RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W CDH1P53197 566 aa4.69□□□□□ -1.66
LDB18YLL049W DUG3P53871 357 aa4.69□□□□□ -1.66
LDB18YLL049W YNL140CP53910 189 aa4.69□□□□□ -1.66
LDB18YLL049W RHO4Q00246 291 aa4.69□□□□□ -1.66
LDB18YLL049W YMR027WQ04371 470 aa4.69□□□□□ -1.66
LDB18YLL049W ERB1Q04660 807 aaKnown RBP4.69□□□□□ -1.66
LDB18YLL049W YPR196WQ06595 470 aa4.69□□□□□ -1.66
LDB18YLL049W RAF1Q06891 181 aa4.69□□□□□ -1.66
LDB18YLL049W GPB1Q08886 897 aa4.69□□□□□ -1.66
LDB18YLL049W CHS5Q12114 671 aaKnown RBP4.69□□□□□ -1.66
LDB18YLL049W KCS1Q12494 1050 aa4.69□□□□□ -1.66
LDB18YLL049W YER145C-AA0A023PYF4 145 aa4.68□□□□□ -1.66
LDB18YLL049W GPH1P06738 902 aaKnown RBP4.68□□□□□ -1.66
LDB18YLL049W ADE5,7P07244 802 aaKnown RBP4.68□□□□□ -1.66
LDB18YLL049W ENA1P13587 1091 aa4.68□□□□□ -1.66
LDB18YLL049W PBN1P25580 416 aa4.68□□□□□ -1.66
LDB18YLL049W YCR090CP25654 182 aaKnown RBP4.68□□□□□ -1.66
LDB18YLL049W RPB9P27999 122 aa4.68□□□□□ -1.66
LDB18YLL049W DAL3P32459 195 aa4.68□□□□□ -1.66
LDB18YLL049W HIR2P32480 875 aa4.68□□□□□ -1.66
LDB18YLL049W GCG1P32656 232 aaKnown RBP4.68□□□□□ -1.66
LDB18YLL049W SPO23P33757 523 aa4.68□□□□□ -1.66
LDB18YLL049W YHL012WP38709 493 aa4.68□□□□□ -1.66
LDB18YLL049W MTC6P38849 526 aa4.68□□□□□ -1.66
LDB18YLL049W COA1P40452 197 aa4.68□□□□□ -1.66
LDB18YLL049W RLP7P40693 322 aaKnown RBP4.68□□□□□ -1.66
LDB18YLL049W QRI1P43123 477 aaKnown RBP4.68□□□□□ -1.66
LDB18YLL049W MSY1P48527 492 aa4.68□□□□□ -1.66
LDB18YLL049W ENA2Q01896 1091 aa4.68□□□□□ -1.66
LDB18YLL049W URH1Q04179 340 aa4.68□□□□□ -1.66
LDB18YLL049W RRB1Q04225 511 aaKnown RBP4.68□□□□□ -1.66
LDB18YLL049W BUD22Q04347 519 aaKnown RBP4.68□□□□□ -1.66
LDB18YLL049W YET3Q07451 203 aa4.68□□□□□ -1.66
LDB18YLL049W YVC1Q12324 675 aa4.68□□□□□ -1.66
LDB18YLL049W ENA5Q12691 1091 aa4.68□□□□□ -1.66
LDB18YLL049W YKL033W-AQ86ZR7 236 aa4.68□□□□□ -1.66
LDB18YLL049W CBS2P14905 389 aa4.67□□□□□ -1.66
LDB18YLL049W NCP1P16603 691 aaKnown RBP4.67□□□□□ -1.66
LDB18YLL049W SPO16P17122 198 aa4.67□□□□□ -1.66
LDB18YLL049W RPB5P20434 215 aa4.67□□□□□ -1.66
LDB18YLL049W DBF2P22204 572 aa4.67□□□□□ -1.66
LDB18YLL049W RFA1P22336 621 aaKnown RBP4.67□□□□□ -1.66
LDB18YLL049W YCL002CP25565 263 aa4.67□□□□□ -1.66
LDB18YLL049W KAR4P25583 335 aa4.67□□□□□ -1.66
LDB18YLL049W COX13P32799 129 aa4.67□□□□□ -1.66
LDB18YLL049W YKL102CP34249 101 aa4.67□□□□□ -1.66
LDB18YLL049W VPS21P36017 210 aaKnown RBP4.67□□□□□ -1.66
LDB18YLL049W ETR1P38071 380 aa4.67□□□□□ -1.66
LDB18YLL049W ATG7P38862 630 aa4.67□□□□□ -1.66
LDB18YLL049W YHR177WP38867 453 aa4.67□□□□□ -1.66
LDB18YLL049W YER010CP40011 234 aa4.67□□□□□ -1.66
LDB18YLL049W UBC9P50623 157 aaPredicted RBP4.67□□□□□ -1.66
LDB18YLL049W TAF6P53040 516 aa4.67□□□□□ -1.66
LDB18YLL049W ZIP2P53061 704 aa4.67□□□□□ -1.66
LDB18YLL049W OGG1P53397 376 aaPredicted RBP4.67□□□□□ -1.66
LDB18YLL049W NCE101Q02820 53 aa4.67□□□□□ -1.66
LDB18YLL049W RNY1Q02933 434 aaKnown RBP4.67□□□□□ -1.66
LDB18YLL049W MET31Q03081 177 aa4.67□□□□□ -1.66
LDB18YLL049W YDR249CQ03787 373 aa4.67□□□□□ -1.66
LDB18YLL049W YMR155WQ03795 547 aa4.67□□□□□ -1.66
LDB18YLL049W LRS4Q04087 347 aaKnown RBP4.67□□□□□ -1.66
LDB18YLL049W MLC2Q06580 163 aa4.67□□□□□ -1.66
LDB18YLL049W SWM1Q12379 170 aa4.67□□□□□ -1.66
LDB18YLL049W YBR182C-AQ8TGU6 64 aa4.67□□□□□ -1.66
LDB18YLL049W RGS2Q99188 309 aa4.67□□□□□ -1.66
LDB18YLL049W DIF1O13577 133 aa4.66□□□□□ -1.66
LDB18YLL049W ALG7P07286 448 aa4.66□□□□□ -1.66
LDB18YLL049W RNA1P11745 407 aaKnown RBP4.66□□□□□ -1.66
LDB18YLL049W TFS1P14306 219 aa4.66□□□□□ -1.66
LDB18YLL049W SAM35P14693 329 aa4.66□□□□□ -1.66
LDB18YLL049W NUP1P20676 1076 aa4.66□□□□□ -1.66
LDB18YLL049W MDH2P22133 377 aa4.66□□□□□ -1.66
LDB18YLL049W DBF20P32328 564 aa4.66□□□□□ -1.66
LDB18YLL049W MFT1P33441 392 aaKnown RBP4.66□□□□□ -1.66
LDB18YLL049W PTH2P34222 208 aa4.66□□□□□ -1.66
LDB18YLL049W REV7P38927 245 aa4.66□□□□□ -1.66
LDB18YLL049W YHB1P39676 399 aaKnown RBP4.66□□□□□ -1.66
LDB18YLL049W RIC1P40395 1056 aa4.66□□□□□ -1.66
LDB18YLL049W AIM22P47051 409 aa4.66□□□□□ -1.66
LDB18YLL049W HOS2P53096 452 aaPredicted RBP4.66□□□□□ -1.66
LDB18YLL049W SVL3Q03088 825 aaKnown RBP4.66□□□□□ -1.66
LDB18YLL049W YML131WQ03102 365 aa4.66□□□□□ -1.66
LDB18YLL049W YMR209CQ03648 457 aa4.66□□□□□ -1.66
LDB18YLL049W MRPL1Q04599 285 aa4.66□□□□□ -1.66
LDB18YLL049W YMR310CQ04867 317 aaPredicted RBP4.66□□□□□ -1.66
LDB18YLL049W FDH1Q08911 376 aa4.66□□□□□ -1.66
LDB18YLL049W GET4Q12125 312 aa4.66□□□□□ -1.66
LDB18YLL049W YPR053CQ6Q5F3 151 aa4.66□□□□□ -1.66
LDB18YLL049W CAR1P00812 333 aaKnown RBP4.65□□□□□ -1.67
LDB18YLL049W CBS1P14066 229 aa4.65□□□□□ -1.67
LDB18YLL049W RAD51P25454 400 aa4.65□□□□□ -1.67
LDB18YLL049W MRPL39P36533 70 aa4.65□□□□□ -1.67
LDB18YLL049W YCR087C-AP37263 153 aa4.65□□□□□ -1.67
LDB18YLL049W AIM2P39721 246 aa4.65□□□□□ -1.67
LDB18YLL049W SSP120P39931 234 aaKnown RBP4.65□□□□□ -1.67
LDB18YLL049W AXL1P40851 1208 aa4.65□□□□□ -1.67
LDB18YLL049W ARF3P40994 183 aaRIP-Chip data4.65□□□□□ -1.67not detected
LDB18YLL049W ECL1P48235 211 aa4.65□□□□□ -1.67
LDB18YLL049W SLD3P53135 668 aa4.65□□□□□ -1.67
LDB18YLL049W MNT4P53745 580 aa4.65□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms