RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDE1	YPL110C	YER085C	P40058	173 aa		4.26	□□□□□ -1.73
GDE1	YPL110C	RPA34	P47006	233 aa	Predicted RBP	4.26	□□□□□ -1.73
GDE1	YPL110C	MTC3	P53077	123 aa		4.26	□□□□□ -1.73
GDE1	YPL110C	MRH4	P53166	561 aa		4.26	□□□□□ -1.73
GDE1	YPL110C	AIM32	Q04689	311 aa		4.26	□□□□□ -1.73
GDE1	YPL110C	PSY3	Q12318	242 aa		4.26	□□□□□ -1.73
GDE1	YPL110C	HRT3	Q12347	344 aa		4.26	□□□□□ -1.73
GDE1	YPL110C	ADH2	P00331	348 aa	Known RBP	4.26	□□□□□ -1.73
GDE1	YPL110C	ATP2	P00830	511 aa	Known RBP	4.26	□□□□□ -1.73
GDE1	YPL110C	AI3	P03877	415 aa		4.26	□□□□□ -1.73
GDE1	YPL110C	SNF3	P10870	884 aa		4.26	□□□□□ -1.73
GDE1	YPL110C	SEC12	P11655	471 aa		4.26	□□□□□ -1.73
GDE1	YPL110C	CHA1	P25379	360 aa	Known RBP	4.26	□□□□□ -1.73
GDE1	YPL110C	SIP1	P32578	815 aa		4.26	□□□□□ -1.73
GDE1	YPL110C	SFB3	P38810	929 aa		4.26	□□□□□ -1.73
GDE1	YPL110C	FET3	P38993	636 aa		4.26	□□□□□ -1.73
GDE1	YPL110C	GSM1	P42950	618 aa		4.26	□□□□□ -1.73
GDE1	YPL110C	IRC18	P47056	224 aa		4.26	□□□□□ -1.73
GDE1	YPL110C	SUT1	P53032	299 aa	Known RBP	4.26	□□□□□ -1.73
GDE1	YPL110C	TPN1	P53099	579 aa		4.26	□□□□□ -1.73
GDE1	YPL110C	COQ6	P53318	479 aa		4.26	□□□□□ -1.73
GDE1	YPL110C	OGG1	P53397	376 aa	Predicted RBP	4.26	□□□□□ -1.73
GDE1	YPL110C	OAZ1	Q02803	292 aa		4.26	□□□□□ -1.73
GDE1	YPL110C	MUS81	Q04149	632 aa	Predicted RBP	4.26	□□□□□ -1.73
GDE1	YPL110C	URH1	Q04179	340 aa		4.26	□□□□□ -1.73
GDE1	YPL110C	YLR225C	Q05948	407 aa	Known RBP	4.26	□□□□□ -1.73
GDE1	YPL110C	WIP1	Q2V2P8	89 aa		4.26	□□□□□ -1.73
GDE1	YPL110C	PRC1	P00729	532 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	COX4	P04037	155 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	EXO70	P19658	623 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	TSA1	P34760	196 aa	Known RBP	4.25	□□□□□ -1.73
GDE1	YPL110C	APE3	P37302	537 aa	Known RBP	4.25	□□□□□ -1.73
GDE1	YPL110C	PRP39	P39682	629 aa	Known RBP	4.25	□□□□□ -1.73
GDE1	YPL110C	BDH1	P39714	382 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	VNX1	P42839	908 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	CWC23	P52868	283 aa	Predicted RBP	4.25	□□□□□ -1.73
GDE1	YPL110C	PKP2	P53170	491 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	YGR079W	P53249	370 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	TCO89	Q08921	799 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	YOR022C	Q12204	715 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	RPL35A	P0CX84	120 aa	Known RBP	4.25	□□□□□ -1.73
GDE1	YPL110C	RPL35B	P0CX85	120 aa	Known RBP	4.25	□□□□□ -1.73
GDE1	YPL110C	ERG11	P10614	530 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	CKA1	P15790	372 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	RPT3	P33298	428 aa	Known RBP	4.25	□□□□□ -1.73
GDE1	YPL110C	MAP2	P38174	421 aa	Known RBP	4.25	□□□□□ -1.73
GDE1	YPL110C	RFC4	P40339	323 aa	Known RBP	4.25	□□□□□ -1.73
GDE1	YPL110C	YKE4	P40544	346 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	SSU1	P41930	458 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
GDE1	YPL110C	EKI1	Q03764	534 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	SIZ1	Q04195	904 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	YOR114W	Q12219	294 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	YIR021W-A	Q3E739	70 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	SAS5	Q99314	248 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	FKS1	P38631	1876 aa	Known RBP	4.25	□□□□□ -1.73
GDE1	YPL110C	GAL80	P04387	435 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	SWI5	P08153	709 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	GUK1	P15454	187 aa	Known RBP	4.25	□□□□□ -1.73
GDE1	YPL110C	EXG1	P23776	448 aa	Known RBP	4.25	□□□□□ -1.73
GDE1	YPL110C	YKL071W	P36086	256 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	HEM14	P40012	539 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	PFA3	P42836	336 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	ARC1	P46672	376 aa	Known RBP	4.25	□□□□□ -1.73
GDE1	YPL110C	HOC1	P47124	396 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	PPT1	P53043	513 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	NQM1	P53228	333 aa	Predicted RBP	4.25	□□□□□ -1.73
GDE1	YPL110C	STP1	Q00947	519 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	RSC9	Q03124	581 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	GIS1	Q03833	894 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	YLR297W	Q05899	129 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	CTS2	Q06350	511 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	IWR1	Q07532	353 aa	Predicted RBP	4.25	□□□□□ -1.73
GDE1	YPL110C	SPC3	Q12133	184 aa		4.25	□□□□□ -1.73
GDE1	YPL110C	TRP4	P07285	380 aa	Predicted RBP	4.24	□□□□□ -1.73
GDE1	YPL110C	RPS21A	P0C0V8	87 aa	Known RBP	4.24	□□□□□ -1.73
GDE1	YPL110C	RPS18A	P0CX55	146 aa	Known RBP	4.24	□□□□□ -1.73
GDE1	YPL110C	RPS18B	P0CX56	146 aa	Predicted RBP	4.24	□□□□□ -1.73
GDE1	YPL110C	YFL068W	P0CX99	160 aa		4.24	□□□□□ -1.73
GDE1	YPL110C	YLL066W-A	P0CY00	160 aa		4.24	□□□□□ -1.73
GDE1	YPL110C	YLL067W-A	P0CY01	160 aa		4.24	□□□□□ -1.73
GDE1	YPL110C	SPO12	P17123	173 aa		4.24	□□□□□ -1.73
GDE1	YPL110C	ERD2	P18414	219 aa		4.24	□□□□□ -1.73
GDE1	YPL110C	YEL068C	P39977	110 aa		4.24	□□□□□ -1.73
GDE1	YPL110C	YIL024C	P40543	189 aa		4.24	□□□□□ -1.73
GDE1	YPL110C	YJL045W	P47052	634 aa		4.24	□□□□□ -1.73
GDE1	YPL110C	PET130	P47065	347 aa		4.24	□□□□□ -1.73
GDE1	YPL110C	MOD5	P07884	428 aa		4.24	□□□□□ -1.73
GDE1	YPL110C	CDC20	P26309	610 aa		4.24	□□□□□ -1.73
GDE1	YPL110C	TCD2	P36101	447 aa	Known RBP	4.24	□□□□□ -1.73
GDE1	YPL110C	YHR097C	P38809	366 aa	Known RBP	4.24	□□□□□ -1.73
GDE1	YPL110C	YMR147W	P40218	223 aa	Known RBP	4.24	□□□□□ -1.73
GDE1	YPL110C	OTU1	P43558	301 aa		4.24	□□□□□ -1.73
GDE1	YPL110C	GUF1	P46943	645 aa		4.24	□□□□□ -1.73
GDE1	YPL110C	DIG2	Q03373	323 aa	Known RBP	4.24	□□□□□ -1.73
GDE1	YPL110C	RKM2	Q03942	479 aa		4.24	□□□□□ -1.73
GDE1	YPL110C	EMG1	Q06287	252 aa	Known RBP	4.24	□□□□□ -1.73
GDE1	YPL110C	DCP1	Q12517	231 aa	Predicted RBP	4.24	□□□□□ -1.73
GDE1	YPL110C	YBR085C-A	O43137	85 aa		4.24	□□□□□ -1.73
GDE1	YPL110C	REP2	P03872	296 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms