RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Depdc1bQ8BH88 529 aa13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 IscuQ9D7P6 168 aa13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Scn4aQ9ER60 1841 aa13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Casp8O89110 480 aa13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Wfs1P56695 890 aa13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 SpertQ32MG2 446 aa13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Qrich1Q3UA37 777 aa13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 HnrnpdQ60668 355 aaKnown RBP13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Retreg2Q6NS82 541 aa13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Foxo6Q70KY4 559 aa13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Llgl1Q80Y17 1036 aa13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 OtoaQ8K561 1137 aa13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Drap1Q9D6N5 205 aa13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Cse1lQ9ERK4 971 aaKnown RBP13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Gm5737A0A140LI11 423 aa13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Trappc11B2RXC1 1133 aa13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Cul4aQ3TCH7 759 aa13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Phactr4Q501J7 694 aa13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Swap70Q6A028 585 aaKnown RBP13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Trim37Q6PCX9 961 aa13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Ttc16Q8C1F5 767 aa13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 SucoQ8C341 1250 aa13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 PlekQ9JHK5 350 aaKnown RBP13.03□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Gm45261A0A1B0GSP6 197 aa13.02□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Gm6588E9Q3K0 461 aa13.02□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Serpinb1cQ5SV42 375 aa13.02□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Glg1Q61543 1175 aaKnown RBP13.02□□□□□ -0.32
Rfx1-201ENSMUST00000005600 GmipQ6PGG2 971 aa13.02□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Rassf6Q80UQ2 353 aa13.02□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Atp6v1e2Q9D593 226 aa13.02□□□□□ -0.32
Rfx1-201ENSMUST00000005600 PpihQ9D868 188 aa13.02□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Fthl17aQ9DAX0 182 aa13.02□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Gtf2iQ9ESZ8 998 aaKnown RBP13.02□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Uchl3Q9JKB1 230 aa13.02□□□□□ -0.32
Rfx1-201ENSMUST00000005600 MtrA6H5Y3 1253 aa13.02□□□□□ -0.32
Rfx1-201ENSMUST00000005600 PtenO08586 403 aa13.02□□□□□ -0.32
Rfx1-201ENSMUST00000005600 BC051142Q3V0M8 400 aa13.02□□□□□ -0.32
Rfx1-201ENSMUST00000005600 PolrmtQ8BKF1 1207 aaKnown RBP13.02□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Gimap4Q99JY3 219 aa13.02□□□□□ -0.32
Rfx1-201ENSMUST00000005600 Kiaa1522A2A7S8 1013 aa13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Vps33bP59016 617 aa13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Cyp2e1Q05421 493 aa13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Kctd19Q562E2 927 aa13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Ndufaf2Q59J78 168 aa13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Elf1Q60775 612 aa13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Oca2Q62052 833 aa13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Lman1Q9D0F3 517 aa13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Armc9Q9D2I5 817 aa13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Gm28360A0A087WR25 190 aa13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Apol8A2VDH7 339 aaKnown RBP13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Traf5P70191 558 aa13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Gm10488Q4KL05 212 aa13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 A1cfQ5YD48 595 aa13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Foxd1Q61345 456 aa13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Fmnl3Q6ZPF4 1028 aa13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Gcfc2Q8BKT3 769 aa13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 L3mbtl3Q8BLB7 883 aa13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Usp20Q8C6M1 916 aa13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Vps52Q8C754 723 aaKnown RBP13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Themis2Q91YX0 663 aa13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 SufuQ9Z0P7 484 aa13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Flt1P35969 1333 aa13.02□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Slc35g2D3YVE8 412 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Diaph2O70566 1098 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Art2aP17981 287 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Map2k1P31938 393 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 GnptabQ69ZN6 1235 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Atxn2lQ7TQH0 1049 aaKnown RBP13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 BC048507Q80ZS7 89 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Commd10Q8JZY2 202 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Ergic2Q9CR89 377 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Arhgef7Q9ES28 862 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Lrrc74aA0A1Y7VMD6 494 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Gimap9G3X987 291 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Trmt1Q3TX08 663 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Ccdc84Q4VA36 332 aaKnown RBP13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Mtus1Q5HZI1 1210 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Ttf2Q5NC05 1138 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Nr2e1Q64104 385 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Fam196bQ6GQV1 535 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Rps6ka6Q7TPS0 764 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Ccdc65Q8VHI7 493 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Grtp1Q9D3N8 359 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Capn12Q9ER56 720 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Stk4Q9JI11 487 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Eif2ak1Q9Z2R9 619 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Znf367Q0VDT2 340 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Syne3Q4FZC9 975 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 WaplQ65Z40 1200 aaKnown RBP13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Tarsl2Q8BLY2 790 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Shtn1Q8K2Q9 631 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Trpm8Q8R4D5 1104 aa13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Pdxdc1Q99K01 787 aaKnown RBP13.01□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Zfy1P10925 782 aa13□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Taok1Q5F2E8 1001 aa13□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Scnn1aQ61180 699 aa13□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Six2Q62232 296 aa13□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Sh3d21Q7TSG5 549 aa13□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Ybx3Q9JKB3 361 aaKnown RBP13□□□□□ -0.33
Rfx1-201ENSMUST00000005600 Vav3Q9R0C8 847 aa13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms