 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Rpl13P47963 211 aaKnown RBP12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Wdr44Q6NVE8 915 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Fam228aQ8CDW1 299 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Nup58Q8R332 587 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Gkap1Q9JMB0 366 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Hnrnph2P70333 449 aaKnown RBP12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Atp8a1P70704 1164 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 TbataQ7TSD4 393 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Rasgef1cQ9D300 466 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Fthl17aQ9DAX0 182 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Cpne8Q9DC53 577 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Plxnb2B2RXS4 1842 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Sclt1G5E861 688 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 ItgaeQ60677 1167 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 PicalmQ7M6Y3 660 aaKnown RBP12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Erlin2Q8BFZ9 340 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Psmd5Q8BJY1 504 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Gcfc2Q8BKT3 769 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Scfd2Q8BTY8 684 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 CrygnQ8VHL5 183 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Slc25a38Q91XD8 326 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Ebag9Q9D0V7 213 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 4921524L21RikQ9D5T2 438 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Cul1Q9WTX6 776 aa12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Gys1Q9Z1E4 738 aaKnown RBP12.32□□□□□ -0.44
Vps54-201ENSMUST00000006221 Gm4907B1AXB9 411 aa12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 Sema3eP70275 775 aa12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 Sox13Q04891 613 aa12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 Ccdc113Q8C5T8 377 aa12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 Atp6v0a4Q920R6 833 aa12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 Pabpc6Q9D4E6 643 aaKnown RBP12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 Cse1lQ9ERK4 971 aaKnown RBP12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 Edf1Q9JMG1 148 aaKnown RBP12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 Stat2Q9WVL2 923 aa12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 Heatr4E9Q357 955 aa12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 MagohP61327 146 aaKnown RBP12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 Spata18Q0P557 537 aa12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 Prr7Q3V0I2 269 aa12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 Brd2Q7JJ13 798 aaKnown RBP12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 Ints2Q80UK8 1198 aa12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 DcakdQ8BHC4 231 aaKnown RBP12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 HhatQ8BMT9 499 aa12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 Tbc1d10cQ8C9V1 444 aa12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 MagohbQ9CQL1 146 aa12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 Ccdc78D3Z5T1 437 aa12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 Hnrnph1O35737 449 aaKnown RBP12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 Parp2O88554 559 aa12.31□□□□□ -0.44
Vps54-201ENSMUST00000006221 Fgfr4Q03142 799 aa12.31□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms